Cow genome map

Conread name: rsin04_e10.y1

Conread position: 1-121
Cow position: chr1:33717038-33717165 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-127
Cow position: chr1:56413703-56413572 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1-130
Cow position: chr1:69445187-69445310 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 1-137
Cow position: chr1:15627824-15627962 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 17

Conread position: 1-138
Cow position: chr1:7449949-7450084 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 28

Conread position: 1-141
Cow position: chr1:30504287-30504428 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 119
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 73

Conread position: 1-142
Cow position: chr1:6077711-6077857 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 76

Conread position: 1-143
Cow position: chr1:19545283-19545140 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 75

Conread position: 1-143
Cow position: chr1:44136645-44136507 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1-150
Cow position: chr1:89395409-89395567 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-150
Cow position: chr1:97806605-97806754 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 74

Conread position: 1-151
Cow position: chr1:56711805-56711652 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 17

Conread position: 1-152
Cow position: chr1:49753747-49753896 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 72

Conread position: 1-153
Cow position: chr1:18697536-18697378 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 145

Conread position: 1-153
Cow position: chr1:52329712-52329559 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 30

Conread position: 1-153
Cow position: chr1:78794919-78794773 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 98

Conread position: 1-154
Cow position: chr1:98708259-98708410 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 1-155
Cow position: chr1:12596085-12595933 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-155
Cow position: chr1:41004551-41004392 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 79

Conread position: 1-155
Cow position: chr1:53613376-53613225 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 17

Conread position: 1-156
Cow position: chr1:22628821-22628668 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 10

Conread position: 1-156
Cow position: chr1:57698637-57698476 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 55, 103

Conread position: 1-156
Cow position: chr1:69941148-69940995 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 1-157
Cow position: chr1:50679469-50679311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 58

Conread position: 1-158
Cow position: chr1:56748406-56748568 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 1-158
Cow position: chr1:98619022-98619185 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 112

Conread position: 1-159
Cow position: chr1:25886258-25886104 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 75

Conread position: 1-161
Cow position: chr1:342328-342164 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 45

Conread position: 1-161
Cow position: chr1:22467747-22467909 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 30

Conread position: 1-161
Cow position: chr1:29671707-29671547 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 111

Conread position: 1-161
Cow position: chr1:102113292-102113129 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 78

Conread position: 1-162
Cow position: chr1:81472696-81472851 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-163
Cow position: chr1:8532399-8532233 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 1-163
Cow position: chr1:24413256-24413424 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 75

Conread position: 1-163
Cow position: chr1:45673527-45673688 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 45

Conread position: 1-163
Cow position: chr1:46940045-46939879 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 27

Conread position: 1-163
Cow position: chr1:79590917-79591086 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 1-163
Cow position: chr1:100512412-100512577 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 152

Conread position: 1-164
Cow position: chr1:1877844-1878009 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 111

Conread position: 1-164
Cow position: chr1:14379714-14379555 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1-164
Cow position: chr1:67821393-67821231 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 24

Conread position: 1-166
Cow position: chr1:5394054-5393890 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 45

Conread position: 1-166
Cow position: chr1:51628685-51628516 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 104

Conread position: 1-166
Cow position: chr1:83982559-83982389 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 34

Conread position: 1-166
Cow position: chr1:92370545-92370378 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 103

Conread position: 1-167
Cow position: chr1:36874831-36874996 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 69

Conread position: 1-170
Cow position: chr1:98380760-98380588 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 161

Conread position: 1-174
Cow position: chr1:81363808-81363983 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 22

Conread position: 1-175
Cow position: chr1:33331272-33331092 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 75

Conread position: 1-177
Cow position: chr1:81180163-81179983 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 162

Conread position: 1-178
Cow position: chr1:27114484-27114652 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 1-181
Cow position: chr1:33719930-33720120 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 134

Conread position: 1-181
Cow position: chr1:101822681-101822503 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 30

Conread position: 1-182
Cow position: chr1:24528782-24528618 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-183
Cow position: chr1:3776797-3776615 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 45

Conread position: 1-183
Cow position: chr1:19998219-19998038 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 74

Conread position: 1-183
Cow position: chr1:34000722-34000915 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 1-183
Cow position: chr1:47884016-47883813 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-184
Cow position: chr1:666177-666371 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 32

Conread position: 1-184
Cow position: chr1:3035176-3034994 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 74

Conread position: 1-184
Cow position: chr1:3137749-3137931 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 77, 25

Conread position: 1-184
Cow position: chr1:5873155-5872962 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-184
Cow position: chr1:15311685-15311868 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 101

Conread position: 1-184
Cow position: chr1:24597469-24597662 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 57

Conread position: 1-184
Cow position: chr1:27145837-27145646 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 83

Conread position: 1-184
Cow position: chr1:32013773-32013959 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 1-184
Cow position: chr1:55194647-55194463 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 25

Conread position: 1-184
Cow position: chr1:61725296-61725109 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 76

Conread position: 1-184
Cow position: chr1:75967253-75967436 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 153, 22

Conread position: 1-184
Cow position: chr1:78783363-78783553 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 119

Conread position: 1-184
Cow position: chr1:79663849-79663668 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 93

Conread position: 1-184
Cow position: chr1:84240716-84240897 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 32

Conread position: 1-184
Cow position: chr1:89082924-89083110 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 39

Conread position: 1-184
Cow position: chr1:95056872-95057059 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 74

Conread position: 1-184
Cow position: chr1:98557967-98557779 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 124

Conread position: 1-184
Cow position: chr1:100705949-100706136 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 30

Conread position: 1-190
Cow position: chr1:89438119-89437934 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 74

Conread position: 1-191
Cow position: chr1:772006-771813 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 30

Conread position: 1-193
Cow position: chr1:3243755-3243951 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 149, 0

Conread position: 1-193
Cow position: chr1:5409797-5409600 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 1-193
Cow position: chr1:11873540-11873348 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 152, 40

Conread position: 1-193
Cow position: chr1:24655776-24655971 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 32

Conread position: 1-193
Cow position: chr1:31341237-31341040 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 153

Conread position: 1-193
Cow position: chr1:31845844-31846038 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 90

Conread position: 1-193
Cow position: chr1:56674313-56674113 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 105

Conread position: 1-193
Cow position: chr1:68282613-68282805 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 147

Conread position: 1-193
Cow position: chr1:68995988-68996195 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-193
Cow position: chr1:76470476-76470668 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 23

Conread position: 1-193
Cow position: chr1:78154908-78154708 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 40

Conread position: 1-193
Cow position: chr1:83593991-83593795 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 22

Conread position: 1-193
Cow position: chr1:98372445-98372647 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 125

Conread position: 1-193
Cow position: chr1:99637963-99637765 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 125

Conread position: 1-198
Cow position: chr1:91142340-91142134 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 140

Conread position: 1-202
Cow position: chr1:56657855-56658055 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 25

Conread position: 1-209
Cow position: chr1:3340754-3340967 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 78

Conread position: 1-219
Cow position: chr1:11770477-11770263 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 27

Conread position: 1-219
Cow position: chr1:61391976-61391755 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 54

Conread position: 1-219
Cow position: chr1:82861591-82861810 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 154

Conread position: 1-220
Cow position: chr1:84239290-84239079 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 55

Conread position: 1-221
Cow position: chr1:55135650-55135876 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 79

Conread position: 1-221
Cow position: chr1:82504783-82505007 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 174

Conread position: 1-223
Cow position: chr1:22745443-22745658 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 56

Conread position: 1-223
Cow position: chr1:81470945-81471166 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 78

Conread position: 1-223
Cow position: chr1:88970876-88971088 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 110, 0

Conread position: 1-226
Cow position: chr1:47008847-47009069 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 75

Conread position: 1-229
Cow position: chr1:4573337-4573572 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 73

Conread position: 1-229
Cow position: chr1:11853873-11853646 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 174

Conread position: 1-229
Cow position: chr1:13413843-13414070 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 139

Conread position: 1-229
Cow position: chr1:22448770-22448542 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 79

Conread position: 1-229
Cow position: chr1:43380212-43379985 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 31

Conread position: 1-229
Cow position: chr1:52956076-52956297 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 51

Conread position: 1-229
Cow position: chr1:73561833-73561608 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 120

Conread position: 1-229
Cow position: chr1:74319968-74319737 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 90

Conread position: 1-229
Cow position: chr1:77502963-77502746 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 219, 49

Conread position: 1-230
Cow position: chr1:4691408-4691635 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 16

Conread position: 1-230
Cow position: chr1:37707152-37706930 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 153, 54

Conread position: 1-232
Cow position: chr1:55163739-55163961 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 34

Conread position: 1-232
Cow position: chr1:84786587-84786814 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 76

Conread position: 1-233
Cow position: chr1:43448006-43447786 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 26

Conread position: 1-233
Cow position: chr1:56719133-56719345 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-233
Cow position: chr1:61724208-61723976 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 54

Conread position: 1-234
Cow position: chr1:4290975-4291211 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 194

Conread position: 1-234
Cow position: chr1:44125823-44125591 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 154, 36

Conread position: 1-234
Cow position: chr1:55705437-55705202 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 87

Conread position: 1-234
Cow position: chr1:86578765-86579009 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 31

Conread position: 1-234
Cow position: chr1:90640841-90641080 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 197

Conread position: 1-236
Cow position: chr1:45535518-45535753 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 78

Conread position: 1-237
Cow position: chr1:57396110-57395889 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 30

Conread position: 1-239
Cow position: chr1:10655294-10655531 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 193

Conread position: 1-239
Cow position: chr1:99136614-99136381 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 74

Conread position: 1-240
Cow position: chr1:57635283-57635512 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 30

Conread position: 1-247
Cow position: chr1:71045571-71045811 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 79

Conread position: 1-250
Cow position: chr1:83082818-83083067 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 49

Conread position: 1-251
Cow position: chr1:61564609-61564853 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 76

Conread position: 1-251
Cow position: chr1:100400385-100400132 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 173

Conread position: 1-252
Cow position: chr1:61742647-61742400 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 161

Conread position: 1-253
Cow position: chr1:13895670-13895420 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 162

Conread position: 1-253
Cow position: chr1:55260614-55260373 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 108

Conread position: 1-254
Cow position: chr1:54199567-54199316 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 27

Conread position: 1-255
Cow position: chr1:57639704-57639451 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 57

Conread position: 1-256
Cow position: chr1:82443640-82443390 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 174

Conread position: 1-258
Cow position: chr1:100450368-100450108 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 30

Conread position: 1-261
Cow position: chr1:82884573-82884322 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 74

Conread position: 1-261
Cow position: chr1:90423269-90423012 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 82

Conread position: 1-261
Cow position: chr1:95654899-95654642 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 86

Conread position: 1-262
Cow position: chr1:724551-724811 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 49, 77

Conread position: 1-262
Cow position: chr1:52052887-52052646 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 151, 30

Conread position: 1-262
Cow position: chr1:64189320-64189572 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 156, 33

Conread position: 1-262
Cow position: chr1:79333909-79333650 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 148

Conread position: 1-262
Cow position: chr1:82406736-82406479 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 22

Conread position: 1-263
Cow position: chr1:1165418-1165671 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 102

Conread position: 1-263
Cow position: chr1:7971247-7971484 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 45

Conread position: 1-263
Cow position: chr1:65025074-65025347 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 185

Conread position: 1-263
Cow position: chr1:78091853-78092109 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 27

Conread position: 1-263
Cow position: chr1:89076820-89076561 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 157

Conread position: 1-263
Cow position: chr1:95035539-95035279 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 42

Conread position: 1-263
Cow position: chr1:97820502-97820757 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 86

Conread position: 1-263
Cow position: chr1:100421660-100421897 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 1-264
Cow position: chr1:11226429-11226173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 114

Conread position: 1-264
Cow position: chr1:80899924-80900193 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 158

Conread position: 1-265
Cow position: chr1:47233658-47233404 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 1-265
Cow position: chr1:51654227-51654498 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 247

Conread position: 1-265
Cow position: chr1:68253408-68253668 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 74

Conread position: 1-265
Cow position: chr1:79278629-79278373 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 47

Conread position: 1-265
Cow position: chr1:84906251-84905989 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 47

Conread position: 1-265
Cow position: chr1:93499439-93499695 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 76

Conread position: 1-266
Cow position: chr1:4374522-4374262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 30

Conread position: 1-266
Cow position: chr1:6305052-6304789 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 175

Conread position: 1-266
Cow position: chr1:6941282-6941543 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 1-266
Cow position: chr1:6958695-6958956 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 73

Conread position: 1-266
Cow position: chr1:12464847-12464589 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 1-266
Cow position: chr1:15333694-15333966 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 242

Conread position: 1-266
Cow position: chr1:39069134-39068881 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 155, 32

Conread position: 1-266
Cow position: chr1:40599865-40600120 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 21

Conread position: 1-266
Cow position: chr1:41696871-41697130 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 87

Conread position: 1-266
Cow position: chr1:42174772-42174514 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 40

Conread position: 1-266
Cow position: chr1:42398380-42398116 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 179

Conread position: 1-266
Cow position: chr1:43505340-43505604 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 19

Conread position: 1-266
Cow position: chr1:43872518-43872245 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 78

Conread position: 1-266
Cow position: chr1:44769295-44769034 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 133, 71

Conread position: 1-266
Cow position: chr1:51531590-51531826 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 10

Conread position: 1-266
Cow position: chr1:52994840-52995099 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 78

Conread position: 1-266
Cow position: chr1:53520723-53520986 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 178

Conread position: 1-266
Cow position: chr1:54478141-54478404 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 38, 48

Conread position: 1-266
Cow position: chr1:57900924-57900649 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 76

Conread position: 1-266
Cow position: chr1:74822268-74822522 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 52, 70

Conread position: 1-266
Cow position: chr1:74947310-74947043 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 78

Conread position: 1-266
Cow position: chr1:75382808-75383052 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 76

Conread position: 1-266
Cow position: chr1:81913335-81913080 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 96

Conread position: 1-266
Cow position: chr1:90976266-90976013 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 32

Conread position: 1-266
Cow position: chr1:91039360-91039099 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 112

Conread position: 1-266
Cow position: chr1:91800789-91800525 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 76

Conread position: 1-266
Cow position: chr1:99642553-99642294 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 18, 78

Conread position: 1-267
Cow position: chr1:23488696-23488430 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 190

Conread position: 1-267
Cow position: chr1:33997095-33996848 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-267
Cow position: chr1:63434993-63434730 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 56, 73

Conread position: 1-270
Cow position: chr1:26178998-26178732 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 112

Conread position: 1-270
Cow position: chr1:46693840-46693575 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 108

Conread position: 1-270
Cow position: chr1:56634915-56635177 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 156, 81

Conread position: 1-270
Cow position: chr1:61884732-61884992 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 74

Conread position: 1-270
Cow position: chr1:71643847-71643581 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 134

Conread position: 1-270
Cow position: chr1:86482719-86482983 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 98

Conread position: 1-270
Cow position: chr1:88926563-88926303 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 27

Conread position: 1-270
Cow position: chr1:94875862-94875595 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 175

Conread position: 1-270
Cow position: chr1:95215369-95215111 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 1-270
Cow position: chr1:101634518-101634791 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 25

Conread position: 1-271
Cow position: chr1:4339003-4339270 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 148

Conread position: 1-272
Cow position: chr1:635008-635275 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 103

Conread position: 1-272
Cow position: chr1:3429691-3429428 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 76, 27

Conread position: 1-272
Cow position: chr1:11659460-11659728 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 42

Conread position: 1-272
Cow position: chr1:19465879-19466134 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 1-272
Cow position: chr1:19482256-19482000 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-272
Cow position: chr1:31348093-31347853 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 1-272
Cow position: chr1:31414142-31413891 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-272
Cow position: chr1:81613202-81613470 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 76

Conread position: 1-272
Cow position: chr1:82337968-82337699 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 78

Conread position: 1-272
Cow position: chr1:102647452-102647192 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 113, 32

Conread position: 1-273
Cow position: chr1:1956511-1956252 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 29

Conread position: 1-275
Cow position: chr1:6788473-6788199 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 1-275
Cow position: chr1:13810465-13810731 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 103

Conread position: 1-275
Cow position: chr1:20002419-20002148 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 30

Conread position: 1-275
Cow position: chr1:29627098-29626828 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 96

Conread position: 1-275
Cow position: chr1:31765580-31765289 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 212

Conread position: 1-275
Cow position: chr1:52753349-52753076 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 47

Conread position: 1-275
Cow position: chr1:56477411-56477676 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 26

Conread position: 1-275
Cow position: chr1:60707220-60707487 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 34

Conread position: 1-275
Cow position: chr1:61735622-61735351 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 129

Conread position: 1-275
Cow position: chr1:63138655-63138925 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 150

Conread position: 1-275
Cow position: chr1:63596243-63595970 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 73

Conread position: 1-275
Cow position: chr1:68217542-68217282 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 81

Conread position: 1-275
Cow position: chr1:72103663-72103934 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 131

Conread position: 1-275
Cow position: chr1:85361672-85361935 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 118

Conread position: 1-275
Cow position: chr1:85596761-85597022 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 13

Conread position: 1-275
Cow position: chr1:90864483-90864209 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 172

Conread position: 1-275
Cow position: chr1:91816957-91816687 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 54, 102

Conread position: 1-275
Cow position: chr1:96478512-96478784 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 32

Conread position: 1-277
Cow position: chr1:3323675-3323957 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 18

Conread position: 1-277
Cow position: chr1:4027678-4027949 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 124

Conread position: 1-277
Cow position: chr1:7186604-7186874 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 140

Conread position: 1-277
Cow position: chr1:7442801-7443062 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 1-277
Cow position: chr1:16767268-16767002 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 78

Conread position: 1-277
Cow position: chr1:16962197-16961924 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 177

Conread position: 1-277
Cow position: chr1:21577621-21577895 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 30

Conread position: 1-277
Cow position: chr1:22836219-22836488 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 30

Conread position: 1-277
Cow position: chr1:39418302-39418025 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 54, 22

Conread position: 1-277
Cow position: chr1:42887446-42887191 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-277
Cow position: chr1:63390957-63390679 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 34, 177

Conread position: 1-277
Cow position: chr1:71079140-71078874 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 73

Conread position: 1-277
Cow position: chr1:71295498-71295206 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 78

Conread position: 1-277
Cow position: chr1:86113596-86113314 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 10

Conread position: 1-277
Cow position: chr1:89510116-89509835 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 82

Conread position: 1-277
Cow position: chr1:93110805-93110530 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 74

Conread position: 1-277
Cow position: chr1:94212050-94212313 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 135

Conread position: 1-277
Cow position: chr1:95176752-95177024 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 78

Conread position: 1-277
Cow position: chr1:95687289-95687009 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 120

Conread position: 1-281
Cow position: chr1:71257666-71257375 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 175

Conread position: 1-281
Cow position: chr1:79165274-79164994 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 198

Conread position: 1-283
Cow position: chr1:26201037-26201324 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 51, 30

Conread position: 1-284
Cow position: chr1:100800172-100800446 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 75

Conread position: 1-285
Cow position: chr1:58754968-58754703 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 1-285
Cow position: chr1:68619121-68618837 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 1-285
Cow position: chr1:68763865-68763594 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 74

Conread position: 1-285
Cow position: chr1:73960518-73960794 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 76

Conread position: 1-285
Cow position: chr1:98551529-98551814 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 76

Conread position: 1-286
Cow position: chr1:4414391-4414114 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 58

Conread position: 1-286
Cow position: chr1:16855874-16855605 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 74

Conread position: 1-286
Cow position: chr1:24133239-24132968 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 1-286
Cow position: chr1:24542765-24542475 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 34

Conread position: 1-286
Cow position: chr1:25383479-25383763 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 18

Conread position: 1-286
Cow position: chr1:41056500-41056773 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 73

Conread position: 1-286
Cow position: chr1:43389231-43388957 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 27

Conread position: 1-286
Cow position: chr1:45019987-45019706 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 28

Conread position: 1-286
Cow position: chr1:50931152-50930884 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 148, 10

Conread position: 1-286
Cow position: chr1:51445696-51445981 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 128

Conread position: 1-286
Cow position: chr1:53458523-53458790 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-286
Cow position: chr1:68817982-68817704 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 74

Conread position: 1-286
Cow position: chr1:70538420-70538706 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 48, 78

Conread position: 1-286
Cow position: chr1:78810852-78811133 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 78

Conread position: 1-286
Cow position: chr1:79844285-79844560 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 107, 43

Conread position: 1-286
Cow position: chr1:81355887-81355608 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 30

Conread position: 1-286
Cow position: chr1:81563549-81563840 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 76

Conread position: 1-286
Cow position: chr1:84255571-84255862 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 185

Conread position: 1-286
Cow position: chr1:85028776-85029049 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 22

Conread position: 1-286
Cow position: chr1:85162731-85162452 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 57, 76

Conread position: 1-286
Cow position: chr1:88652447-88652731 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 47

Conread position: 1-286
Cow position: chr1:89342176-89341885 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 159, 50

Conread position: 1-286
Cow position: chr1:93043842-93044112 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 76

Conread position: 1-286
Cow position: chr1:98461107-98461381 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 75

Conread position: 1-286
Cow position: chr1:100393348-100393068 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 76

Conread position: 1-287
Cow position: chr1:11728994-11729271 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 49, 78

Conread position: 1-287
Cow position: chr1:18937017-18936741 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 127

Conread position: 1-287
Cow position: chr1:22728864-22729152 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 78

Conread position: 1-287
Cow position: chr1:28563752-28563473 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 45, 120

Conread position: 1-287
Cow position: chr1:49433448-49433169 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 106

Conread position: 1-287
Cow position: chr1:64251235-64250956 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 39

Conread position: 1-287
Cow position: chr1:75933089-75933362 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 74

Conread position: 1-288
Cow position: chr1:8439-8712 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 111, 0

Conread position: 1-288
Cow position: chr1:3923978-3923703 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 74

Conread position: 1-288
Cow position: chr1:13637854-13637566 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 43

Conread position: 1-288
Cow position: chr1:15547285-15547567 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 163

Conread position: 1-288
Cow position: chr1:19885201-19885478 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 76

Conread position: 1-288
Cow position: chr1:21787143-21787433 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 52, 78

Conread position: 1-288
Cow position: chr1:26702391-26702110 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 75

Conread position: 1-288
Cow position: chr1:28176816-28177101 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 182

Conread position: 1-288
Cow position: chr1:31499444-31499722 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 28

Conread position: 1-288
Cow position: chr1:34159648-34159933 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 143

Conread position: 1-288
Cow position: chr1:35162220-35162507 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 166

Conread position: 1-288
Cow position: chr1:36613458-36613163 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 74

Conread position: 1-288
Cow position: chr1:36931976-36932251 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-288
Cow position: chr1:36998009-36998282 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 125

Conread position: 1-288
Cow position: chr1:39427165-39426908 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 160, 30

Conread position: 1-288
Cow position: chr1:41252586-41252313 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 38

Conread position: 1-288
Cow position: chr1:45289057-45288774 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 67

Conread position: 1-288
Cow position: chr1:51394241-51394515 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 30

Conread position: 1-288
Cow position: chr1:52039453-52039733 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 72

Conread position: 1-288
Cow position: chr1:54156924-54156638 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 22

Conread position: 1-288
Cow position: chr1:55146618-55146895 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 170

Conread position: 1-288
Cow position: chr1:55229801-55230073 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 114

Conread position: 1-288
Cow position: chr1:64678514-64678792 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 76

Conread position: 1-288
Cow position: chr1:64804291-64804005 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 136

Conread position: 1-288
Cow position: chr1:66430113-66430388 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 89

Conread position: 1-288
Cow position: chr1:69264638-69264905 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 148, 21

Conread position: 1-288
Cow position: chr1:69539514-69539788 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 74

Conread position: 1-288
Cow position: chr1:71227893-71228189 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 201

Conread position: 1-288
Cow position: chr1:74940012-74940297 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 162

Conread position: 1-288
Cow position: chr1:74956207-74955924 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 194

Conread position: 1-288
Cow position: chr1:84812120-84811842 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 76

Conread position: 1-288
Cow position: chr1:91066332-91066055 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-288
Cow position: chr1:93810258-93810526 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 125, 31

Conread position: 1-288
Cow position: chr1:94226731-94226458 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 1-288
Cow position: chr1:100551787-100552072 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 45

Conread position: 1-290
Cow position: chr1:21954401-21954124 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 32

Conread position: 1-290
Cow position: chr1:48731012-48730733 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 115

Conread position: 1-291
Cow position: chr1:7350355-7350648 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 51, 78

Conread position: 1-291
Cow position: chr1:10778390-10778663 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 156, 25

Conread position: 1-291
Cow position: chr1:10942275-10941995 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 40

Conread position: 1-291
Cow position: chr1:10964111-10964391 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 40

Conread position: 1-291
Cow position: chr1:11914061-11913778 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 123

Conread position: 1-291
Cow position: chr1:21460684-21460972 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 30

Conread position: 1-291
Cow position: chr1:21955557-21955273 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 168

Conread position: 1-291
Cow position: chr1:31348624-31348337 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 188

Conread position: 1-291
Cow position: chr1:32001504-32001221 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 128

Conread position: 1-291
Cow position: chr1:38278229-38277928 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 190

Conread position: 1-291
Cow position: chr1:40531293-40531003 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 32

Conread position: 1-291
Cow position: chr1:41181661-41181945 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 19

Conread position: 1-291
Cow position: chr1:42256691-42256402 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 163

Conread position: 1-291
Cow position: chr1:43352840-43352556 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 70

Conread position: 1-291
Cow position: chr1:45555180-45555466 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 75

Conread position: 1-291
Cow position: chr1:47658170-47658445 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 1-291
Cow position: chr1:52488146-52487881 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 119

Conread position: 1-291
Cow position: chr1:52496598-52496870 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 137

Conread position: 1-291
Cow position: chr1:54258384-54258666 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 158, 32

Conread position: 1-291
Cow position: chr1:70422117-70422404 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 166

Conread position: 1-291
Cow position: chr1:72035113-72034824 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 163

Conread position: 1-291
Cow position: chr1:73546090-73545811 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 55, 72

Conread position: 1-291
Cow position: chr1:78809700-78809976 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 28

Conread position: 1-291
Cow position: chr1:80336430-80336149 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 116

Conread position: 1-291
Cow position: chr1:87072521-87072796 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 155, 30

Conread position: 1-291
Cow position: chr1:88618410-88618696 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 123

Conread position: 1-291
Cow position: chr1:89742195-89741895 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 16, 200

Conread position: 1-291
Cow position: chr1:94261364-94261636 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 52

Conread position: 1-291
Cow position: chr1:98030731-98031023 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 54

Conread position: 1-291
Cow position: chr1:99609182-99609468 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 190

Conread position: 1-291
Cow position: chr1:101867172-101867450 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 43

Conread position: 1-292
Cow position: chr1:48444366-48444093 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 150, 15

Conread position: 1-292
Cow position: chr1:68845669-68845388 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 110

Conread position: 1-293
Cow position: chr1:1981293-1981011 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 158, 36

Conread position: 1-293
Cow position: chr1:42138683-42138960 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 64

Conread position: 1-293
Cow position: chr1:61005749-61005461 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 76

Conread position: 1-293
Cow position: chr1:78857506-78857227 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 24

Conread position: 1-301
Cow position: chr1:43703231-43703519 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-325
Cow position: chr1:20384804-20384483 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 73

Conread position: 1-327
Cow position: chr1:75744677-75744999 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 74

Conread position: 1-343
Cow position: chr1:73761535-73761188 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 30

Conread position: 1-346
Cow position: chr1:34771687-34771351 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 22

Conread position: 1-347
Cow position: chr1:98310878-98311221 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 52, 198

Conread position: 1-352
Cow position: chr1:72286233-72285894 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 27

Conread position: 1-358
Cow position: chr1:43340806-43340416 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 353

Conread position: 1-358
Cow position: chr1:76222874-76222504 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 95

Conread position: 1-360
Cow position: chr1:68827089-68826705 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 51, 30

Conread position: 1-361
Cow position: chr1:53495280-53495644 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 146

Conread position: 1-430
Cow position: chr1:24235704-24235278 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 144

Conread position: 2-142
Cow position: chr1:86484773-86484923 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 2-146
Cow position: chr1:96712996-96712849 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 2-156
Cow position: chr1:49839325-49839477 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 72

Conread position: 2-161
Cow position: chr1:53540208-53540367 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 75

Conread position: 2-161
Cow position: chr1:85593588-85593753 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 2-163
Cow position: chr1:23634083-23633932 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 21

Conread position: 2-163
Cow position: chr1:32631284-32631440 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 25

Conread position: 2-164
Cow position: chr1:27495313-27495465 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 2-184
Cow position: chr1:55357468-55357282 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 29

Conread position: 2-184
Cow position: chr1:64421148-64421336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 105

Conread position: 2-193
Cow position: chr1:58419750-58419951 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 2-193
Cow position: chr1:71818644-71818448 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 77

Conread position: 2-203
Cow position: chr1:102825996-102825794 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 45

Conread position: 2-233
Cow position: chr1:60032781-60032556 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 157

Conread position: 2-235
Cow position: chr1:31235114-31234886 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 132

Conread position: 2-247
Cow position: chr1:70028396-70028637 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 77

Conread position: 2-252
Cow position: chr1:24445811-24445567 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 20

Conread position: 2-252
Cow position: chr1:48105616-48105370 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 73

Conread position: 2-258
Cow position: chr1:1991607-1991351 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 77

Conread position: 2-258
Cow position: chr1:53308575-53308324 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 31

Conread position: 2-263
Cow position: chr1:11772263-11772013 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 127

Conread position: 2-263
Cow position: chr1:45007284-45007538 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 27

Conread position: 2-264
Cow position: chr1:72141382-72141648 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 31

Conread position: 2-266
Cow position: chr1:20204844-20205102 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 140

Conread position: 2-266
Cow position: chr1:44506785-44507048 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 2-266
Cow position: chr1:53374253-53374508 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 154, 31

Conread position: 2-266
Cow position: chr1:53424993-53425252 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 142, 155

Conread position: 2-266
Cow position: chr1:78791488-78791229 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 24

Conread position: 2-267
Cow position: chr1:4401963-4402221 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 54

Conread position: 2-272
Cow position: chr1:63530398-63530639 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 26

Conread position: 2-272
Cow position: chr1:102349940-102349669 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 203

Conread position: 2-275
Cow position: chr1:80988164-80988431 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 98

Conread position: 2-277
Cow position: chr1:1053406-1053665 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 29

Conread position: 2-277
Cow position: chr1:12222787-12222521 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 26

Conread position: 2-277
Cow position: chr1:30441777-30442041 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 78

Conread position: 2-277
Cow position: chr1:36880096-36880372 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 143

Conread position: 2-277
Cow position: chr1:68951449-68951711 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 31

Conread position: 2-288
Cow position: chr1:24778161-24777897 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 151, 32

Conread position: 2-288
Cow position: chr1:65318399-65318672 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 79, 32

Conread position: 2-290
Cow position: chr1:9533993-9534261 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 29

Conread position: 2-290
Cow position: chr1:70434817-70435097 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 77

Conread position: 2-291
Cow position: chr1:52435088-52435372 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 114

Conread position: 2-291
Cow position: chr1:81228522-81228233 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 33

Conread position: 3-133
Cow position: chr1:64160159-64160289 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 30

Conread position: 3-141
Cow position: chr1:21092910-21093049 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 71

Conread position: 3-210
Cow position: chr1:8349492-8349284 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 34

Conread position: 3-215
Cow position: chr1:4293881-4294093 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 155, 28

Conread position: 3-218
Cow position: chr1:21342726-21342499 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 168

Conread position: 3-228
Cow position: chr1:1801958-1802188 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 26

Conread position: 3-257
Cow position: chr1:95100780-95101020 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 40, 97

Conread position: 3-266
Cow position: chr1:46030534-46030286 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 155, 30

Conread position: 3-266
Cow position: chr1:92369547-92369813 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 76

Conread position: 3-266
Cow position: chr1:92963217-92963470 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 87

Conread position: 3-267
Cow position: chr1:84282883-84283149 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 158

Conread position: 3-272
Cow position: chr1:93528509-93528782 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 196

Conread position: 3-275
Cow position: chr1:62036619-62036886 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 52

Conread position: 3-277
Cow position: chr1:102266448-102266182 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 25

Conread position: 3-286
Cow position: chr1:98360590-98360309 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 146

Conread position: 3-291
Cow position: chr1:74084374-74084091 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 30

Conread position: 3-291
Cow position: chr1:96964139-96964416 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 65

Conread position: 3-291
Cow position: chr1:97231782-97232060 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 21

Conread position: 3-343
Cow position: chr1:85774278-85774620 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 70

Conread position: 3-351
Cow position: chr1:62291867-62291531 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 285, 25

Conread position: 4-140
Cow position: chr1:61246334-61246203 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 4-155
Cow position: chr1:20287934-20288089 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 75

Conread position: 4-193
Cow position: chr1:67290685-67290875 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 100

Conread position: 4-263
Cow position: chr1:21508208-21508465 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 29

Conread position: 4-263
Cow position: chr1:65905188-65904926 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 45

Conread position: 4-264
Cow position: chr1:72011984-72011740 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 161, 24

Conread position: 4-266
Cow position: chr1:73196416-73196154 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 76

Conread position: 4-275
Cow position: chr1:69127347-69127082 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 97

Conread position: 4-275
Cow position: chr1:73584583-73584326 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 27

Conread position: 4-281
Cow position: chr1:31608079-31607799 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 21, 167

Conread position: 4-291
Cow position: chr1:874462-874754 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 193

Conread position: 5-158
Cow position: chr1:3244674-3244821 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 69

Conread position: 5-184
Cow position: chr1:21835769-21835940 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 18

Conread position: 5-187
Cow position: chr1:95327332-95327148 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 74

Conread position: 5-261
Cow position: chr1:102756605-102756363 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 5-266
Cow position: chr1:20667921-20667667 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 26

Conread position: 5-266
Cow position: chr1:81868905-81868654 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 31

Conread position: 5-275
Cow position: chr1:57880972-57880700 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 151

Conread position: 5-281
Cow position: chr1:50345363-50345635 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 74

Conread position: 5-288
Cow position: chr1:37309690-37309422 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 26

Conread position: 5-353
Cow position: chr1:26729548-26729887 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 6-161
Cow position: chr1:87216283-87216435 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 69

Conread position: 6-163
Cow position: chr1:44164900-44165061 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 6-178
Cow position: chr1:63905653-63905475 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 50, 72

Conread position: 6-184
Cow position: chr1:99095187-99095369 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 14

Conread position: 6-229
Cow position: chr1:69540120-69540328 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 72

Conread position: 6-230
Cow position: chr1:12871185-12870969 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 25

Conread position: 6-238
Cow position: chr1:8869838-8869611 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 69

Conread position: 6-258
Cow position: chr1:99807906-99807649 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 71

Conread position: 6-261
Cow position: chr1:69415896-69415639 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 73

Conread position: 6-262
Cow position: chr1:101551279-101551534 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 110

Conread position: 6-263
Cow position: chr1:6200391-6200647 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 147

Conread position: 6-263
Cow position: chr1:18196678-18196933 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 143

Conread position: 6-266
Cow position: chr1:29975776-29975525 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 161, 48

Conread position: 6-277
Cow position: chr1:7748034-7748299 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 153

Conread position: 6-277
Cow position: chr1:7752200-7752465 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 153

Conread position: 6-284
Cow position: chr1:6939820-6939543 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 87

Conread position: 6-288
Cow position: chr1:33207053-33206783 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 70

Conread position: 7-163
Cow position: chr1:101207652-101207801 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 7-182
Cow position: chr1:50634583-50634402 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 70

Conread position: 7-236
Cow position: chr1:77620370-77620592 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 71

Conread position: 7-260
Cow position: chr1:19145099-19144858 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 56

Conread position: 7-263
Cow position: chr1:95178773-95179026 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 162

Conread position: 7-266
Cow position: chr1:57297301-57297557 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 7-272
Cow position: chr1:83747762-83748023 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 75

Conread position: 7-272
Cow position: chr1:90868616-90868360 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 63

Conread position: 7-355
Cow position: chr1:49131299-49130935 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 53, 194

Conread position: 8-159
Cow position: chr1:101007796-101007644 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 33

Conread position: 8-164
Cow position: chr1:87888226-87888381 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 47

Conread position: 8-237
Cow position: chr1:80631522-80631759 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 37, 111

Conread position: 8-266
Cow position: chr1:69695179-69694918 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 168

Conread position: 8-275
Cow position: chr1:11832944-11832695 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 71

Conread position: 8-281
Cow position: chr1:34300724-34300461 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 8-291
Cow position: chr1:48580955-48581229 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 8-291
Cow position: chr1:51769907-51770192 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 160

Conread position: 9-253
Cow position: chr1:60907195-60907439 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 171

Conread position: 9-266
Cow position: chr1:81569210-81568953 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 70

Conread position: 9-277
Cow position: chr1:13548165-13547891 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 28

Conread position: 9-288
Cow position: chr1:42545959-42545682 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 49, 22

Conread position: 10-284
Cow position: chr1:71135978-71136245 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 65

Conread position: 10-286
Cow position: chr1:90621689-90621410 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 68

Conread position: 10-286
Cow position: chr1:91875085-91874822 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 33

Conread position: 10-288
Cow position: chr1:71119334-71119617 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 46, 98

Conread position: 11-291
Cow position: chr1:484639-484367 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 18

Conread position: 12-207
Cow position: chr1:49317669-49317465 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 19

Conread position: 12-286
Cow position: chr1:81290338-81290601 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 43

Conread position: 12-288
Cow position: chr1:77880903-77880637 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 19

Conread position: 12-291
Cow position: chr1:24876093-24876362 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 92

Conread position: 12-349
Cow position: chr1:20544119-20544475 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 66

Conread position: 13-182
Cow position: chr1:81638231-81638408 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 107

Conread position: 13-288
Cow position: chr1:60281195-60281470 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 66

Conread position: 13-291
Cow position: chr1:51417605-51417871 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 21

Conread position: 14-229
Cow position: chr1:59518750-59518961 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 61

Conread position: 15-160
Cow position: chr1:84116228-84116372 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 109

Conread position: 15-163
Cow position: chr1:101280885-101280741 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 66

Conread position: 15-276
Cow position: chr1:16061188-16060919 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 16

Conread position: 15-287
Cow position: chr1:89381101-89381371 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 61

Conread position: 15-288
Cow position: chr1:22525716-22525975 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 139, 16

Conread position: 15-288
Cow position: chr1:101632508-101632240 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 24, 60

Conread position: 16-260
Cow position: chr1:6795102-6794855 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 16-263
Cow position: chr1:19568680-19568922 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 60

Conread position: 16-266
Cow position: chr1:10519207-10518955 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 27

Conread position: 16-277
Cow position: chr1:31934342-31934593 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 170

Conread position: 16-291
Cow position: chr1:55429128-55428856 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 75

Conread position: 16-291
Cow position: chr1:70343869-70344140 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 137

Conread position: 18-184
Cow position: chr1:32596283-32596462 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 18-291
Cow position: chr1:67305411-67305141 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 67

Conread position: 20-266
Cow position: chr1:9470566-9470323 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 55

Conread position: 20-276
Cow position: chr1:101268172-101267919 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 81

Conread position: 20-288
Cow position: chr1:75141834-75142094 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 96

Conread position: 20-291
Cow position: chr1:53369914-53370183 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 96

Conread position: 20-291
Cow position: chr1:87095399-87095114 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 237

Conread position: 20-332
Cow position: chr1:53622794-53623096 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 108

Conread position: 21-277
Cow position: chr1:74927713-74927970 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 94

Conread position: 21-291
Cow position: chr1:57524984-57524717 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 130

Conread position: 22-244
Cow position: chr1:86110898-86110684 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 58

Conread position: 22-291
Cow position: chr1:95557870-95558137 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 84

Conread position: 23-158
Cow position: chr1:100745441-100745582 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 23-160
Cow position: chr1:4589638-4589499 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 18

Conread position: 23-182
Cow position: chr1:33811764-33811933 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 56

Conread position: 23-234
Cow position: chr1:62920004-62920212 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 8

Conread position: 23-275
Cow position: chr1:34856799-34856544 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 172

Conread position: 23-291
Cow position: chr1:4032464-4032732 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 170

Conread position: 24-234
Cow position: chr1:25386887-25387097 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 134

Conread position: 24-263
Cow position: chr1:38753753-38753995 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 158

Conread position: 24-275
Cow position: chr1:49077507-49077247 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 164

Conread position: 25-264
Cow position: chr1:93554680-93554909 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 89

Conread position: 26-159
Cow position: chr1:95922541-95922403 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 27-266
Cow position: chr1:70026505-70026270 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 52

Conread position: 28-236
Cow position: chr1:93228373-93228571 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 30-355
Cow position: chr1:4385204-4385542 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 45

Conread position: 32-232
Cow position: chr1:100770905-100770703 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 153

Conread position: 32-288
Cow position: chr1:23512811-23512563 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 90

Conread position: 32-288
Cow position: chr1:31272597-31272345 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 47

Conread position: 33-277
Cow position: chr1:42175575-42175813 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 169, 13

Conread position: 33-277
Cow position: chr1:85647931-85647694 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 33-288
Cow position: chr1:77683208-77683449 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 0

Conread position: 34-155
Cow position: chr1:73536587-73536709 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 34-158
Cow position: chr1:85826192-85826317 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 42

Conread position: 34-163
Cow position: chr1:52506707-52506576 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 34-193
Cow position: chr1:86511976-86512146 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 34-221
Cow position: chr1:51684649-51684838 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 17, 159

Conread position: 34-252
Cow position: chr1:76019845-76019630 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 66

Conread position: 34-260
Cow position: chr1:53369059-53369274 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 34-270
Cow position: chr1:20000899-20000669 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 12

Conread position: 34-275
Cow position: chr1:33409782-33409541 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 115

Conread position: 34-275
Cow position: chr1:100324889-100324665 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 34-277
Cow position: chr1:14309192-14308946 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 161

Conread position: 34-284
Cow position: chr1:88913169-88913412 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 34-287
Cow position: chr1:97938815-97939052 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 126

Conread position: 34-288
Cow position: chr1:3962846-3962590 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 16, 44

Conread position: 34-288
Cow position: chr1:42555111-42555363 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 151

Conread position: 34-347
Cow position: chr1:21131248-21130921 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 150

Conread position: 34-350
Cow position: chr1:96472296-96472625 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 40

Conread position: 35-266
Cow position: chr1:5579906-5580131 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 20

Conread position: 35-277
Cow position: chr1:86682716-86682474 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 44

Conread position: 35-286
Cow position: chr1:72068989-72068740 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 41

Conread position: 35-286
Cow position: chr1:89349814-89350060 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 39

Conread position: 35-291
Cow position: chr1:14759499-14759255 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 36-266
Cow position: chr1:22192611-22192844 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 164

Conread position: 37-159
Cow position: chr1:65909375-65909502 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 37-163
Cow position: chr1:29901118-29900996 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 37-182
Cow position: chr1:98397107-98396957 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 39

Conread position: 37-251
Cow position: chr1:7609469-7609680 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 37

Conread position: 37-268
Cow position: chr1:96365518-96365738 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 38

Conread position: 37-275
Cow position: chr1:96038941-96038716 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 108

Conread position: 37-277
Cow position: chr1:2737051-2737286 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 127

Conread position: 37-277
Cow position: chr1:31390740-31390503 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 38

Conread position: 37-288
Cow position: chr1:89485425-89485677 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 142

Conread position: 38-225
Cow position: chr1:57264141-57263957 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 36

Conread position: 38-264
Cow position: chr1:101946857-101946641 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 38

Conread position: 38-272
Cow position: chr1:89448750-89448981 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 38

Conread position: 38-291
Cow position: chr1:20950576-20950814 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 39-351
Cow position: chr1:30047740-30047417 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 45

Conread position: 40-263
Cow position: chr1:42482059-42482274 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 42-266
Cow position: chr1:85550219-85550003 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 116, 29

Conread position: 43-270
Cow position: chr1:43311915-43311693 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 114, 7

Conread position: 44-159
Cow position: chr1:90595694-90595578 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 45-155
Cow position: chr1:78184548-78184659 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 45-161
Cow position: chr1:12988907-12989022 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 53

Conread position: 45-183
Cow position: chr1:6961769-6961912 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 45-193
Cow position: chr1:64962807-64962654 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 74

Conread position: 45-263
Cow position: chr1:57420866-57420659 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 140

Conread position: 45-266
Cow position: chr1:24534392-24534182 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 45-272
Cow position: chr1:2976133-2975913 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 20

Conread position: 45-277
Cow position: chr1:91023606-91023381 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 115, 35

Conread position: 45-288
Cow position: chr1:41115853-41115622 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 45-288
Cow position: chr1:70312943-70312694 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 112, 29

Conread position: 45-288
Cow position: chr1:76436353-76436577 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 45-288
Cow position: chr1:97696602-97696841 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 151

Conread position: 45-291
Cow position: chr1:92997037-92996791 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 46-275
Cow position: chr1:29481764-29481547 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 107

Conread position: 46-286
Cow position: chr1:64572376-64572610 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 111, 28

Conread position: 46-291
Cow position: chr1:4243480-4243233 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 145

Conread position: 47-271
Cow position: chr1:62519221-62519443 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 121

Conread position: 50-277
Cow position: chr1:86073461-86073682 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 88

Conread position: 53-277
Cow position: chr1:79640420-79640202 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 53-291
Cow position: chr1:72105283-72105506 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 11

Conread position: 54-277
Cow position: chr1:26616200-26615988 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 36

Conread position: 55-272
Cow position: chr1:4701801-4701593 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 117

Conread position: 55-291
Cow position: chr1:100569023-100569256 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 94

Conread position: 56-193
Cow position: chr1:38544588-38544451 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 102, 18

Conread position: 56-258
Cow position: chr1:5023883-5023695 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 18

Conread position: 56-275
Cow position: chr1:5539404-5539192 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 55

Conread position: 56-277
Cow position: chr1:6228712-6228498 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 106

Conread position: 56-286
Cow position: chr1:64302375-64302148 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 101, 18

Conread position: 56-286
Cow position: chr1:78838671-78838890 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 15

Conread position: 57-266
Cow position: chr1:78697898-78697697 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 46

Conread position: 58-236
Cow position: chr1:35600423-35600244 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 132

Conread position: 58-255
Cow position: chr1:8984810-8984618 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 16

Conread position: 58-266
Cow position: chr1:43822274-43822474 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 123

Conread position: 59-258
Cow position: chr1:47790790-47790595 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 36

Conread position: 59-277
Cow position: chr1:89785786-89785995 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 16

Conread position: 59-286
Cow position: chr1:20104144-20104361 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 61-156
Cow position: chr1:59020154-59020249 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 61-193
Cow position: chr1:80422154-80422289 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 127

Conread position: 61-196
Cow position: chr1:79631879-79631738 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 61-277
Cow position: chr1:71666064-71665846 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 85

Conread position: 61-287
Cow position: chr1:3607688-3607900 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 62-265
Cow position: chr1:17196751-17196553 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 12

Conread position: 63-239
Cow position: chr1:22394674-22394853 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 92, 130

Conread position: 63-275
Cow position: chr1:47886609-47886396 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 131

Conread position: 63-291
Cow position: chr1:72813492-72813716 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 113

Conread position: 64-236
Cow position: chr1:15169451-15169287 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 64-286
Cow position: chr1:7023000-7023216 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 95, 59

Conread position: 66-288
Cow position: chr1:42541478-42541695 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 98

Conread position: 68-277
Cow position: chr1:627845-628052 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 89, 120

Conread position: 69-277
Cow position: chr1:98511813-98512013 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 70-284
Cow position: chr1:78794339-78794138 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 73-280
Cow position: chr1:92989478-92989679 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 74-228
Cow position: chr1:81416392-81416235 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 126

Conread position: 74-239
Cow position: chr1:56618761-56618601 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 74-265
Cow position: chr1:61543028-61542845 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 74-277
Cow position: chr1:22944136-22943942 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 74-277
Cow position: chr1:77522061-77522270 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 117

Conread position: 74-280
Cow position: chr1:87936789-87936987 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 74-288
Cow position: chr1:26427972-26427764 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 38

Conread position: 74-291
Cow position: chr1:89835138-89835351 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 112

Conread position: 74-293
Cow position: chr1:40482513-40482311 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 50

Conread position: 76-263
Cow position: chr1:648216-648397 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 76-275
Cow position: chr1:71399177-71399370 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 76-286
Cow position: chr1:81580066-81580272 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 36

Conread position: 76-290
Cow position: chr1:48769694-48769901 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 114

Conread position: 77-291
Cow position: chr1:4391390-4391171 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 113

Conread position: 77-291
Cow position: chr1:22823799-22824005 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 84, 6

Conread position: 78-288
Cow position: chr1:6972423-6972623 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 109

Conread position: 79-285
Cow position: chr1:92433895-92434094 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 84-288
Cow position: chr1:45223481-45223678 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 85-230
Cow position: chr1:55818962-55819098 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 87-290
Cow position: chr1:30189049-30189251 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 107

Conread position: 87-310
Cow position: chr1:82513453-82513234 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 203, 64

Conread position: 88-288
Cow position: chr1:45670542-45670729 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 92-291
Cow position: chr1:46030867-46031060 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 96-293
Cow position: chr1:100474143-100474336 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 97

Conread position: 99-291
Cow position: chr1:95153134-95153322 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 59

Conread position: 108-288
Cow position: chr1:98575969-98576144 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 69

Show alignments to all cow chromosomes.