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Cow genome map

           
Conread name:
           
rsin04_e10.y1
        

               
Conread position:
               
1-118
               

               
Cow position:
               
chr15:18284521-18284398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr15:241126-241001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr15:12837040-12837163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr15:19908792-19908666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr15:5044176-5044309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr15:9267784-9267914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr15:6168236-6168383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr15:9062315-9062458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr15:44437013-44436867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr15:34104545-34104402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr15:6586434-6586585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr15:50351096-50350953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr15:52739842-52739997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr15:36347048-36346883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr15:143952-144114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr15:7827761-7827917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr15:41583189-41583031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr15:47990483-47990646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr15:50341394-50341241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr15:52380570-52380412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:25110885-25111050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:51831314-51831478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr15:31949279-31949112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr15:49738768-49738928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr15:53183300-53183461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:24128928-24128765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:27282084-27281913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr15:38394699-38394531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr15:5071821-5071989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr15:29792633-29792811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr15:30985500-30985688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 175
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:23703052-23702871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:43827493-43827680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:44051218-44051411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:53402719-53402901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr15:53680489-53680670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr15:45585004-45584811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr15:4501258-4501068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr15:27281143-27280953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
162, 32
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr15:28126770-28126965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr15:38898704-38898503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr15:21523069-21522859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr15:51460506-51460296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 191
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr15:36422936-36422726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr15:21388886-21389106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr15:5498750-5498969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 177
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr15:22168337-22168120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:12723365-12723141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:44256756-44256540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:47105316-47105104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
155, 54
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr15:36671755-36671980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr15:37777631-37777409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr15:1301419-1301192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 155
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr15:40009371-40009598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr15:24285264-24285034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr15:9871131-9871366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr15:24305199-24305431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:37716642-37716884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 202
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr15:50957516-50957752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:16667220-16667456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:40798146-40798380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr15:41045684-41045453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:19119332-19119572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
153, 27
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:36773415-36773662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 176
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr15:39894867-39894620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr15:5632951-5632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr15:21908216-21907964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:15215299-15215044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr15:33303614-33303348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr15:5683413-5683170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:33306387-33306134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
162, 71
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:5571357-5571606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:6657386-6657121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 199
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:12785715-12785457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:20472266-20472525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:33285161-33284900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:38806216-38806479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:6462223-6462475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:22939054-22939303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:24044819-24045078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:25907192-25906929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:46868434-46868693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:16307695-16307443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:21803378-21803636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:225524-225784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:2144851-2145118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:4535186-4534931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:5234725-5234977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:5536029-5535779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:13554620-13554373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:14020751-14020505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:14576597-14576348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:17100435-17100689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:18018191-18017949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:20390999-20391255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:20482558-20482827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:20486938-20487183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:22136961-22136710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:22532520-22532272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:23696638-23696893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
243, 51
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:30047260-30047526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
56, 78
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:36782053-36782310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:38883435-38883169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 178
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:39619437-39619162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:41125288-41125552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:47042358-47042611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
240, 54
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:51632771-51633038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr15:15041156-15041402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr15:21365918-21366178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr15:11658286-11658555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 198
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:21894061-21893795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:21941566-21941829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:24797534-24797794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:36621697-36621413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 245
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:45479286-45479018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr15:11011330-11011590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
258, 33
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr15:9526189-9526464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 182
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr15:19186336-19186599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 192
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr15:45323063-45322794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr15:51898510-51898242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 175
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:9928637-9928371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:33625231-33624969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:2669183-2668916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:4861631-4861893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:8007261-8006992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:15881214-15880937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 147
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:16439546-16439820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:23115114-23114845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:25584810-25585079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:32979755-32980022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 170
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:43913805-43914084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:51427544-51427818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:51822427-51822164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:2968612-2968346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:6905820-6905542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:8665303-8665591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 203
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:9622472-9622192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 193
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:10245728-10245985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:12304920-12304647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:13515651-13515375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:18720593-18720323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:21421221-21420947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:23598029-23598308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 189
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:24616846-24616580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:25666944-25667213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 109
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:26903473-26903199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:36435489-36435214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:39373150-39373432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 180
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:44658639-44658369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr15:20390419-20390703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:7535389-7535650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:17663984-17664241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:37381910-37381632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:40957858-40957585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr15:1329820-1330101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr15:26421317-26421595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr15:41418538-41418826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 206
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:1722571-1722850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:3700003-3700287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:10336034-10335757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:10456731-10457012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:14871025-14870743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:16616473-16616193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:24968071-24967794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:25208486-25208757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:26404548-26404283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:26911800-26912072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:30982196-30981940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr15:2141016-2141304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr15:10088593-10088318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:794734-795023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:1298016-1297737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:20352113-20351830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:21821641-21821926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:26918995-26919277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:27972936-27973219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 172
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:35417342-35417627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:39599719-39599445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:42788871-42789150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:43626741-43626467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:47822080-47821814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr15:49922419-49922132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 175
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr15:6970265-6969984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr15:16583432-16583695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr15:23767986-23768260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr15:17084491-17084205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr15:39406014-39405740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr15:42143134-42142855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr15:50322874-50322590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:45137-45429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:608429-608141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:2952850-2953139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:7430260-7429965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
50, 192
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:13285313-13285016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:17196424-17196143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:17260877-17261169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 193
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:20370184-20370460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:20459021-20459313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
45, 195
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:20534171-20534455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:23798241-23798535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:26573666-26573374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:28924487-28924760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:29026599-29026885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:30001969-30001689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:31857871-31857586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:35642299-35642010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:42415537-42415249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:47842979-47843256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr15:53353273-53353553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr15:45245268-45245550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr15:4093645-4093941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 83
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr15:4918773-4919073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr15:23567846-23568142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr15:39436491-39436198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr15:38103611-38103962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr15:49230062-49230427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr15:11646209-11646575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr15:7191982-7192381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
2-113
               

               
Cow position:
               
chr15:31085812-31085702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr15:23332603-23332756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr15:34144877-34145061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
2-182
               

               
Cow position:
               
chr15:11362904-11363084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr15:20725336-20725527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr15:5730215-5729988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
210, 18
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr15:18206234-18206463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 162
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr15:38877025-38877268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr15:39598516-39598263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr15:16112683-16112420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr15:16640062-16639797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr15:35838810-35839076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr15:52482549-52482809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr15:53164300-53164040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr15:13387361-13387093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr15:22938499-22938746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr15:15573542-15573821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr15:21832146-21832425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 203
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr15:32323927-32324194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr15:50302461-50302184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr15:4138415-4138135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 159
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr15:4485423-4485152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 144
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr15:22531940-22531665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr15:29810387-29810121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr15:27900223-27900513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr15:6530565-6530852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr15:33976415-33976700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
3-130
               

               
Cow position:
               
chr15:26158340-26158467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr15:1128274-1128129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr15:33314166-33314329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr15:25306821-25306606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr15:10845999-10845789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr15:43030744-43030993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr15:34206920-34207167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr15:1083095-1083362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr15:41225284-41225549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr15:24128307-24128040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr15:36391949-36391669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
4-156
               

               
Cow position:
               
chr15:45217096-45216944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 46
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr15:22095397-22095215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr15:1804052-1804318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 186
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr15:36259325-36259584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr15:41619912-41620170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr15:33510970-33510814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr15:53045601-53045835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr15:21826765-21827002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
192, 51
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr15:37395397-37395646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr15:14505702-14505479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr15:30820559-30820790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr15:19403254-19403030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
7-272
               

               
Cow position:
               
chr15:11995749-11996013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 163
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr15:84974-85247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr15:23180703-23180531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr15:8610046-8610231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr15:23791729-23791552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr15:38838022-38837768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 135
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr15:6628017-6628268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr15:31137189-31137458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr15:51779348-51779063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
9-166
               

               
Cow position:
               
chr15:4676733-4676894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr15:17233465-17233202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr15:23275809-23275542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr15:5568051-5568205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr15:14856204-14856409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
10-258
               

               
Cow position:
               
chr15:44641168-44640924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr15:22871880-22871628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 182
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr15:43673672-43673935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr15:40999795-41000072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr15:21582649-21582929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr15:8578852-8579123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 198
               

               
Conread position:
               
12-291
               

               
Cow position:
               
chr15:16657760-16657468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr15:11560248-11560499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
14-288
               

               
Cow position:
               
chr15:17870026-17870286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr15:17858969-17859204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr15:38162274-38162008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
16-291
               

               
Cow position:
               
chr15:23572415-23572691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
16-352
               

               
Cow position:
               
chr15:27892271-27891944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
17-277
               

               
Cow position:
               
chr15:47279873-47280130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
19-217
               

               
Cow position:
               
chr15:43750775-43750577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
20-219
               

               
Cow position:
               
chr15:15707853-15708048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
20-223
               

               
Cow position:
               
chr15:12441561-12441763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr15:39621603-39621333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
27, 31
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr15:8428277-8428020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
23-162
               

               
Cow position:
               
chr15:38846362-38846221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
23-291
               

               
Cow position:
               
chr15:19771392-19771131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
24-184
               

               
Cow position:
               
chr15:46611184-46611022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
27-288
               

               
Cow position:
               
chr15:286730-286476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
31-288
               

               
Cow position:
               
chr15:37205291-37205046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 15
               

               
Conread position:
               
32-353
               

               
Cow position:
               
chr15:37931513-37931852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
34-184
               

               
Cow position:
               
chr15:23927220-23927384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
34-239
               

               
Cow position:
               
chr15:9648463-9648661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr15:10737499-10737724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr15:34140227-34140001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr15:50177355-50177129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
34-267
               

               
Cow position:
               
chr15:35945770-35945548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
34-272
               

               
Cow position:
               
chr15:4296014-4295777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr15:8354287-8354050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
34-284
               

               
Cow position:
               
chr15:11559107-11559353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
34-291
               

               
Cow position:
               
chr15:39316585-39316847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr15:48851246-48851402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
35-272
               

               
Cow position:
               
chr15:5726573-5726339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr15:16904871-16904720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
36-275
               

               
Cow position:
               
chr15:10608063-10608295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
37-219
               

               
Cow position:
               
chr15:16936597-16936782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
37-252
               

               
Cow position:
               
chr15:24941129-24941337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
37-272
               

               
Cow position:
               
chr15:915604-915829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
37-286
               

               
Cow position:
               
chr15:22553299-22553541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
38-184
               

               
Cow position:
               
chr15:13684026-13684178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
39-266
               

               
Cow position:
               
chr15:18671211-18671436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
39-288
               

               
Cow position:
               
chr15:9970736-9970980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
41-288
               

               
Cow position:
               
chr15:28823579-28823820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
45-184
               

               
Cow position:
               
chr15:5691616-5691478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
45-272
               

               
Cow position:
               
chr15:10512037-10512259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
45-280
               

               
Cow position:
               
chr15:35112644-35112877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
45-284
               

               
Cow position:
               
chr15:4418165-4418398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
45-291
               

               
Cow position:
               
chr15:20422545-20422783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 148
               

               
Conread position:
               
45-358
               

               
Cow position:
               
chr15:43599418-43599105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
229, 10
               

               
Conread position:
               
46-277
               

               
Cow position:
               
chr15:7307920-7308148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
47-275
               

               
Cow position:
               
chr15:11987176-11987396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 107
               

               
Conread position:
               
47-275
               

               
Cow position:
               
chr15:23865836-23866058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
47-288
               

               
Cow position:
               
chr15:12870632-12870866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
48-291
               

               
Cow position:
               
chr15:1857958-1857719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
49-352
               

               
Cow position:
               
chr15:9781697-9781385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
50-260
               

               
Cow position:
               
chr15:5567171-5566950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
51-305
               

               
Cow position:
               
chr15:24411641-24411400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr15:9107259-9107050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
56-275
               

               
Cow position:
               
chr15:22930117-22930339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr15:49274174-49273959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
57-266
               

               
Cow position:
               
chr15:4178715-4178924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr15:38036717-38036933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
57-293
               

               
Cow position:
               
chr15:12655693-12655924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
58-290
               

               
Cow position:
               
chr15:10231521-10231754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
61-184
               

               
Cow position:
               
chr15:36724962-36725088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
61-277
               

               
Cow position:
               
chr15:30470752-30470963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr15:662251-662470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr15:33178209-33178410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
66-270
               

               
Cow position:
               
chr15:39326299-39326501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
68-159
               

               
Cow position:
               
chr15:33553709-33553801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
68-281
               

               
Cow position:
               
chr15:5717921-5717715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
71-275
               

               
Cow position:
               
chr15:6232807-6233007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
73-162
               

               
Cow position:
               
chr15:29861531-29861442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-288
               

               
Cow position:
               
chr15:35204942-35205155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
83, 126
               

               
Conread position:
               
74-238
               

               
Cow position:
               
chr15:16448891-16448730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
74-288
               

               
Cow position:
               
chr15:16927892-16928096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
74-291
               

               
Cow position:
               
chr15:28258250-28258462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 101
               

               
Conread position:
               
74-342
               

               
Cow position:
               
chr15:5158580-5158320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
75-288
               

               
Cow position:
               
chr15:31928694-31928898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr15:12359240-12358971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
76-266
               

               
Cow position:
               
chr15:34284208-34284390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
77-277
               

               
Cow position:
               
chr15:4754499-4754713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 169
               

               
Conread position:
               
78-275
               

               
Cow position:
               
chr15:37865567-37865377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
79-293
               

               
Cow position:
               
chr15:21166216-21166432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 164
               

               
Conread position:
               
85-226
               

               
Cow position:
               
chr15:43788446-43788311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
85-267
               

               
Cow position:
               
chr15:5244635-5244810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
85-275
               

               
Cow position:
               
chr15:19807523-19807704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
85-285
               

               
Cow position:
               
chr15:10660357-10660554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr15:12843-12643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
88-287
               

               
Cow position:
               
chr15:35440884-35441079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
92-277
               

               
Cow position:
               
chr15:10400083-10400262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
120-265
               

               
Cow position:
               
chr15:32977685-32977825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.