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Cow genome map

           
Conread name:
           
rsin04_e10.y1
        

               
Conread position:
               
1-142
               

               
Cow position:
               
chr25:17712342-17712486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr25:20460931-20461078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr25:23324556-23324406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr25:21193136-21192978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr25:2046745-2046599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr25:23389474-23389319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:7800944-7801100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:36026815-36026970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:8347317-8347471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:12204278-12204432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:35110322-35110163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr25:10137906-10138054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr25:24669623-24669473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr25:12899562-12899722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr25:20085095-20085250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr25:6424780-6424619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr25:10365944-10365783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr25:40658107-40658268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:20060223-20060059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 142
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:33839196-33839350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr25:35344846-35345000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr25:32453590-32453425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:18075476-18075647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr25:24726979-24726805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr25:12824206-12824022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr25:26112082-26112261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:7329352-7329546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:12521153-12520967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:13642508-13642315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:13736503-13736316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:14224988-14224806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:16001712-16001528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:17354190-17354364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr25:3982852-3983045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:5514814-5515019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 197
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:12817180-12817380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:13569359-13569165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:35625368-35625179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr25:41384274-41384060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr25:30319641-30319424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
45, 203
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:5791999-5791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:35332976-35333192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:36033244-36033457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:20211278-20211059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:26270126-26269912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr25:31732928-31732693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr25:9396258-9396475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:6891711-6891504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:15319728-15319951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:25827270-25827503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
50, 199
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:1735508-1735285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:36535628-36535398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
167, 188
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:14791560-14791793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:35607914-35607685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr25:36779300-36779538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 190
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:12239340-12239107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:13672196-13672435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 188
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:22203882-22203649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:21047134-21047373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 55
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:8157702-8157456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:2194753-2194985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:12097650-12097895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:1838047-1838300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:40957180-40956925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:9023452-9023708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:21289148-21289407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:33691361-33691619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:5837158-5836895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:24405928-24405671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:13380808-13380537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 196
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:14117917-14118155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:17566395-17566651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:20348666-20348933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 196
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:20402912-20402645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 183
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:25754189-25753932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:31230418-31230178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:36392156-36391889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:14833848-14833595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:16714466-16714203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:8120584-8120847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:18988184-18988457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 186
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:21191295-21191556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:26238679-26238929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:33550313-33550578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:61465-61718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:6977786-6978047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:10643502-10643241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr25:13387620-13387876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
164, 22
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr25:20785776-20785517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr25:35347712-35347972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:26133846-26134114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:27801098-27801349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:27821219-27821484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr25:22531095-22531353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:17704557-17704817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:32191477-32191734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:38135556-38135823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:6464221-6463955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:12261089-12260813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:12755683-12755403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:14196664-14196939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:17342257-17342534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 194
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:18294505-18294238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:20020179-20019927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:21042195-21042481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:33959456-33959176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:37594222-37594483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:10407610-10407336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:11436994-11436729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:16319324-16319062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:18564303-18564564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:20076305-20076575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:25861552-25861272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:26338253-26338536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 196
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:41132547-41132282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:41107566-41107835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr25:40905021-40904748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr25:3145648-3145928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 193
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:15377141-15377411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:19679150-19679440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:23917648-23917926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:36761914-36762190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:13272377-13272655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:4547912-4547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:6961342-6961066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
149, 7
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:7216636-7216911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:7306106-7306379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:11662012-11661731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:15714689-15714960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:19129661-19129941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:20023585-20023299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:36036972-36036692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:10504527-10504254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr25:26654714-26654995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 190
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:5846999-5846720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:6226849-6227124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:11585326-11585607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:12778724-12778452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:21245799-21245515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 161
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:21895078-21894796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:26087323-26087610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:28188141-28187856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 169
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:40321485-40321199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr25:33664088-33663815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr25:23053364-23053648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 140
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:6470412-6470116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:6474291-6473995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
52, 85
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:10218242-10217957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:16064704-16064984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:16921986-16921705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:20133507-20133222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:21950934-21951222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:26090006-26089721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:26700846-26701119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr25:29826219-29826501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr25:34768912-34768638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr25:22297209-22296889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:2110891-2111240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 13
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:6003183-6002840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:13294714-13295067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr25:16400442-16400103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
2-129
               

               
Cow position:
               
chr25:448536-448408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr25:6256130-6255974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr25:8918466-8918280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 77
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr25:9961368-9961176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr25:20069529-20069718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr25:9754276-9754049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr25:38425174-38425429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr25:25051575-25051300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr25:8576502-8576779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr25:17658422-17658696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr25:11131390-11131671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr25:24452358-24452093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr25:36081683-36081962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr25:14512925-14513204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr25:20395012-20395153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr25:18905692-18905953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr25:7581616-7581366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr25:788080-788261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr25:4681046-4681308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
7-168
               

               
Cow position:
               
chr25:14467272-14467104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr25:8512281-8512049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr25:36017353-36017625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr25:7641640-7641327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
8-160
               

               
Cow position:
               
chr25:11542725-11542880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr25:23323017-23323197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr25:20789676-20789501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
8-193
               

               
Cow position:
               
chr25:18894908-18894712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
10-184
               

               
Cow position:
               
chr25:4002613-4002799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr25:5407560-5407836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr25:26457864-26457614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 177
               

               
Conread position:
               
13-288
               

               
Cow position:
               
chr25:38981930-38982182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
14-265
               

               
Cow position:
               
chr25:12081496-12081256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
16-183
               

               
Cow position:
               
chr25:6943295-6943114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr25:11318833-11319007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr25:6886156-6885895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
20-229
               

               
Cow position:
               
chr25:11315733-11315939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr25:17144254-17144495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
20-280
               

               
Cow position:
               
chr25:35612475-35612232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr25:15440957-15440691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
23-164
               

               
Cow position:
               
chr25:26058414-26058557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
24-193
               

               
Cow position:
               
chr25:31704820-31705008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 180
               

               
Conread position:
               
27-275
               

               
Cow position:
               
chr25:33978386-33978142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
33-237
               

               
Cow position:
               
chr25:8485653-8485452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
33-270
               

               
Cow position:
               
chr25:6996624-6996855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
34-193
               

               
Cow position:
               
chr25:6121930-6121764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 158
               

               
Conread position:
               
34-249
               

               
Cow position:
               
chr25:9957199-9956988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
34-266
               

               
Cow position:
               
chr25:9349433-9349216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr25:19317099-19317341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
34-277
               

               
Cow position:
               
chr25:448330-448087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 158
               

               
Conread position:
               
34-285
               

               
Cow position:
               
chr25:21893175-21893424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
34-286
               

               
Cow position:
               
chr25:26679065-26679313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
34-287
               

               
Cow position:
               
chr25:20007974-20008221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr25:14945610-14945455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
35-263
               

               
Cow position:
               
chr25:9002513-9002736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
35-286
               

               
Cow position:
               
chr25:13443566-13443323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 38
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr25:32588036-32587881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
37-184
               

               
Cow position:
               
chr25:9634746-9634896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
37-288
               

               
Cow position:
               
chr25:23779478-23779241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
39-288
               

               
Cow position:
               
chr25:31732492-31732232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
44-288
               

               
Cow position:
               
chr25:22751157-22750918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
45-219
               

               
Cow position:
               
chr25:22332615-22332786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr25:6687803-6688012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr25:30618919-30619130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
45-267
               

               
Cow position:
               
chr25:24651598-24651381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
112, 142
               

               
Conread position:
               
45-272
               

               
Cow position:
               
chr25:8961627-8961843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
45-272
               

               
Cow position:
               
chr25:21668099-21668322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
47-277
               

               
Cow position:
               
chr25:5474371-5474152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
49-272
               

               
Cow position:
               
chr25:22730690-22730901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
50-288
               

               
Cow position:
               
chr25:18266018-18266253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 21
               

               
Conread position:
               
53-277
               

               
Cow position:
               
chr25:36020266-36020488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
55-266
               

               
Cow position:
               
chr25:24051826-24052033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
55-291
               

               
Cow position:
               
chr25:33686816-33686593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
56-237
               

               
Cow position:
               
chr25:12997456-12997632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
56-263
               

               
Cow position:
               
chr25:20664433-20664218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
56-272
               

               
Cow position:
               
chr25:11066284-11066070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
56-275
               

               
Cow position:
               
chr25:5920802-5921020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
56-350
               

               
Cow position:
               
chr25:16570479-16570754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
57-275
               

               
Cow position:
               
chr25:15634611-15634393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
57-277
               

               
Cow position:
               
chr25:9843039-9843254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr25:22756474-22756701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
58-212
               

               
Cow position:
               
chr25:29337207-29337358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr25:20216699-20216911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr25:33457604-33457819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
68-219
               

               
Cow position:
               
chr25:13640258-13640416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr25:17119625-17119834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 65
               

               
Conread position:
               
74-237
               

               
Cow position:
               
chr25:24504616-24504461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
74-265
               

               
Cow position:
               
chr25:12840841-12840652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 87
               

               
Conread position:
               
76-277
               

               
Cow position:
               
chr25:7035438-7035634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
76-277
               

               
Cow position:
               
chr25:26225142-26224951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
79-288
               

               
Cow position:
               
chr25:30816772-30816978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
81-281
               

               
Cow position:
               
chr25:36555801-36555607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
81-288
               

               
Cow position:
               
chr25:1824207-1824008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
82-270
               

               
Cow position:
               
chr25:12252923-12252738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
83-291
               

               
Cow position:
               
chr25:17474621-17474421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
85-286
               

               
Cow position:
               
chr25:19364168-19363972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 87
               

               
Conread position:
               
95-291
               

               
Cow position:
               
chr25:34242195-34242012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
99-270
               

               
Cow position:
               
chr25:36120408-36120569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
106-287
               

               
Cow position:
               
chr25:26051814-26051990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 68
               
Show alignments to all cow chromosomes.