Non-Coding RNA Search

Cow genome map


           Conread name:
           rsin04_e10.y1
        

               Conread position:
               1-122
               

               Cow position:
               chr5:23140737-23140618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               1-133
               

               Cow position:
               chr5:45026082-45025950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 117
               

               Conread position:
               1-134
               

               Cow position:
               chr5:63917575-63917441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               1-135
               

               Cow position:
               chr5:50870377-50870516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr5:37366733-37366872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               1-137
               

               Cow position:
               chr5:75828900-75828766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 74
               

               Conread position:
               1-142
               

               Cow position:
               chr5:61875342-61875207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-146
               

               Cow position:
               chr5:63388630-63388775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-155
               

               Cow position:
               chr5:6986994-6987153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               1-155
               

               Cow position:
               chr5:42667553-42667400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               1-155
               

               Cow position:
               chr5:53146051-53145895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 85
               

               Conread position:
               1-155
               

               Cow position:
               chr5:62826918-62826764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               1-156
               

               Cow position:
               chr5:12866993-12866827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr5:14415608-14415764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 9
               

               Conread position:
               1-158
               

               Cow position:
               chr5:74019936-74019778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr5:8994730-8994573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-159
               

               Cow position:
               chr5:18090563-18090718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr5:39242354-39242204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr5:43816776-43816615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               1-162
               

               Cow position:
               chr5:35145188-35145346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr5:16668409-16668559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr5:21525000-21525168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 155
               

               Conread position:
               1-163
               

               Cow position:
               chr5:32963794-32963633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               1-163
               

               Cow position:
               chr5:40169351-40169189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 124
               

               Conread position:
               1-163
               

               Cow position:
               chr5:41010161-41009999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-163
               

               Cow position:
               chr5:55176722-55176888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-163
               

               Cow position:
               chr5:56135133-56134970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               1-163
               

               Cow position:
               chr5:60520002-60520160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               1-164
               

               Cow position:
               chr5:3492037-3492193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               1-164
               

               Cow position:
               chr5:55821202-55821373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr5:61600248-61600419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               1-166
               

               Cow position:
               chr5:65933096-65932927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr5:45705883-45706047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               1-168
               

               Cow position:
               chr5:24616287-24616113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               1-168
               

               Cow position:
               chr5:29504945-29505113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-175
               

               Cow position:
               chr5:34885320-34885150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               1-183
               

               Cow position:
               chr5:6575752-6575573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               1-183
               

               Cow position:
               chr5:52040484-52040299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               1-183
               

               Cow position:
               chr5:72903392-72903208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               1-184
               

               Cow position:
               chr5:4797475-4797298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               1-184
               

               Cow position:
               chr5:20344992-20345187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 42
               

               Conread position:
               1-184
               

               Cow position:
               chr5:34915977-34916156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               163, 45
               

               Conread position:
               1-184
               

               Cow position:
               chr5:41410584-41410396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               1-184
               

               Cow position:
               chr5:42747991-42748176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               1-184
               

               Cow position:
               chr5:46104100-46103923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               1-184
               

               Cow position:
               chr5:50950389-50950579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               1-184
               

               Cow position:
               chr5:51490919-51490739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr5:72150087-72150275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               1-187
               

               Cow position:
               chr5:59443416-59443228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-190
               

               Cow position:
               chr5:16184925-16185112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               1-191
               

               Cow position:
               chr5:14420509-14420315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               51, 109
               

               Conread position:
               1-192
               

               Cow position:
               chr5:30639017-30638829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               157, 17
               

               Conread position:
               1-193
               

               Cow position:
               chr5:21964127-21964322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               1-193
               

               Cow position:
               chr5:43395303-43395114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 46
               

               Conread position:
               1-193
               

               Cow position:
               chr5:54064615-54064809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-193
               

               Cow position:
               chr5:58005079-58005281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               50, 104
               

               Conread position:
               1-194
               

               Cow position:
               chr5:6130188-6130390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               1-202
               

               Cow position:
               chr5:45036857-45037056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               1-210
               

               Cow position:
               chr5:30816551-30816759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               1-210
               

               Cow position:
               chr5:65887179-65886956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-215
               

               Cow position:
               chr5:43474683-43474897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-219
               

               Cow position:
               chr5:60126209-60126422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               1-220
               

               Cow position:
               chr5:7140269-7140056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               1-220
               

               Cow position:
               chr5:50215724-50215502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 177
               

               Conread position:
               1-221
               

               Cow position:
               chr5:37941957-37941738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               1-222
               

               Cow position:
               chr5:8024357-8024141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               155, 45
               

               Conread position:
               1-222
               

               Cow position:
               chr5:27015516-27015732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-223
               

               Cow position:
               chr5:63647639-63647413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               1-224
               

               Cow position:
               chr5:12709721-12709943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-224
               

               Cow position:
               chr5:49362156-49361938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 102
               

               Conread position:
               1-226
               

               Cow position:
               chr5:3627321-3627096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               52, 169
               

               Conread position:
               1-226
               

               Cow position:
               chr5:27403408-27403173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr5:35235873-35235652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               1-228
               

               Cow position:
               chr5:1766508-1766284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-228
               

               Cow position:
               chr5:55145527-55145304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               1-229
               

               Cow position:
               chr5:3639646-3639428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               1-229
               

               Cow position:
               chr5:56433634-56433860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               1-229
               

               Cow position:
               chr5:58144768-58144544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               1-229
               

               Cow position:
               chr5:59873570-59873347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               1-229
               

               Cow position:
               chr5:63840310-63840084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               54, 187
               

               Conread position:
               1-230
               

               Cow position:
               chr5:16025625-16025401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               1-232
               

               Cow position:
               chr5:28927757-28927523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               1-235
               

               Cow position:
               chr5:32975716-32975488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               72, 173
               

               Conread position:
               1-236
               

               Cow position:
               chr5:28957781-28957548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               1-236
               

               Cow position:
               chr5:54713901-54713663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 37
               

               Conread position:
               1-237
               

               Cow position:
               chr5:2500353-2500112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 182
               

               Conread position:
               1-237
               

               Cow position:
               chr5:28456575-28456338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 92
               

               Conread position:
               1-237
               

               Cow position:
               chr5:28459877-28459639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               1-237
               

               Cow position:
               chr5:56443117-56443342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               55, 123
               

               Conread position:
               1-237
               

               Cow position:
               chr5:64823477-64823244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-238
               

               Cow position:
               chr5:41951249-41951028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-239
               

               Cow position:
               chr5:13691739-13691498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               1-243
               

               Cow position:
               chr5:32956260-32956019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-257
               

               Cow position:
               chr5:35209641-35209389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 96
               

               Conread position:
               1-258
               

               Cow position:
               chr5:16938172-16937935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               1-258
               

               Cow position:
               chr5:56467540-56467778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               1-259
               

               Cow position:
               chr5:75437061-75436798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               51, 183
               

               Conread position:
               1-262
               

               Cow position:
               chr5:360111-359848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 175
               

               Conread position:
               1-262
               

               Cow position:
               chr5:52667863-52668129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               1-262
               

               Cow position:
               chr5:56524007-56524265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               46, 76
               

               Conread position:
               1-263
               

               Cow position:
               chr5:8162988-8162726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 191
               

               Conread position:
               1-263
               

               Cow position:
               chr5:9090188-9089931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-263
               

               Cow position:
               chr5:17063258-17062989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               1-263
               

               Cow position:
               chr5:22737940-22738197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 188
               

               Conread position:
               1-263
               

               Cow position:
               chr5:33080953-33080700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               1-263
               

               Cow position:
               chr5:33661690-33661938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               1-263
               

               Cow position:
               chr5:34049945-34050210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               1-263
               

               Cow position:
               chr5:34528397-34528639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               1-263
               

               Cow position:
               chr5:37646715-37646451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               1-263
               

               Cow position:
               chr5:47547882-47547631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 161
               

               Conread position:
               1-263
               

               Cow position:
               chr5:48828990-48829246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               1-263
               

               Cow position:
               chr5:55967047-55966788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-263
               

               Cow position:
               chr5:57591526-57591780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 97
               

               Conread position:
               1-263
               

               Cow position:
               chr5:65601296-65601549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               46, 125
               

               Conread position:
               1-263
               

               Cow position:
               chr5:66815740-66815480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               1-264
               

               Cow position:
               chr5:9390371-9390646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               1-264
               

               Cow position:
               chr5:34638721-34638976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               1-264
               

               Cow position:
               chr5:36855048-36855299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               212, 27
               

               Conread position:
               1-264
               

               Cow position:
               chr5:55955741-55956001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               1-265
               

               Cow position:
               chr5:18898819-18899069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr5:29212784-29213032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               155, 23
               

               Conread position:
               1-265
               

               Cow position:
               chr5:44752475-44752213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-266
               

               Cow position:
               chr5:741109-740845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               1-266
               

               Cow position:
               chr5:1950226-1949959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               1-266
               

               Cow position:
               chr5:5111241-5110979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr5:7552583-7552321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-266
               

               Cow position:
               chr5:11229838-11229579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr5:14629980-14629715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               1-266
               

               Cow position:
               chr5:16508926-16509201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               45, 195
               

               Conread position:
               1-266
               

               Cow position:
               chr5:17027930-17028190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr5:26467455-26467723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-266
               

               Cow position:
               chr5:28926352-28926087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               1-266
               

               Cow position:
               chr5:29903687-29903428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               1-266
               

               Cow position:
               chr5:30302731-30302986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               159, 43
               

               Conread position:
               1-266
               

               Cow position:
               chr5:35684770-35685030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr5:35969378-35969627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               1-266
               

               Cow position:
               chr5:37425578-37425837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               1-266
               

               Cow position:
               chr5:40039935-40039671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               1-266
               

               Cow position:
               chr5:42845765-42845498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr5:45845860-45845596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               1-266
               

               Cow position:
               chr5:46322976-46322708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 174
               

               Conread position:
               1-266
               

               Cow position:
               chr5:48010011-48009764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               1-266
               

               Cow position:
               chr5:49685445-49685176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 176
               

               Conread position:
               1-266
               

               Cow position:
               chr5:52000054-52000313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               1-266
               

               Cow position:
               chr5:56028695-56028446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr5:56518374-56518127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               1-266
               

               Cow position:
               chr5:62142506-62142771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 106
               

               Conread position:
               1-266
               

               Cow position:
               chr5:65752692-65752955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 177
               

               Conread position:
               1-267
               

               Cow position:
               chr5:4220816-4221074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-267
               

               Cow position:
               chr5:24348947-24349203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr5:39333706-39333435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               1-267
               

               Cow position:
               chr5:59115216-59115478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               50, 195
               

               Conread position:
               1-268
               

               Cow position:
               chr5:15598398-15598139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               1-269
               

               Cow position:
               chr5:11540208-11539952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               160, 32
               

               Conread position:
               1-270
               

               Cow position:
               chr5:458317-458587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               1-270
               

               Cow position:
               chr5:4617209-4617465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               213, 41
               

               Conread position:
               1-270
               

               Cow position:
               chr5:14550750-14550485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 165
               

               Conread position:
               1-270
               

               Cow position:
               chr5:23168983-23168727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               163, 24
               

               Conread position:
               1-270
               

               Cow position:
               chr5:47704298-47704027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               1-270
               

               Cow position:
               chr5:53835550-53835815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-270
               

               Cow position:
               chr5:58855939-58856201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-270
               

               Cow position:
               chr5:71494653-71494920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               1-271
               

               Cow position:
               chr5:34887362-34887095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               1-271
               

               Cow position:
               chr5:45409162-45409423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               1-272
               

               Cow position:
               chr5:5257461-5257187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               1-272
               

               Cow position:
               chr5:28330496-28330242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               1-272
               

               Cow position:
               chr5:57074499-57074230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               1-272
               

               Cow position:
               chr5:62172254-62172513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr5:64139398-64139661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-273
               

               Cow position:
               chr5:34463750-34463476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 196
               

               Conread position:
               1-275
               

               Cow position:
               chr5:6286591-6286329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 35
               

               Conread position:
               1-275
               

               Cow position:
               chr5:18574006-18574276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               1-275
               

               Cow position:
               chr5:29827889-29828151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 32
               

               Conread position:
               1-275
               

               Cow position:
               chr5:32153480-32153215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               1-275
               

               Cow position:
               chr5:33414573-33414307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 27
               

               Conread position:
               1-275
               

               Cow position:
               chr5:39094389-39094654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               1-275
               

               Cow position:
               chr5:54350525-54350257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               1-275
               

               Cow position:
               chr5:55756604-55756311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 210
               

               Conread position:
               1-275
               

               Cow position:
               chr5:59082360-59082090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 109
               

               Conread position:
               1-275
               

               Cow position:
               chr5:61576375-61576649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               1-275
               

               Cow position:
               chr5:64137087-64137360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               45, 190
               

               Conread position:
               1-276
               

               Cow position:
               chr5:26370533-26370790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               1-277
               

               Cow position:
               chr5:3771682-3771952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               1-277
               

               Cow position:
               chr5:6045123-6045402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               1-277
               

               Cow position:
               chr5:6839243-6838973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 120
               

               Conread position:
               1-277
               

               Cow position:
               chr5:12873579-12873857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               1-277
               

               Cow position:
               chr5:21617291-21617564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               1-277
               

               Cow position:
               chr5:26097131-26097395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               1-277
               

               Cow position:
               chr5:31469749-31469485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               46, 154
               

               Conread position:
               1-277
               

               Cow position:
               chr5:31923217-31923478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-277
               

               Cow position:
               chr5:34561844-34562123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-277
               

               Cow position:
               chr5:47317134-47316868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               152, 81
               

               Conread position:
               1-277
               

               Cow position:
               chr5:47871215-47870936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               50, 196
               

               Conread position:
               1-277
               

               Cow position:
               chr5:50483026-50482754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               1-277
               

               Cow position:
               chr5:50722882-50723152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               1-277
               

               Cow position:
               chr5:56070688-56070965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               52, 87
               

               Conread position:
               1-277
               

               Cow position:
               chr5:56317130-56317395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-277
               

               Cow position:
               chr5:57327628-57327907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 190
               

               Conread position:
               1-277
               

               Cow position:
               chr5:57575601-57575879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-281
               

               Cow position:
               chr5:50637665-50637931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               1-284
               

               Cow position:
               chr5:11668343-11668072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               127, 32
               

               Conread position:
               1-284
               

               Cow position:
               chr5:27411560-27411288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-284
               

               Cow position:
               chr5:30253577-30253854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-284
               

               Cow position:
               chr5:35208097-35208374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 77
               

               Conread position:
               1-285
               

               Cow position:
               chr5:39447695-39447421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-285
               

               Cow position:
               chr5:50943318-50943043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-286
               

               Cow position:
               chr5:15426361-15426653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               1-286
               

               Cow position:
               chr5:16893940-16893656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               1-286
               

               Cow position:
               chr5:19813378-19813105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               1-286
               

               Cow position:
               chr5:21828700-21828982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               1-286
               

               Cow position:
               chr5:24996390-24996108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               1-286
               

               Cow position:
               chr5:27102952-27102680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               156, 32
               

               Conread position:
               1-286
               

               Cow position:
               chr5:30950084-30949800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-286
               

               Cow position:
               chr5:34624804-34625075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               167, 54
               

               Conread position:
               1-286
               

               Cow position:
               chr5:46510031-46509750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-286
               

               Cow position:
               chr5:47601652-47601927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               1-286
               

               Cow position:
               chr5:50599889-50600163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               1-286
               

               Cow position:
               chr5:57935278-57934993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               1-286
               

               Cow position:
               chr5:64176285-64176011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               1-286
               

               Cow position:
               chr5:65776550-65776270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               1-286
               

               Cow position:
               chr5:69731353-69731615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               154, 23
               

               Conread position:
               1-287
               

               Cow position:
               chr5:22643382-22643116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               1-287
               

               Cow position:
               chr5:37645909-37646196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               1-287
               

               Cow position:
               chr5:44054202-44053939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               1-287
               

               Cow position:
               chr5:51935018-51935305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               55, 179
               

               Conread position:
               1-287
               

               Cow position:
               chr5:55928778-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               1-287
               

               Cow position:
               chr5:72564597-72564880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 149
               

               Conread position:
               1-288
               

               Cow position:
               chr5:2309728-2309439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               1-288
               

               Cow position:
               chr5:4280299-4280565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               157, 42
               

               Conread position:
               1-288
               

               Cow position:
               chr5:7723506-7723782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               1-288
               

               Cow position:
               chr5:15478949-15479242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               1-288
               

               Cow position:
               chr5:27419885-27419612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-288
               

               Cow position:
               chr5:29771350-29771645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-288
               

               Cow position:
               chr5:29980150-29979841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               1-288
               

               Cow position:
               chr5:34441956-34441663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               1-288
               

               Cow position:
               chr5:37808829-37808546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               1-288
               

               Cow position:
               chr5:39442129-39442413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               1-288
               

               Cow position:
               chr5:47323286-47323579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               52, 203
               

               Conread position:
               1-288
               

               Cow position:
               chr5:52645240-52644963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-288
               

               Cow position:
               chr5:54311168-54311453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               45, 194
               

               Conread position:
               1-288
               

               Cow position:
               chr5:57736950-57737216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               150, 32
               

               Conread position:
               1-288
               

               Cow position:
               chr5:59325993-59325725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               1-288
               

               Cow position:
               chr5:63987611-63987329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               1-288
               

               Cow position:
               chr5:65941418-65941133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-288
               

               Cow position:
               chr5:66257477-66257753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               152, 42
               

               Conread position:
               1-288
               

               Cow position:
               chr5:72007017-72006748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-289
               

               Cow position:
               chr5:63964337-63964047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               1-289
               

               Cow position:
               chr5:69337663-69337938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               1-290
               

               Cow position:
               chr5:7044875-7044586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-290
               

               Cow position:
               chr5:14314357-14314647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               1-290
               

               Cow position:
               chr5:31640263-31640544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               138, 54
               

               Conread position:
               1-290
               

               Cow position:
               chr5:43992156-43992443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               1-291
               

               Cow position:
               chr5:59093-58813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 103
               

               Conread position:
               1-291
               

               Cow position:
               chr5:6504044-6503761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               1-291
               

               Cow position:
               chr5:11427406-11427115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               56, 178
               

               Conread position:
               1-291
               

               Cow position:
               chr5:14904238-14903948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-291
               

               Cow position:
               chr5:17644820-17644508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               44, 262
               

               Conread position:
               1-291
               

               Cow position:
               chr5:17999659-17999376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               1-291
               

               Cow position:
               chr5:23529441-23529162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               1-291
               

               Cow position:
               chr5:26094334-26094046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               1-291
               

               Cow position:
               chr5:26377831-26377547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-291
               

               Cow position:
               chr5:36868581-36868855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-291
               

               Cow position:
               chr5:37190263-37189977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 152
               

               Conread position:
               1-291
               

               Cow position:
               chr5:45225989-45225697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 249
               

               Conread position:
               1-291
               

               Cow position:
               chr5:51151527-51151237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 138
               

               Conread position:
               1-291
               

               Cow position:
               chr5:51309803-51310092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               55, 151
               

               Conread position:
               1-291
               

               Cow position:
               chr5:52165347-52165059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 178
               

               Conread position:
               1-291
               

               Cow position:
               chr5:60210304-60210023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               1-292
               

               Cow position:
               chr5:58793779-58793485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               1-293
               

               Cow position:
               chr5:30276529-30276812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-293
               

               Cow position:
               chr5:65967896-65967609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               1-294
               

               Cow position:
               chr5:32696977-32696700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-348
               

               Cow position:
               chr5:3668733-3669087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               2-156
               

               Cow position:
               chr5:57271428-57271274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               2-157
               

               Cow position:
               chr5:6086725-6086567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               2-159
               

               Cow position:
               chr5:19778747-19778585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               2-161
               

               Cow position:
               chr5:24485589-24485441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               2-179
               

               Cow position:
               chr5:64060457-64060274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               2-184
               

               Cow position:
               chr5:47888878-47888686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               2-193
               

               Cow position:
               chr5:42777601-42777800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               2-194
               

               Cow position:
               chr5:64392991-64393192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 85
               

               Conread position:
               2-221
               

               Cow position:
               chr5:44994201-44993989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               2-223
               

               Cow position:
               chr5:1027855-1027641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               2-223
               

               Cow position:
               chr5:41486901-41486679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 32
               

               Conread position:
               2-229
               

               Cow position:
               chr5:3281668-3281894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 97
               

               Conread position:
               2-229
               

               Cow position:
               chr5:41452830-41452606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               2-237
               

               Cow position:
               chr5:26595268-26595036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               2-238
               

               Cow position:
               chr5:32140871-32140640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               2-238
               

               Cow position:
               chr5:56820425-56820193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               2-238
               

               Cow position:
               chr5:62985353-62985592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 117
               

               Conread position:
               2-249
               

               Cow position:
               chr5:65593716-65593951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               2-254
               

               Cow position:
               chr5:40357034-40356763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               53, 258
               

               Conread position:
               2-261
               

               Cow position:
               chr5:30844947-30845200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               2-264
               

               Cow position:
               chr5:54405059-54404792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               51, 196
               

               Conread position:
               2-266
               

               Cow position:
               chr5:69520727-69520986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               2-270
               

               Cow position:
               chr5:20127890-20128151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 116
               

               Conread position:
               2-273
               

               Cow position:
               chr5:61840023-61840290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               2-284
               

               Cow position:
               chr5:28224289-28224565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               44, 167
               

               Conread position:
               2-286
               

               Cow position:
               chr5:26262839-26262565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               2-286
               

               Cow position:
               chr5:46512930-46512654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               2-287
               

               Cow position:
               chr5:28946222-28945944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               2-291
               

               Cow position:
               chr5:6528517-6528805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               41, 102
               

               Conread position:
               2-291
               

               Cow position:
               chr5:43738115-43737843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-315
               

               Cow position:
               chr5:54060110-54060420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               44, 140
               

               Conread position:
               2-316
               

               Cow position:
               chr5:16214524-16214832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               3-136
               

               Cow position:
               chr5:3281034-3280900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               3-184
               

               Cow position:
               chr5:75244452-75244262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               3-236
               

               Cow position:
               chr5:21920205-21920446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               48, 163
               

               Conread position:
               3-265
               

               Cow position:
               chr5:55068543-55068800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               3-266
               

               Cow position:
               chr5:9894289-9894028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               3-267
               

               Cow position:
               chr5:34977002-34976746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               3-277
               

               Cow position:
               chr5:40152313-40152591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 203
               

               Conread position:
               3-277
               

               Cow position:
               chr5:57768135-57767879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               3-286
               

               Cow position:
               chr5:37814461-37814741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               3-286
               

               Cow position:
               chr5:50533545-50533273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               156, 24
               

               Conread position:
               4-156
               

               Cow position:
               chr5:39936941-39937097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               4-187
               

               Cow position:
               chr5:44849889-44849703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 133
               

               Conread position:
               4-229
               

               Cow position:
               chr5:43923311-43923093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               4-266
               

               Cow position:
               chr5:41546052-41545798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               4-277
               

               Cow position:
               chr5:38832958-38833227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               5-149
               

               Cow position:
               chr5:9859879-9859730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 74
               

               Conread position:
               5-184
               

               Cow position:
               chr5:71579013-71579201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               5-238
               

               Cow position:
               chr5:42744632-42744854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               151, 28
               

               Conread position:
               5-277
               

               Cow position:
               chr5:66581803-66582070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               41, 146
               

               Conread position:
               5-286
               

               Cow position:
               chr5:45397418-45397684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               6-183
               

               Cow position:
               chr5:49820980-49821164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               6-263
               

               Cow position:
               chr5:5879483-5879228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               6-286
               

               Cow position:
               chr5:41164934-41165203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               6-288
               

               Cow position:
               chr5:60715514-60715251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               7-161
               

               Cow position:
               chr5:34288629-34288475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               7-182
               

               Cow position:
               chr5:6683509-6683340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               7-266
               

               Cow position:
               chr5:54089880-54090130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               7-275
               

               Cow position:
               chr5:26990239-26990494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               7-288
               

               Cow position:
               chr5:21040124-21039866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               7-288
               

               Cow position:
               chr5:43858590-43858303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               7-288
               

               Cow position:
               chr5:64758925-64758650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               7-291
               

               Cow position:
               chr5:66972264-66972549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               6, 151
               

               Conread position:
               7-351
               

               Cow position:
               chr5:46122512-46122181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               8-162
               

               Cow position:
               chr5:44673526-44673685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-210
               

               Cow position:
               chr5:41531245-41531031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               8-277
               

               Cow position:
               chr5:50821621-50821889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               45, 71
               

               Conread position:
               8-333
               

               Cow position:
               chr5:12351947-12351599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               9-182
               

               Cow position:
               chr5:4952600-4952775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               9-286
               

               Cow position:
               chr5:42050391-42050667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               9-347
               

               Cow position:
               chr5:23866317-23865998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               10-233
               

               Cow position:
               chr5:40388026-40387810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               10-266
               

               Cow position:
               chr5:67932620-67932377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               10-288
               

               Cow position:
               chr5:4032150-4031869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               41, 185
               

               Conread position:
               10-288
               

               Cow position:
               chr5:47696598-47696333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 66
               

               Conread position:
               11-156
               

               Cow position:
               chr5:28324194-28324346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               11-210
               

               Cow position:
               chr5:30487084-30487296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               11-247
               

               Cow position:
               chr5:27154865-27155093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               12-161
               

               Cow position:
               chr5:31020286-31020141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               13-210
               

               Cow position:
               chr5:9083183-9083388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               14-290
               

               Cow position:
               chr5:56680099-56680375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               15-288
               

               Cow position:
               chr5:39874972-39875241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               15-289
               

               Cow position:
               chr5:35459445-35459175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               16-265
               

               Cow position:
               chr5:29844134-29844374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               16-277
               

               Cow position:
               chr5:12761270-12761012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 179
               

               Conread position:
               17-287
               

               Cow position:
               chr5:16206308-16206039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 63
               

               Conread position:
               18-225
               

               Cow position:
               chr5:51801117-51800917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               19-155
               

               Cow position:
               chr5:19078968-19079107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               20-288
               

               Cow position:
               chr5:42064052-42064322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               31, 161
               

               Conread position:
               21-210
               

               Cow position:
               chr5:3204685-3204884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 174
               

               Conread position:
               21-291
               

               Cow position:
               chr5:53855550-53855826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               25, 175
               

               Conread position:
               23-254
               

               Cow position:
               chr5:31144933-31144704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               23-287
               

               Cow position:
               chr5:65883922-65883656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               26, 126
               

               Conread position:
               24-223
               

               Cow position:
               chr5:38683210-38683412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 155
               

               Conread position:
               24-233
               

               Cow position:
               chr5:48405319-48405113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               27-288
               

               Cow position:
               chr5:26477150-26476901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               34-155
               

               Cow position:
               chr5:19294621-19294499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               34-208
               

               Cow position:
               chr5:7921529-7921356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               124, 12
               

               Conread position:
               34-216
               

               Cow position:
               chr5:41227113-41226927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               119, 12
               

               Conread position:
               34-231
               

               Cow position:
               chr5:34115518-34115717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 16
               

               Conread position:
               34-261
               

               Cow position:
               chr5:53842149-53842384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               34-266
               

               Cow position:
               chr5:45574486-45574715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               127, 16
               

               Conread position:
               34-272
               

               Cow position:
               chr5:73168133-73167910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               34-290
               

               Cow position:
               chr5:14473548-14473285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 165
               

               Conread position:
               34-291
               

               Cow position:
               chr5:7057536-7057282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               34-293
               

               Cow position:
               chr5:44848158-44847899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               35-157
               

               Cow position:
               chr5:72845912-72845787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               35-193
               

               Cow position:
               chr5:69047496-69047329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               35-229
               

               Cow position:
               chr5:34300782-34300978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               35-238
               

               Cow position:
               chr5:44583259-44583044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               35-253
               

               Cow position:
               chr5:991332-991546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               35-266
               

               Cow position:
               chr5:32673196-32672970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               36-238
               

               Cow position:
               chr5:25447431-25447632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               37-266
               

               Cow position:
               chr5:31918522-31918737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               37-266
               

               Cow position:
               chr5:57561390-57561618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 154
               

               Conread position:
               37-270
               

               Cow position:
               chr5:45273633-45273402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               37-270
               

               Cow position:
               chr5:73080075-73080304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               37-284
               

               Cow position:
               chr5:54768042-54767796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 161
               

               Conread position:
               38-265
               

               Cow position:
               chr5:33552539-33552329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               38-270
               

               Cow position:
               chr5:6891143-6890921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               38-291
               

               Cow position:
               chr5:63427137-63426885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 143
               

               Conread position:
               38-345
               

               Cow position:
               chr5:35763147-35763469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               39-270
               

               Cow position:
               chr5:44796857-44796634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               39-288
               

               Cow position:
               chr5:39258395-39258622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               41-277
               

               Cow position:
               chr5:58490589-58490835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               41-286
               

               Cow position:
               chr5:49474670-49474430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               44-266
               

               Cow position:
               chr5:60747398-60747185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               45-266
               

               Cow position:
               chr5:16179644-16179416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               104, 60
               

               Conread position:
               45-275
               

               Cow position:
               chr5:19335906-19335677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 146
               

               Conread position:
               45-285
               

               Cow position:
               chr5:49440991-49440757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               45-286
               

               Cow position:
               chr5:35826484-35826717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               45-291
               

               Cow position:
               chr5:18289010-18289242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               47-281
               

               Cow position:
               chr5:33560851-33560624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               47-291
               

               Cow position:
               chr5:53710811-53710569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               50-288
               

               Cow position:
               chr5:12901801-12902034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               56-266
               

               Cow position:
               chr5:13717679-13717474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 112
               

               Conread position:
               56-275
               

               Cow position:
               chr5:19523789-19524004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               56-287
               

               Cow position:
               chr5:58446695-58446923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               56-288
               

               Cow position:
               chr5:23678812-23678586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 139
               

               Conread position:
               56-288
               

               Cow position:
               chr5:32339072-32338848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               57-219
               

               Cow position:
               chr5:60448108-60448265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               57-267
               

               Cow position:
               chr5:56635793-56635991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               57-275
               

               Cow position:
               chr5:43371305-43371091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               57-291
               

               Cow position:
               chr5:64140423-64140658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               58-288
               

               Cow position:
               chr5:57419897-57419677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               58-290
               

               Cow position:
               chr5:41293974-41294199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               60-277
               

               Cow position:
               chr5:61912418-61912200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 131
               

               Conread position:
               60-286
               

               Cow position:
               chr5:36039108-36038886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               61-266
               

               Cow position:
               chr5:22188558-22188766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 132
               

               Conread position:
               61-286
               

               Cow position:
               chr5:12557395-12557172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               61-286
               

               Cow position:
               chr5:54375610-54375387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               62-277
               

               Cow position:
               chr5:3002814-3003014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               62-280
               

               Cow position:
               chr5:67462865-67463092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               63-279
               

               Cow position:
               chr5:53946794-53947005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               65-287
               

               Cow position:
               chr5:55019194-55019408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               67-184
               

               Cow position:
               chr5:72287011-72286890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               67-277
               

               Cow position:
               chr5:46681812-46681613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               67-277
               

               Cow position:
               chr5:46684044-46683845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               68-287
               

               Cow position:
               chr5:28035644-28035859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               71-263
               

               Cow position:
               chr5:57527012-57526832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               74-184
               

               Cow position:
               chr5:59257802-59257916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               74-263
               

               Cow position:
               chr5:50575694-50575876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               74-270
               

               Cow position:
               chr5:34192811-34193005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               74-288
               

               Cow position:
               chr5:63234920-63234712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               74-289
               

               Cow position:
               chr5:35125962-35126173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               85, 92
               

               Conread position:
               74-290
               

               Cow position:
               chr5:1087287-1087080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               75-184
               

               Cow position:
               chr5:23866766-23866655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               76-266
               

               Cow position:
               chr5:19752216-19752397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 53
               

               Conread position:
               76-291
               

               Cow position:
               chr5:61914481-61914684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               77-163
               

               Cow position:
               chr5:41884848-41884935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               77-291
               

               Cow position:
               chr5:43402812-43403025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 114
               

               Conread position:
               79-236
               

               Cow position:
               chr5:36250449-36250608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               95-293
               

               Cow position:
               chr5:67212286-67212483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               99-288
               

               Cow position:
               chr5:17267960-17267776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               101-277
               

               Cow position:
               chr5:59627038-59626865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               101-293
               

               Cow position:
               chr5:63025104-63024902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 152
               

               Conread position:
               101-341
               

               Cow position:
               chr5:1461023-1461274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 92
               

               Conread position:
               112-291
               

               Cow position:
               chr5:57156367-57156192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 76
               
Show alignments to all cow chromosomes.
Conread position:	1-122
Cow position:	chr5:23140737-23140618 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	98
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	77, 30
Conread position:	1-133
Cow position:	chr5:45026082-45025950 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	102
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	45, 117
Conread position:	1-134
Cow position:	chr5:63917575-63917441 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	108
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	50, 86
Conread position:	1-135
Cow position:	chr5:50870377-50870516 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	115
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	52, 0
Conread position:	1-136
Cow position:	chr5:37366733-37366872 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	112
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	57, 78
Conread position:	1-137
Cow position:	chr5:75828900-75828766 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	107
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	23, 74
Conread position:	1-142
Cow position:	chr5:61875342-61875207 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	114
Alignm E-value:	6e-27
Alignm gaps (pig, cow):	49, 0
Conread position:	1-146
Cow position:	chr5:63388630-63388775 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	116
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	54, 78
Conread position:	1-155
Cow position:	chr5:6986994-6987153 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	121
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	50, 78
Conread position:	1-156
Cow position:	chr5:12866993-12866827 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	131
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	52, 0
Conread position:	1-158
Cow position:	chr5:74019936-74019778 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	117
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	46, 0
Conread position:	1-159
Cow position:	chr5:8994730-8994573 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	127
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	45, 74
Conread position:	1-160
Cow position:	chr5:43816776-43816615 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	132
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	51, 111
Conread position:	1-162
Cow position:	chr5:35145188-35145346 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	126
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	40, 0
Conread position:	1-163
Cow position:	chr5:16668409-16668559 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	124
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	54, 0
Conread position:	1-164
Cow position:	chr5:3492037-3492193 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	132
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	79, 26
Conread position:	1-166
Cow position:	chr5:61600248-61600419 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	133
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	54, 158
Conread position:	1-167
Cow position:	chr5:45705883-45706047 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	127
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	31, 47
Conread position:	1-168
Cow position:	chr5:24616287-24616113 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	132
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	53, 156
Conread position:	1-175
Cow position:	chr5:34885320-34885150 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	131
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	45, 115