Non-Coding RNA Search

Cow genome map


           Conread name:
           rsin04_e10.y1
        

               Conread position:
               1-112
               

               Cow position:
               chr6:10649176-10649063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr6:46666952-46667083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr6:55607956-55607841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-134
               

               Cow position:
               chr6:7694505-7694365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-135
               

               Cow position:
               chr6:20605783-20605920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               1-136
               

               Cow position:
               chr6:1783923-1783792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               1-136
               

               Cow position:
               chr6:18904492-18904356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               1-142
               

               Cow position:
               chr6:54885063-54884919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-148
               

               Cow position:
               chr6:57274319-57274464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr6:46400555-46400409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr6:54864817-54864668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr6:2012869-2013022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-154
               

               Cow position:
               chr6:32210777-32210625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               1-156
               

               Cow position:
               chr6:389020-389179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 74
               

               Conread position:
               1-156
               

               Cow position:
               chr6:28148101-28148257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-156
               

               Cow position:
               chr6:52025804-52025647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-156
               

               Cow position:
               chr6:60456681-60456831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               1-156
               

               Cow position:
               chr6:66303997-66303837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               1-156
               

               Cow position:
               chr6:67574257-67574408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               1-157
               

               Cow position:
               chr6:61575453-61575615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 94
               

               Conread position:
               1-158
               

               Cow position:
               chr6:15923149-15922992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-158
               

               Cow position:
               chr6:53178487-53178642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               1-159
               

               Cow position:
               chr6:32916070-32915915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               1-161
               

               Cow position:
               chr6:37634639-37634794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr6:7103386-7103219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               57, 155
               

               Conread position:
               1-163
               

               Cow position:
               chr6:32987148-32986986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr6:39994611-39994450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-164
               

               Cow position:
               chr6:48344178-48344346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-167
               

               Cow position:
               chr6:10332246-10332075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 154
               

               Conread position:
               1-168
               

               Cow position:
               chr6:12927970-12928138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 42
               

               Conread position:
               1-173
               

               Cow position:
               chr6:59301975-59301798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-176
               

               Cow position:
               chr6:30826186-30826000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               1-180
               

               Cow position:
               chr6:16737870-16738054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               1-182
               

               Cow position:
               chr6:48187731-48187546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               1-184
               

               Cow position:
               chr6:242664-242841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               1-184
               

               Cow position:
               chr6:1886813-1886627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               1-184
               

               Cow position:
               chr6:10612716-10612893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               1-184
               

               Cow position:
               chr6:12629874-12630060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               1-184
               

               Cow position:
               chr6:18968925-18968741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               155, 32
               

               Conread position:
               1-184
               

               Cow position:
               chr6:18988066-18988251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               1-184
               

               Cow position:
               chr6:25773531-25773346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               157, 47
               

               Conread position:
               1-184
               

               Cow position:
               chr6:48567492-48567313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               1-184
               

               Cow position:
               chr6:49002875-49002693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               148, 24
               

               Conread position:
               1-184
               

               Cow position:
               chr6:49604532-49604715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               1-184
               

               Cow position:
               chr6:50119937-50119743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               1-184
               

               Cow position:
               chr6:54293961-54294141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr6:60442268-60442453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-186
               

               Cow position:
               chr6:54492609-54492423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 130
               

               Conread position:
               1-191
               

               Cow position:
               chr6:47540376-47540578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               1-191
               

               Cow position:
               chr6:53731371-53731571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-191
               

               Cow position:
               chr6:58076074-58076275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               1-192
               

               Cow position:
               chr6:50445913-50445718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr6:633511-633308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr6:5673079-5673296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr6:5958173-5957981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-193
               

               Cow position:
               chr6:8187669-8187473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               1-193
               

               Cow position:
               chr6:8804678-8804482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               156, 45
               

               Conread position:
               1-193
               

               Cow position:
               chr6:19563923-19563730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               1-193
               

               Cow position:
               chr6:45160442-45160249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               162, 45
               

               Conread position:
               1-193
               

               Cow position:
               chr6:47989035-47989219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               1-193
               

               Cow position:
               chr6:53710966-53711162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-193
               

               Cow position:
               chr6:57298870-57299062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               1-193
               

               Cow position:
               chr6:60239542-60239348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-193
               

               Cow position:
               chr6:60819365-60819560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 187
               

               Conread position:
               1-193
               

               Cow position:
               chr6:62324841-62325041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               1-193
               

               Cow position:
               chr6:62479316-62479113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 195
               

               Conread position:
               1-195
               

               Cow position:
               chr6:49685435-49685636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               1-205
               

               Cow position:
               chr6:14839180-14838974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               1-213
               

               Cow position:
               chr6:33302262-33302473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               1-215
               

               Cow position:
               chr6:61137221-61137434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               1-217
               

               Cow position:
               chr6:16411045-16411252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr6:62925143-62924921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               1-223
               

               Cow position:
               chr6:49694225-49694446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 175
               

               Conread position:
               1-224
               

               Cow position:
               chr6:30688757-30688547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr6:642727-642484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               52, 150
               

               Conread position:
               1-228
               

               Cow position:
               chr6:5445473-5445711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               1-228
               

               Cow position:
               chr6:7824610-7824838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-229
               

               Cow position:
               chr6:18961673-18961442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               1-229
               

               Cow position:
               chr6:37199689-37199454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 202
               

               Conread position:
               1-230
               

               Cow position:
               chr6:38614674-38614893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               1-232
               

               Cow position:
               chr6:68049285-68049507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               1-233
               

               Cow position:
               chr6:40760984-40761202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 56
               

               Conread position:
               1-236
               

               Cow position:
               chr6:19012919-19013151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               1-236
               

               Cow position:
               chr6:21542170-21542403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-236
               

               Cow position:
               chr6:28148693-28148915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               168, 25
               

               Conread position:
               1-237
               

               Cow position:
               chr6:11637898-11637675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-237
               

               Cow position:
               chr6:47150629-47150884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               1-238
               

               Cow position:
               chr6:607112-607345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 107
               

               Conread position:
               1-238
               

               Cow position:
               chr6:14850864-14850632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-238
               

               Cow position:
               chr6:44098934-44099168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               1-238
               

               Cow position:
               chr6:44984176-44984415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               1-250
               

               Cow position:
               chr6:24961995-24962238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-250
               

               Cow position:
               chr6:57405275-57405032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               1-252
               

               Cow position:
               chr6:6995096-6994856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               156, 31
               

               Conread position:
               1-253
               

               Cow position:
               chr6:21456840-21456587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               1-253
               

               Cow position:
               chr6:47026331-47026573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               1-253
               

               Cow position:
               chr6:53519773-53519528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               1-254
               

               Cow position:
               chr6:59108792-59109042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               1-257
               

               Cow position:
               chr6:27851855-27851605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               1-258
               

               Cow position:
               chr6:24223310-24223057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 171
               

               Conread position:
               1-259
               

               Cow position:
               chr6:65870874-65871139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 168
               

               Conread position:
               1-260
               

               Cow position:
               chr6:16423549-16423805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               1-261
               

               Cow position:
               chr6:61515348-61515084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               36, 181
               

               Conread position:
               1-262
               

               Cow position:
               chr6:20157175-20157438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 180
               

               Conread position:
               1-262
               

               Cow position:
               chr6:46860318-46860062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-262
               

               Cow position:
               chr6:59069778-59069519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               1-263
               

               Cow position:
               chr6:78062-77810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 164
               

               Conread position:
               1-263
               

               Cow position:
               chr6:130315-130057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               1-263
               

               Cow position:
               chr6:561468-561733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               50, 175
               

               Conread position:
               1-263
               

               Cow position:
               chr6:1499488-1499749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               1-263
               

               Cow position:
               chr6:16765542-16765290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               1-263
               

               Cow position:
               chr6:31535721-31535463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               1-263
               

               Cow position:
               chr6:48281845-48282098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               1-263
               

               Cow position:
               chr6:60850540-60850274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 192
               

               Conread position:
               1-263
               

               Cow position:
               chr6:60859456-60859195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               1-264
               

               Cow position:
               chr6:9452923-9452663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-264
               

               Cow position:
               chr6:10400045-10399803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               149, 33
               

               Conread position:
               1-264
               

               Cow position:
               chr6:13040303-13040547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-264
               

               Cow position:
               chr6:19264650-19264392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               1-264
               

               Cow position:
               chr6:21534909-21535146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr6:12337834-12338101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               1-265
               

               Cow position:
               chr6:17090445-17090707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-266
               

               Cow position:
               chr6:1703664-1703909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               1-266
               

               Cow position:
               chr6:3929169-3929427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               1-266
               

               Cow position:
               chr6:6343276-6343539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr6:6400798-6401060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               1-266
               

               Cow position:
               chr6:7128550-7128294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr6:9736790-9736548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr6:16700109-16700370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               1-266
               

               Cow position:
               chr6:20098114-20097850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-266
               

               Cow position:
               chr6:24781714-24781450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               24, 167
               

               Conread position:
               1-266
               

               Cow position:
               chr6:25008564-25008828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               1-266
               

               Cow position:
               chr6:26450167-26450421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr6:28977179-28976931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               164, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr6:36470713-36470453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               1-266
               

               Cow position:
               chr6:38207646-38207381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               1-266
               

               Cow position:
               chr6:38218522-38218775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               1-266
               

               Cow position:
               chr6:38441032-38441281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               1-266
               

               Cow position:
               chr6:40713652-40713394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               1-266
               

               Cow position:
               chr6:44078371-44078623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr6:46465678-46465930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr6:47519896-47520162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr6:48112054-48112305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr6:51674768-51675018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr6:52478577-52478302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               1-266
               

               Cow position:
               chr6:53651891-53652149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               1-266
               

               Cow position:
               chr6:60739865-60740123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               45, 173
               

               Conread position:
               1-266
               

               Cow position:
               chr6:63047426-63047701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               1-266
               

               Cow position:
               chr6:63720049-63720309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               150, 32
               

               Conread position:
               1-266
               

               Cow position:
               chr6:67214591-67214858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               1-267
               

               Cow position:
               chr6:323459-323195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 115
               

               Conread position:
               1-267
               

               Cow position:
               chr6:4692134-4691865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 199
               

               Conread position:
               1-267
               

               Cow position:
               chr6:12652056-12652318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-267
               

               Cow position:
               chr6:17997465-17997210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               1-269
               

               Cow position:
               chr6:13687961-13687700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               1-270
               

               Cow position:
               chr6:11169553-11169814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               1-270
               

               Cow position:
               chr6:22503073-22502798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 201
               

               Conread position:
               1-270
               

               Cow position:
               chr6:40774498-40774219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               1-270
               

               Cow position:
               chr6:44566262-44566537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               55, 203
               

               Conread position:
               1-270
               

               Cow position:
               chr6:50746830-50747110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               52, 189
               

               Conread position:
               1-270
               

               Cow position:
               chr6:67950809-67951062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               162, 30
               

               Conread position:
               1-271
               

               Cow position:
               chr6:54140663-54140911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               1-271
               

               Cow position:
               chr6:60783720-60783984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-272
               

               Cow position:
               chr6:10695717-10695975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-272
               

               Cow position:
               chr6:12543083-12542815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-272
               

               Cow position:
               chr6:30973891-30974157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               1-272
               

               Cow position:
               chr6:31854202-31854469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               1-272
               

               Cow position:
               chr6:61631763-61631494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               1-272
               

               Cow position:
               chr6:63272764-63272497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               1-275
               

               Cow position:
               chr6:2607463-2607724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               1-275
               

               Cow position:
               chr6:3595644-3595909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               1-275
               

               Cow position:
               chr6:3978817-3978526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 257
               

               Conread position:
               1-275
               

               Cow position:
               chr6:35471673-35471392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-275
               

               Cow position:
               chr6:52412704-52412977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               54, 176
               

               Conread position:
               1-275
               

               Cow position:
               chr6:55546311-55546057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-277
               

               Cow position:
               chr6:899440-899173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-277
               

               Cow position:
               chr6:14696522-14696245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 126
               

               Conread position:
               1-277
               

               Cow position:
               chr6:15305432-15305688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               1-277
               

               Cow position:
               chr6:23248113-23247846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-277
               

               Cow position:
               chr6:23695847-23696120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               150, 40
               

               Conread position:
               1-277
               

               Cow position:
               chr6:24468547-24468276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-277
               

               Cow position:
               chr6:29210351-29210615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               1-277
               

               Cow position:
               chr6:36652269-36652541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               1-277
               

               Cow position:
               chr6:41733477-41733752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               1-277
               

               Cow position:
               chr6:44194695-44194429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               1-277
               

               Cow position:
               chr6:52431182-52430902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 193
               

               Conread position:
               1-277
               

               Cow position:
               chr6:54701390-54701661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               1-277
               

               Cow position:
               chr6:55763704-55763973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               1-277
               

               Cow position:
               chr6:59104458-59104722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               1-281
               

               Cow position:
               chr6:51387612-51387873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr6:6098432-6098139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               1-284
               

               Cow position:
               chr6:8965939-8966224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               1-284
               

               Cow position:
               chr6:15782675-15782388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 245
               

               Conread position:
               1-284
               

               Cow position:
               chr6:47305189-47305467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               1-284
               

               Cow position:
               chr6:47574755-47575033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-284
               

               Cow position:
               chr6:60057806-60057528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               1-285
               

               Cow position:
               chr6:16103352-16103069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               1-286
               

               Cow position:
               chr6:120089-120374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               1-286
               

               Cow position:
               chr6:4864690-4864418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-286
               

               Cow position:
               chr6:5609590-5609318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               1-286
               

               Cow position:
               chr6:8637125-8637410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               1-286
               

               Cow position:
               chr6:10106146-10105850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 165
               

               Conread position:
               1-286
               

               Cow position:
               chr6:14958499-14958211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-286
               

               Cow position:
               chr6:21231386-21231653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1-286
               

               Cow position:
               chr6:31525898-31526175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               156, 54
               

               Conread position:
               1-286
               

               Cow position:
               chr6:38771144-38771409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               148, 30
               

               Conread position:
               1-286
               

               Cow position:
               chr6:49398766-49398491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               1-287
               

               Cow position:
               chr6:415944-416255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               52, 265
               

               Conread position:
               1-287
               

               Cow position:
               chr6:10176453-10176172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               1-287
               

               Cow position:
               chr6:12668957-12669225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               1-287
               

               Cow position:
               chr6:16706857-16707142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               1-287
               

               Cow position:
               chr6:37783268-37783530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               1-287
               

               Cow position:
               chr6:66131158-66131436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               1-288
               

               Cow position:
               chr6:5114197-5113922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               1-288
               

               Cow position:
               chr6:6060707-6060441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-288
               

               Cow position:
               chr6:9008761-9008481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-288
               

               Cow position:
               chr6:9751190-9750926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 33
               

               Conread position:
               1-288
               

               Cow position:
               chr6:15242682-15242967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               1-288
               

               Cow position:
               chr6:15300967-15300702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               1-288
               

               Cow position:
               chr6:19292662-19292932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               1-288
               

               Cow position:
               chr6:19446110-19446381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               1-288
               

               Cow position:
               chr6:21110820-21111082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-288
               

               Cow position:
               chr6:24004397-24004667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               1-288
               

               Cow position:
               chr6:27815619-27815339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               156, 42
               

               Conread position:
               1-288
               

               Cow position:
               chr6:32125917-32126186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               1-288
               

               Cow position:
               chr6:33918001-33917708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               1-288
               

               Cow position:
               chr6:34196298-34196018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 45
               

               Conread position:
               1-288
               

               Cow position:
               chr6:38641348-38641623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               1-288
               

               Cow position:
               chr6:39093594-39093882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               143, 30
               

               Conread position:
               1-288
               

               Cow position:
               chr6:47339498-47339225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               154, 32
               

               Conread position:
               1-288
               

               Cow position:
               chr6:47355674-47355953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-288
               

               Cow position:
               chr6:47383851-47384137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 175
               

               Conread position:
               1-288
               

               Cow position:
               chr6:54991152-54990870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               1-288
               

               Cow position:
               chr6:67430039-67429747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 148
               

               Conread position:
               1-289
               

               Cow position:
               chr6:445161-445455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 185
               

               Conread position:
               1-290
               

               Cow position:
               chr6:6264495-6264786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               149, 45
               

               Conread position:
               1-290
               

               Cow position:
               chr6:15447358-15447065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               52, 85
               

               Conread position:
               1-290
               

               Cow position:
               chr6:36202678-36202951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-290
               

               Cow position:
               chr6:52901091-52901371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               152, 9
               

               Conread position:
               1-291
               

               Cow position:
               chr6:3952372-3952652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-291
               

               Cow position:
               chr6:4383342-4383613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-291
               

               Cow position:
               chr6:5095700-5095408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               1-291
               

               Cow position:
               chr6:8125182-8125460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               1-291
               

               Cow position:
               chr6:11246614-11246901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               1-291
               

               Cow position:
               chr6:12092134-12091859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               1-291
               

               Cow position:
               chr6:14949631-14949347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 120
               

               Conread position:
               1-291
               

               Cow position:
               chr6:15938003-15937721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 138
               

               Conread position:
               1-291
               

               Cow position:
               chr6:19695656-19695940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-291
               

               Cow position:
               chr6:21587571-21587297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               1-291
               

               Cow position:
               chr6:27888198-27888485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 104
               

               Conread position:
               1-291
               

               Cow position:
               chr6:28482865-28483150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               55, 189
               

               Conread position:
               1-291
               

               Cow position:
               chr6:34475704-34475427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               1-291
               

               Cow position:
               chr6:35181403-35181123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               159, 30
               

               Conread position:
               1-291
               

               Cow position:
               chr6:42565535-42565822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 175
               

               Conread position:
               1-291
               

               Cow position:
               chr6:50984074-50984356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               1-291
               

               Cow position:
               chr6:51581407-51581121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-291
               

               Cow position:
               chr6:51835250-51835533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-291
               

               Cow position:
               chr6:51893655-51893366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               55, 172
               

               Conread position:
               1-291
               

               Cow position:
               chr6:53932998-53932713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               1-291
               

               Cow position:
               chr6:58590124-58590407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               1-291
               

               Cow position:
               chr6:60350449-60350158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-291
               

               Cow position:
               chr6:64431789-64432072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-291
               

               Cow position:
               chr6:66433798-66434085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               1-292
               

               Cow position:
               chr6:58073895-58074183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               1-292
               

               Cow position:
               chr6:65264685-65264411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               1-293
               

               Cow position:
               chr6:7190269-7189983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 60
               

               Conread position:
               1-294
               

               Cow position:
               chr6:19401712-19401985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-347
               

               Cow position:
               chr6:31847370-31847004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               1-353
               

               Cow position:
               chr6:6460389-6460752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               54, 76
               

               Conread position:
               1-353
               

               Cow position:
               chr6:7989566-7989221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               51, 154
               

               Conread position:
               1-354
               

               Cow position:
               chr6:64449239-64449606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               1-356
               

               Cow position:
               chr6:57164277-57164638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               1-357
               

               Cow position:
               chr6:48807145-48806782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               1-358
               

               Cow position:
               chr6:12500710-12501080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               1-358
               

               Cow position:
               chr6:28477032-28477401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               1-360
               

               Cow position:
               chr6:56843009-56843373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               195, 34
               

               Conread position:
               2-148
               

               Cow position:
               chr6:53139078-53138924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr6:33276888-33277050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-158
               

               Cow position:
               chr6:58364161-58364003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               2-159
               

               Cow position:
               chr6:36928502-36928664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               2-161
               

               Cow position:
               chr6:63094078-63093915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               2-164
               

               Cow position:
               chr6:20230975-20230815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               77, 29
               

               Conread position:
               2-173
               

               Cow position:
               chr6:24327287-24327119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               2-184
               

               Cow position:
               chr6:10254090-10254280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               2-184
               

               Cow position:
               chr6:21311907-21311719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 145
               

               Conread position:
               2-184
               

               Cow position:
               chr6:24515342-24515159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               2-186
               

               Cow position:
               chr6:58732463-58732270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-193
               

               Cow position:
               chr6:13741546-13741748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 194
               

               Conread position:
               2-193
               

               Cow position:
               chr6:32335657-32335848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 22
               

               Conread position:
               2-222
               

               Cow position:
               chr6:42961516-42961290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               44, 122
               

               Conread position:
               2-224
               

               Cow position:
               chr6:9839013-9839240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 190
               

               Conread position:
               2-226
               

               Cow position:
               chr6:9219124-9219342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 94
               

               Conread position:
               2-239
               

               Cow position:
               chr6:52248284-52248049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               2-242
               

               Cow position:
               chr6:67968763-67968524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               2-252
               

               Cow position:
               chr6:31635834-31635593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               153, 31
               

               Conread position:
               2-260
               

               Cow position:
               chr6:22254136-22253860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               2-264
               

               Cow position:
               chr6:54490889-54490628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               2-265
               

               Cow position:
               chr6:528426-528176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               2-266
               

               Cow position:
               chr6:32121762-32122016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               2-267
               

               Cow position:
               chr6:2547091-2547365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               2-267
               

               Cow position:
               chr6:37149044-37149299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-272
               

               Cow position:
               chr6:35539656-35539394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 47
               

               Conread position:
               2-275
               

               Cow position:
               chr6:1770348-1770080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 95
               

               Conread position:
               2-275
               

               Cow position:
               chr6:48988284-48988548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 173
               

               Conread position:
               2-284
               

               Cow position:
               chr6:56376499-56376222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               2-284
               

               Cow position:
               chr6:65259617-65259364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               2-286
               

               Cow position:
               chr6:12551117-12551398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               47, 75
               

               Conread position:
               2-286
               

               Cow position:
               chr6:26915181-26915457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               2-288
               

               Cow position:
               chr6:35435855-35436125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               2-288
               

               Cow position:
               chr6:35990372-35990103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               226, 29
               

               Conread position:
               2-291
               

               Cow position:
               chr6:16764791-16764512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               154, 29
               

               Conread position:
               2-360
               

               Cow position:
               chr6:8788186-8787819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 139
               

               Conread position:
               3-179
               

               Cow position:
               chr6:66431689-66431851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               160, 28
               

               Conread position:
               3-266
               

               Cow position:
               chr6:61608359-61608621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               3-266
               

               Cow position:
               chr6:63299174-63298922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               3-268
               

               Cow position:
               chr6:17313582-17313846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               3-270
               

               Cow position:
               chr6:35993429-35993697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 129
               

               Conread position:
               3-275
               

               Cow position:
               chr6:54036283-54036025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               3-275
               

               Cow position:
               chr6:61113602-61113885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               3-280
               

               Cow position:
               chr6:25407540-25407268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 189
               

               Conread position:
               3-286
               

               Cow position:
               chr6:46283146-46282875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               193, 40
               

               Conread position:
               3-288
               

               Cow position:
               chr6:14914387-14914105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               3-288
               

               Cow position:
               chr6:54867362-54867648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 195
               

               Conread position:
               3-358
               

               Cow position:
               chr6:28080045-28079685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               3-358
               

               Cow position:
               chr6:47640585-47640217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               3-359
               

               Cow position:
               chr6:54369048-54368692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               4-161
               

               Cow position:
               chr6:17345223-17345376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               4-286
               

               Cow position:
               chr6:57571326-57571608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               4-291
               

               Cow position:
               chr6:17817132-17816860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               5-160
               

               Cow position:
               chr6:29266059-29266213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               5-193
               

               Cow position:
               chr6:40834619-40834421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 81
               

               Conread position:
               5-277
               

               Cow position:
               chr6:34251433-34251180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               74, 28
               

               Conread position:
               5-291
               

               Cow position:
               chr6:16316160-16316450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               6-163
               

               Cow position:
               chr6:602948-603102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               6-193
               

               Cow position:
               chr6:19755222-19755034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               6-261
               

               Cow position:
               chr6:13592565-13592813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               6-272
               

               Cow position:
               chr6:7173902-7173635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               6-274
               

               Cow position:
               chr6:582412-582156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               6-284
               

               Cow position:
               chr6:48573029-48572753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               6-288
               

               Cow position:
               chr6:19681672-19681394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               6-288
               

               Cow position:
               chr6:21230821-21231105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               7-228
               

               Cow position:
               chr6:44756894-44757111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               7-275
               

               Cow position:
               chr6:17334201-17333935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               7-278
               

               Cow position:
               chr6:54365472-54365207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               7-288
               

               Cow position:
               chr6:16191522-16191802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               7-291
               

               Cow position:
               chr6:26728674-26728398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               7-291
               

               Cow position:
               chr6:40032045-40032324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               8-254
               

               Cow position:
               chr6:24934773-24934529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               8-258
               

               Cow position:
               chr6:4559446-4559204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               8-258
               

               Cow position:
               chr6:48169802-48170039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               8-283
               

               Cow position:
               chr6:19996477-19996740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               8-291
               

               Cow position:
               chr6:13367150-13367419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               9-163
               

               Cow position:
               chr6:50509536-50509686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               9-263
               

               Cow position:
               chr6:38609826-38610074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               10-247
               

               Cow position:
               chr6:43188751-43188986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 159
               

               Conread position:
               10-263
               

               Cow position:
               chr6:16746195-16746449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               48, 139
               

               Conread position:
               10-263
               

               Cow position:
               chr6:22332538-22332292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               10-266
               

               Cow position:
               chr6:45596679-45596423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               36, 189
               

               Conread position:
               10-285
               

               Cow position:
               chr6:4468614-4468896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 177
               

               Conread position:
               10-291
               

               Cow position:
               chr6:67187544-67187818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               11-164
               

               Cow position:
               chr6:55508720-55508561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               11-284
               

               Cow position:
               chr6:28156286-28156036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               11-291
               

               Cow position:
               chr6:8562576-8562853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               13-234
               

               Cow position:
               chr6:48803779-48803555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               13-270
               

               Cow position:
               chr6:1371369-1371113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 37
               

               Conread position:
               13-284
               

               Cow position:
               chr6:63197310-63197036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 187
               

               Conread position:
               13-291
               

               Cow position:
               chr6:67456571-67456852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 186
               

               Conread position:
               14-266
               

               Cow position:
               chr6:55282427-55282184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               14-288
               

               Cow position:
               chr6:21004528-21004807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               15-272
               

               Cow position:
               chr6:60118010-60118265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               16-159
               

               Cow position:
               chr6:1907405-1907550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               16-207
               

               Cow position:
               chr6:6642732-6642543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               125, 17
               

               Conread position:
               16-218
               

               Cow position:
               chr6:21052641-21052445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               16-261
               

               Cow position:
               chr6:21399892-21399652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 115
               

               Conread position:
               16-277
               

               Cow position:
               chr6:46865732-46865472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 153
               

               Conread position:
               17-270
               

               Cow position:
               chr6:45388192-45388438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               19-233
               

               Cow position:
               chr6:34075882-34076107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 187
               

               Conread position:
               19-275
               

               Cow position:
               chr6:16261650-16261896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 108
               

               Conread position:
               19-288
               

               Cow position:
               chr6:21234908-21235174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               20-266
               

               Cow position:
               chr6:32269010-32268779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               20-277
               

               Cow position:
               chr6:54647657-54647384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               37, 235
               

               Conread position:
               23-184
               

               Cow position:
               chr6:53841631-53841467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               23-288
               

               Cow position:
               chr6:21062020-21061755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 179
               

               Conread position:
               23-290
               

               Cow position:
               chr6:6067814-6067569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               23-340
               

               Cow position:
               chr6:12829354-12829035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               24-237
               

               Cow position:
               chr6:44127479-44127692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 154
               

               Conread position:
               24-267
               

               Cow position:
               chr6:377006-377235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               133, 26
               

               Conread position:
               24-287
               

               Cow position:
               chr6:31564464-31564208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               168, 47
               

               Conread position:
               25-263
               

               Cow position:
               chr6:60667291-60667519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               26-159
               

               Cow position:
               chr6:2423614-2423751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               26-277
               

               Cow position:
               chr6:62669745-62669985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               23, 47
               

               Conread position:
               28-277
               

               Cow position:
               chr6:50467008-50467255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               29-288
               

               Cow position:
               chr6:10225765-10225525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               32-155
               

               Cow position:
               chr6:14153240-14153118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               33-277
               

               Cow position:
               chr6:6063407-6063174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               34-196
               

               Cow position:
               chr6:19351275-19351104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               34-229
               

               Cow position:
               chr6:56849893-56850096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               34-257
               

               Cow position:
               chr6:46292463-46292248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               34-263
               

               Cow position:
               chr6:16266602-16266830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 144
               

               Conread position:
               34-266
               

               Cow position:
               chr6:20206155-20206384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 144
               

               Conread position:
               34-266
               

               Cow position:
               chr6:45065135-45064908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               34-275
               

               Cow position:
               chr6:18049151-18048906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               34-277
               

               Cow position:
               chr6:36189576-36189817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               34-291
               

               Cow position:
               chr6:35725974-35726228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               34-293
               

               Cow position:
               chr6:66874230-66874486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               35-184
               

               Cow position:
               chr6:38233840-38233998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               35-191
               

               Cow position:
               chr6:54287956-54288118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               35-254
               

               Cow position:
               chr6:32287518-32287736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               35-275
               

               Cow position:
               chr6:17704705-17704949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               35-291
               

               Cow position:
               chr6:35842530-35842792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 168
               

               Conread position:
               35-291
               

               Cow position:
               chr6:47799171-47799427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               35-352
               

               Cow position:
               chr6:28318287-28318601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               37-288
               

               Cow position:
               chr6:59718683-59718927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               38-277
               

               Cow position:
               chr6:62371293-62371061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               49, 157
               

               Conread position:
               38-288
               

               Cow position:
               chr6:12845262-12845506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 158
               

               Conread position:
               39-155
               

               Cow position:
               chr6:9732956-9732839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               39-272
               

               Cow position:
               chr6:61269203-61269427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 16
               

               Conread position:
               43-287
               

               Cow position:
               chr6:66531928-66531692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               44-277
               

               Cow position:
               chr6:27240112-27239886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               45-263
               

               Cow position:
               chr6:17557276-17557487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               110, 129
               

               Conread position:
               45-265
               

               Cow position:
               chr6:26043647-26043846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               45-285
               

               Cow position:
               chr6:5413714-5413951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               45-286
               

               Cow position:
               chr6:59603312-59603079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               45-288
               

               Cow position:
               chr6:23402094-23401862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               45-288
               

               Cow position:
               chr6:54573138-54573390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               100, 205
               

               Conread position:
               45-291
               

               Cow position:
               chr6:10039616-10039857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               45-291
               

               Cow position:
               chr6:21514724-21514474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 138
               

               Conread position:
               46-280
               

               Cow position:
               chr6:29239835-29240062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               46-286
               

               Cow position:
               chr6:7119714-7119490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               46-286
               

               Cow position:
               chr6:58597608-58597377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               46-291
               

               Cow position:
               chr6:43345550-43345308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               47-159
               

               Cow position:
               chr6:61644939-61644824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               47-238
               

               Cow position:
               chr6:58370650-58370840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               102, 143
               

               Conread position:
               49-288
               

               Cow position:
               chr6:22215573-22215340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 106
               

               Conread position:
               53-287
               

               Cow position:
               chr6:17794853-17794634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               55-288
               

               Cow position:
               chr6:17549076-17548843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               56-270
               

               Cow position:
               chr6:54208233-54208022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               56-275
               

               Cow position:
               chr6:62929402-62929613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               56-286
               

               Cow position:
               chr6:66375424-66375204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               56-288
               

               Cow position:
               chr6:44867635-44867412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               95, 133
               

               Conread position:
               57-222
               

               Cow position:
               chr6:12545950-12545788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               57-277
               

               Cow position:
               chr6:58608538-58608324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 134
               

               Conread position:
               57-291
               

               Cow position:
               chr6:1429546-1429774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               58-286
               

               Cow position:
               chr6:143460-143246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               61-184
               

               Cow position:
               chr6:21559597-21559472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               62-230
               

               Cow position:
               chr6:6673014-6673176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               62-266
               

               Cow position:
               chr6:10487499-10487697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               63-271
               

               Cow position:
               chr6:4389820-4390028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               96, 126
               

               Conread position:
               64-288
               

               Cow position:
               chr6:37462936-37463153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               66-291
               

               Cow position:
               chr6:13565000-13565220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               97, 8
               

               Conread position:
               67-265
               

               Cow position:
               chr6:40049985-40050183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               86, 135
               

               Conread position:
               67-275
               

               Cow position:
               chr6:46173336-46173141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               68-288
               

               Cow position:
               chr6:35103416-35103197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               130, 88
               

               Conread position:
               70-288
               

               Cow position:
               chr6:33929630-33929416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               71-254
               

               Cow position:
               chr6:28283785-28283958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               71-256
               

               Cow position:
               chr6:54365083-54364893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               107, 127
               

               Conread position:
               71-266
               

               Cow position:
               chr6:2623702-2623882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               74-232
               

               Cow position:
               chr6:46998215-46998063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               74-277
               

               Cow position:
               chr6:8599928-8600119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 113
               

               Conread position:
               74-277
               

               Cow position:
               chr6:24339207-24339403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               74-289
               

               Cow position:
               chr6:5330338-5330544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               74-327
               

               Cow position:
               chr6:41375693-41375940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               228, 120
               

               Conread position:
               75-289
               

               Cow position:
               chr6:37395483-37395268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               76-270
               

               Cow position:
               chr6:16288127-16287948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               76-275
               

               Cow position:
               chr6:54600271-54600466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               78-266
               

               Cow position:
               chr6:17068722-17068539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 99
               

               Conread position:
               78-266
               

               Cow position:
               chr6:67281824-67282003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 105
               

               Conread position:
               82-284
               

               Cow position:
               chr6:61142633-61142435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               124, 110
               

               Conread position:
               85-235
               

               Cow position:
               chr6:26765080-26764935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               85-267
               

               Cow position:
               chr6:36284176-36284353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               87-266
               

               Cow position:
               chr6:60468173-60468347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 79
               

               Conread position:
               93-288
               

               Cow position:
               chr6:18144135-18144328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               95-288
               

               Cow position:
               chr6:17527644-17527458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               96-266
               

               Cow position:
               chr6:68652408-68652242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               118-258
               

               Cow position:
               chr6:8094324-8094188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               40, 75
               
Show alignments to all cow chromosomes.
Conread position:	1-112
Cow position:	chr6:10649176-10649063 (view UCSC Genome Browser custom track)
Alignm length:	114
Alignm identity:	97
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	55, 0
Conread position:	1-122
Cow position:	chr6:46666952-46667083 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	106
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	50, 0
Conread position:	1-134
Cow position:	chr6:7694505-7694365 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	112
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	54, 0
Conread position:	1-135
Cow position:	chr6:20605783-20605920 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	108
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	52, 77
Conread position:	1-136
Cow position:	chr6:1783923-1783792 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	113
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	24, 31
Conread position:	1-142
Cow position:	chr6:54885063-54884919 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	113
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	45, 0
Conread position:	1-148
Cow position:	chr6:57274319-57274464 (view UCSC Genome Browser custom track)
Alignm length:	148
Alignm identity:	108
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	45, 0
Conread position:	1-153
Cow position:	chr6:46400555-46400409 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	117
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	30, 0
Conread position:	1-154
Cow position:	chr6:2012869-2013022 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	116
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	45, 74
Conread position:	1-156
Cow position:	chr6:389020-389179 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	121
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	38, 74
Conread position:	1-157
Cow position:	chr6:61575453-61575615 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	126
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	52, 94
Conread position:	1-158
Cow position:	chr6:15923149-15922992 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	122
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	45, 74
Conread position:	1-159
Cow position:	chr6:32916070-32915915 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	122
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	45, 32
Conread position:	1-161
Cow position:	chr6:37634639-37634794 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	120
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	30, 0
Conread position:	1-163
Cow position:	chr6:7103386-7103219 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	130
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	57, 155
Conread position:	1-164
Cow position:	chr6:48344178-48344346 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	133
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	48, 78
Conread position:	1-167
Cow position:	chr6:10332246-10332075 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	132
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	61, 154
Conread position:	1-168
Cow position:	chr6:12927970-12928138 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	128
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	153, 42
Conread position:	1-173
Cow position:	chr6:59301975-59301798 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	105
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	54, 0
Conread position:	1-176
Cow position:	chr6:30826186-30826000 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	146
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	39, 11