Non-Coding RNA Search

Cow genome map


           Conread name:
           rsin04_e10.y1
        

               Conread position:
               1-114
               

               Cow position:
               chrX:42855245-42855365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-120
               

               Cow position:
               chrX:22482852-22482730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               1-123
               

               Cow position:
               chrX:41271371-41271248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-135
               

               Cow position:
               chrX:2206707-2206581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-138
               

               Cow position:
               chrX:24149476-24149615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               1-142
               

               Cow position:
               chrX:38967487-38967626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               1-148
               

               Cow position:
               chrX:35273189-35273339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-149
               

               Cow position:
               chrX:48684386-48684239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               1-153
               

               Cow position:
               chrX:47453963-47454119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-156
               

               Cow position:
               chrX:42282269-42282420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               1-156
               

               Cow position:
               chrX:46315544-46315385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               1-156
               

               Cow position:
               chrX:47054694-47054535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               1-157
               

               Cow position:
               chrX:14924836-14924994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-158
               

               Cow position:
               chrX:32020285-32020126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               1-159
               

               Cow position:
               chrX:1505548-1505704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               1-159
               

               Cow position:
               chrX:20582867-20583015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-159
               

               Cow position:
               chrX:21665757-21665599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               1-159
               

               Cow position:
               chrX:29509607-29509445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-159
               

               Cow position:
               chrX:35609823-35609984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               1-159
               

               Cow position:
               chrX:47248948-47248790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               1-160
               

               Cow position:
               chrX:19019274-19019109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-161
               

               Cow position:
               chrX:25238013-25238167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               1-161
               

               Cow position:
               chrX:35284460-35284617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-163
               

               Cow position:
               chrX:8991724-8991884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               1-166
               

               Cow position:
               chrX:40183513-40183342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               1-168
               

               Cow position:
               chrX:15485790-15485621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               1-171
               

               Cow position:
               chrX:42339099-42338936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-182
               

               Cow position:
               chrX:17497933-17498109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               123, 30
               

               Conread position:
               1-182
               

               Cow position:
               chrX:40647814-40648010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               1-183
               

               Cow position:
               chrX:42461909-42461719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-184
               

               Cow position:
               chrX:2383325-2383511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               1-184
               

               Cow position:
               chrX:7718691-7718875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-184
               

               Cow position:
               chrX:26285816-26286007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               1-184
               

               Cow position:
               chrX:30833009-30832826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               161, 71
               

               Conread position:
               1-184
               

               Cow position:
               chrX:42874814-42875009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-184
               

               Cow position:
               chrX:43049181-43049369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-184
               

               Cow position:
               chrX:45414463-45414278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-184
               

               Cow position:
               chrX:45874835-45875024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               1-185
               

               Cow position:
               chrX:35542728-35542922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-190
               

               Cow position:
               chrX:9997497-9997309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               1-192
               

               Cow position:
               chrX:35042056-35042253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 169
               

               Conread position:
               1-193
               

               Cow position:
               chrX:10306507-10306711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               1-193
               

               Cow position:
               chrX:14003808-14003612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               1-193
               

               Cow position:
               chrX:15139708-15139513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-193
               

               Cow position:
               chrX:17908447-17908254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               157, 26
               

               Conread position:
               1-193
               

               Cow position:
               chrX:27516369-27516566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               1-193
               

               Cow position:
               chrX:37750417-37750220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               154, 53
               

               Conread position:
               1-193
               

               Cow position:
               chrX:37836424-37836620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 188
               

               Conread position:
               1-193
               

               Cow position:
               chrX:40452376-40452184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               1-206
               

               Cow position:
               chrX:14973896-14973693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               155, 16
               

               Conread position:
               1-206
               

               Cow position:
               chrX:24424551-24424348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               1-207
               

               Cow position:
               chrX:27772124-27771913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 82
               

               Conread position:
               1-210
               

               Cow position:
               chrX:4768587-4768792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               152, 16
               

               Conread position:
               1-210
               

               Cow position:
               chrX:24288096-24287878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-210
               

               Cow position:
               chrX:35413469-35413669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               1-210
               

               Cow position:
               chrX:36961472-36961696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-210
               

               Cow position:
               chrX:38071934-38071711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-212
               

               Cow position:
               chrX:28836065-28835859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               166, 68
               

               Conread position:
               1-212
               

               Cow position:
               chrX:29563534-29563326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 92
               

               Conread position:
               1-217
               

               Cow position:
               chrX:40116258-40116475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-219
               

               Cow position:
               chrX:19015279-19015487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               164, 17
               

               Conread position:
               1-220
               

               Cow position:
               chrX:5017571-5017360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-225
               

               Cow position:
               chrX:9855137-9855354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               1-225
               

               Cow position:
               chrX:9953978-9954195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 122
               

               Conread position:
               1-226
               

               Cow position:
               chrX:8070865-8070642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 167
               

               Conread position:
               1-229
               

               Cow position:
               chrX:9425905-9425683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 74
               

               Conread position:
               1-229
               

               Cow position:
               chrX:16790001-16789784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               155, 32
               

               Conread position:
               1-229
               

               Cow position:
               chrX:19188773-19188991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 157
               

               Conread position:
               1-229
               

               Cow position:
               chrX:21593120-21593347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               52, 185
               

               Conread position:
               1-229
               

               Cow position:
               chrX:41167128-41166902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-229
               

               Cow position:
               chrX:41992205-41991975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               1-230
               

               Cow position:
               chrX:46146724-46146500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               1-232
               

               Cow position:
               chrX:39938686-39938460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               45, 92
               

               Conread position:
               1-234
               

               Cow position:
               chrX:7508975-7509208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               1-235
               

               Cow position:
               chrX:25232427-25232659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-236
               

               Cow position:
               chrX:14900885-14900666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-236
               

               Cow position:
               chrX:23785490-23785714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               1-238
               

               Cow position:
               chrX:5638329-5638100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               54, 49
               

               Conread position:
               1-238
               

               Cow position:
               chrX:6234612-6234380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               1-239
               

               Cow position:
               chrX:678731-678485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 74
               

               Conread position:
               1-239
               

               Cow position:
               chrX:4398962-4399196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-239
               

               Cow position:
               chrX:13785521-13785290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               159, 21
               

               Conread position:
               1-239
               

               Cow position:
               chrX:26876046-26875811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-247
               

               Cow position:
               chrX:48035264-48035503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               1-249
               

               Cow position:
               chrX:19930492-19930732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-253
               

               Cow position:
               chrX:16416343-16416592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 102
               

               Conread position:
               1-254
               

               Cow position:
               chrX:13265783-13265543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               1-254
               

               Cow position:
               chrX:42507810-42507564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               1-255
               

               Cow position:
               chrX:619171-618917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-257
               

               Cow position:
               chrX:7497080-7497330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-257
               

               Cow position:
               chrX:17541800-17542047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               1-257
               

               Cow position:
               chrX:29542382-29542130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               1-258
               

               Cow position:
               chrX:10128841-10129096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 174
               

               Conread position:
               1-260
               

               Cow position:
               chrX:20709908-20710164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-260
               

               Cow position:
               chrX:48236648-48236908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               1-261
               

               Cow position:
               chrX:31949094-31948844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               1-263
               

               Cow position:
               chrX:1176146-1175890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-263
               

               Cow position:
               chrX:22812897-22813155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               1-263
               

               Cow position:
               chrX:23299791-23300051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               56, 151
               

               Conread position:
               1-263
               

               Cow position:
               chrX:32329994-32330259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               1-263
               

               Cow position:
               chrX:37843557-37843810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 123
               

               Conread position:
               1-263
               

               Cow position:
               chrX:40809523-40809786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               1-264
               

               Cow position:
               chrX:24365997-24365727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 200
               

               Conread position:
               1-264
               

               Cow position:
               chrX:25208010-25207761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               1-265
               

               Cow position:
               chrX:6488423-6488671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               1-265
               

               Cow position:
               chrX:17725811-17726070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-265
               

               Cow position:
               chrX:34401834-34402095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               1-265
               

               Cow position:
               chrX:41238529-41238260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 127
               

               Conread position:
               1-266
               

               Cow position:
               chrX:1499506-1499761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               1-266
               

               Cow position:
               chrX:7336665-7336937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               1-266
               

               Cow position:
               chrX:7571743-7572001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               162, 45
               

               Conread position:
               1-266
               

               Cow position:
               chrX:10831660-10831391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               1-266
               

               Cow position:
               chrX:13912917-13913171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               158, 70
               

               Conread position:
               1-266
               

               Cow position:
               chrX:14884125-14883860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               1-266
               

               Cow position:
               chrX:17630966-17630705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 74
               

               Conread position:
               1-266
               

               Cow position:
               chrX:23514178-23513921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-266
               

               Cow position:
               chrX:25338016-25338283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               1-266
               

               Cow position:
               chrX:26440943-26440689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               50, 186
               

               Conread position:
               1-266
               

               Cow position:
               chrX:27394177-27393930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               1-266
               

               Cow position:
               chrX:27432082-27431822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               24, 79
               

               Conread position:
               1-266
               

               Cow position:
               chrX:38094690-38094424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               52, 186
               

               Conread position:
               1-266
               

               Cow position:
               chrX:38218544-38218810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               1-266
               

               Cow position:
               chrX:40481036-40480776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               1-266
               

               Cow position:
               chrX:42235697-42235428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               1-266
               

               Cow position:
               chrX:43780016-43779751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               24, 195
               

               Conread position:
               1-266
               

               Cow position:
               chrX:45501985-45502242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               1-267
               

               Cow position:
               chrX:151738-151998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               1-267
               

               Cow position:
               chrX:3654441-3654705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 83
               

               Conread position:
               1-267
               

               Cow position:
               chrX:12290572-12290816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               1-267
               

               Cow position:
               chrX:18485631-18485900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               1-267
               

               Cow position:
               chrX:21004518-21004781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               1-267
               

               Cow position:
               chrX:21672388-21672657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               56, 192
               

               Conread position:
               1-267
               

               Cow position:
               chrX:24259745-24259482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               1-270
               

               Cow position:
               chrX:11633515-11633782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 194
               

               Conread position:
               1-270
               

               Cow position:
               chrX:29289413-29289678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 98
               

               Conread position:
               1-270
               

               Cow position:
               chrX:32420055-32420312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               1-270
               

               Cow position:
               chrX:41673941-41674204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 191
               

               Conread position:
               1-270
               

               Cow position:
               chrX:44054638-44054902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-270
               

               Cow position:
               chrX:47344131-47344396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               1-270
               

               Cow position:
               chrX:47873505-47873236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               1-270
               

               Cow position:
               chrX:48010431-48010704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               40, 195
               

               Conread position:
               1-271
               

               Cow position:
               chrX:2467716-2467985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 136
               

               Conread position:
               1-272
               

               Cow position:
               chrX:161258-161514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-272
               

               Cow position:
               chrX:754795-755066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 175
               

               Conread position:
               1-272
               

               Cow position:
               chrX:11717946-11717681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               1-272
               

               Cow position:
               chrX:15231821-15231558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               1-272
               

               Cow position:
               chrX:34411677-34411948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-272
               

               Cow position:
               chrX:36060988-36061262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 194
               

               Conread position:
               1-272
               

               Cow position:
               chrX:36067856-36068117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-272
               

               Cow position:
               chrX:38549285-38549549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               1-272
               

               Cow position:
               chrX:40557839-40557577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               158, 19
               

               Conread position:
               1-272
               

               Cow position:
               chrX:42381263-42381010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               1-272
               

               Cow position:
               chrX:45598767-45598503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               1-273
               

               Cow position:
               chrX:45993055-45993333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               1-274
               

               Cow position:
               chrX:22921150-22921425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               1-274
               

               Cow position:
               chrX:23024540-23024814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 103
               

               Conread position:
               1-274
               

               Cow position:
               chrX:47484435-47484160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               54, 180
               

               Conread position:
               1-275
               

               Cow position:
               chrX:841995-842262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               1-275
               

               Cow position:
               chrX:1055553-1055276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 32
               

               Conread position:
               1-275
               

               Cow position:
               chrX:16541841-16541552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               54, 227
               

               Conread position:
               1-275
               

               Cow position:
               chrX:31436319-31436579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-275
               

               Cow position:
               chrX:47186484-47186219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               1-277
               

               Cow position:
               chrX:4633014-4632750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 23
               

               Conread position:
               1-277
               

               Cow position:
               chrX:9635344-9635084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               1-277
               

               Cow position:
               chrX:12309552-12309279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               1-277
               

               Cow position:
               chrX:13868530-13868809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 202
               

               Conread position:
               1-277
               

               Cow position:
               chrX:20697771-20697502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               1-277
               

               Cow position:
               chrX:22821884-22822153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               50, 83
               

               Conread position:
               1-277
               

               Cow position:
               chrX:25035551-25035275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 157
               

               Conread position:
               1-277
               

               Cow position:
               chrX:27442719-27442432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               78, 249
               

               Conread position:
               1-277
               

               Cow position:
               chrX:27446525-27446793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               1-277
               

               Cow position:
               chrX:27509183-27508917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               1-277
               

               Cow position:
               chrX:28013603-28013335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               154, 24
               

               Conread position:
               1-277
               

               Cow position:
               chrX:29545043-29544770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               1-277
               

               Cow position:
               chrX:31489348-31489627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               1-277
               

               Cow position:
               chrX:33466450-33466731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               149, 46
               

               Conread position:
               1-277
               

               Cow position:
               chrX:34238557-34238826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               1-277
               

               Cow position:
               chrX:34754355-34754069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 120
               

               Conread position:
               1-277
               

               Cow position:
               chrX:34792474-34792205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               1-277
               

               Cow position:
               chrX:36283182-36283447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 159
               

               Conread position:
               1-277
               

               Cow position:
               chrX:42011116-42011387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 77
               

               Conread position:
               1-277
               

               Cow position:
               chrX:45430180-45429915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               1-277
               

               Cow position:
               chrX:45845932-45846208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-277
               

               Cow position:
               chrX:46433319-46433598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 167
               

               Conread position:
               1-277
               

               Cow position:
               chrX:47046683-47046407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 162
               

               Conread position:
               1-284
               

               Cow position:
               chrX:37489567-37489833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               1-285
               

               Cow position:
               chrX:7721821-7722103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               1-286
               

               Cow position:
               chrX:878536-878264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               155, 45
               

               Conread position:
               1-286
               

               Cow position:
               chrX:9252341-9252047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               1-286
               

               Cow position:
               chrX:11655925-11656197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               1-286
               

               Cow position:
               chrX:12979994-12979718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               1-286
               

               Cow position:
               chrX:13177628-13177360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               1-286
               

               Cow position:
               chrX:13647947-13647669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               1-286
               

               Cow position:
               chrX:17794822-17795097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               1-286
               

               Cow position:
               chrX:27145460-27145720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-286
               

               Cow position:
               chrX:31260793-31260499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               1-286
               

               Cow position:
               chrX:31311862-31312145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-286
               

               Cow position:
               chrX:33493611-33493892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               1-286
               

               Cow position:
               chrX:33855396-33855104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-286
               

               Cow position:
               chrX:37574693-37574956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-286
               

               Cow position:
               chrX:38006931-38006654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               1-286
               

               Cow position:
               chrX:40035608-40035324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               1-286
               

               Cow position:
               chrX:40269321-40269608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-286
               

               Cow position:
               chrX:42470100-42469825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               1-287
               

               Cow position:
               chrX:26625840-26625554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               1-287
               

               Cow position:
               chrX:31442985-31442712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               45, 103
               

               Conread position:
               1-287
               

               Cow position:
               chrX:41884581-41884295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-287
               

               Cow position:
               chrX:42171463-42171179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-287
               

               Cow position:
               chrX:44396858-44397126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               157, 46
               

               Conread position:
               1-287
               

               Cow position:
               chrX:48195204-48194918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               1-288
               

               Cow position:
               chrX:169689-169428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               279, 33
               

               Conread position:
               1-288
               

               Cow position:
               chrX:917535-917250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               1-288
               

               Cow position:
               chrX:4044014-4043749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1-288
               

               Cow position:
               chrX:6407385-6407661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               1-288
               

               Cow position:
               chrX:6690411-6690142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               1-288
               

               Cow position:
               chrX:7277756-7278029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               1-288
               

               Cow position:
               chrX:7646097-7646369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-288
               

               Cow position:
               chrX:8797084-8797367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               1-288
               

               Cow position:
               chrX:9201383-9201666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-288
               

               Cow position:
               chrX:11073352-11073073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               1-288
               

               Cow position:
               chrX:15147351-15147079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               1-288
               

               Cow position:
               chrX:18515237-18515523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 162
               

               Conread position:
               1-288
               

               Cow position:
               chrX:18695083-18694813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               1-288
               

               Cow position:
               chrX:20151687-20151974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               1-288
               

               Cow position:
               chrX:20340054-20339776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               1-288
               

               Cow position:
               chrX:22387411-22387132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 192
               

               Conread position:
               1-288
               

               Cow position:
               chrX:23091718-23091989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               1-288
               

               Cow position:
               chrX:23341131-23340852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               1-288
               

               Cow position:
               chrX:29120893-29121165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 24
               

               Conread position:
               1-288
               

               Cow position:
               chrX:30543454-30543166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 193
               

               Conread position:
               1-288
               

               Cow position:
               chrX:32820865-32821146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 166
               

               Conread position:
               1-288
               

               Cow position:
               chrX:34376792-34377060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-288
               

               Cow position:
               chrX:34502755-34503038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               1-288
               

               Cow position:
               chrX:37232246-37232525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               1-288
               

               Cow position:
               chrX:37955674-37955965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               1-288
               

               Cow position:
               chrX:41068564-41068843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               1-288
               

               Cow position:
               chrX:43527340-43527626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               1-288
               

               Cow position:
               chrX:43730378-43730106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-288
               

               Cow position:
               chrX:44961584-44961869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 189
               

               Conread position:
               1-288
               

               Cow position:
               chrX:46072984-46072699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               1-288
               

               Cow position:
               chrX:47967436-47967725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 180
               

               Conread position:
               1-289
               

               Cow position:
               chrX:36975786-36976070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               1-290
               

               Cow position:
               chrX:37781281-37780989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               1-290
               

               Cow position:
               chrX:42492678-42492403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 114
               

               Conread position:
               1-291
               

               Cow position:
               chrX:3579781-3580065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 126
               

               Conread position:
               1-291
               

               Cow position:
               chrX:4279278-4278997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               1-291
               

               Cow position:
               chrX:6278669-6278377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 193
               

               Conread position:
               1-291
               

               Cow position:
               chrX:7351132-7351418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               52, 175
               

               Conread position:
               1-291
               

               Cow position:
               chrX:8730916-8731214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 200
               

               Conread position:
               1-291
               

               Cow position:
               chrX:9416856-9416563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               1-291
               

               Cow position:
               chrX:11856265-11856551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               1-291
               

               Cow position:
               chrX:17231571-17231856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               1-291
               

               Cow position:
               chrX:19690054-19690336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               1-291
               

               Cow position:
               chrX:26492839-26493127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               1-291
               

               Cow position:
               chrX:27174832-27175119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               1-291
               

               Cow position:
               chrX:27705426-27705707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               1-291
               

               Cow position:
               chrX:30133492-30133197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               50, 183
               

               Conread position:
               1-291
               

               Cow position:
               chrX:34441615-34441333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               1-291
               

               Cow position:
               chrX:34554565-34554844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               1-291
               

               Cow position:
               chrX:35268724-35268982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-291
               

               Cow position:
               chrX:35885893-35885606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               1-291
               

               Cow position:
               chrX:38963943-38964229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               1-291
               

               Cow position:
               chrX:41790608-41790308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               48, 76
               

               Conread position:
               1-291
               

               Cow position:
               chrX:41879098-41878813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               1-291
               

               Cow position:
               chrX:42247347-42247061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 87
               

               Conread position:
               1-291
               

               Cow position:
               chrX:44657128-44656836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 181
               

               Conread position:
               1-291
               

               Cow position:
               chrX:46532673-46532374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               54, 137
               

               Conread position:
               1-292
               

               Cow position:
               chrX:30263089-30263379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               45, 189
               

               Conread position:
               1-293
               

               Cow position:
               chrX:33000740-33001028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               1-349
               

               Cow position:
               chrX:23666959-23667326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               1-350
               

               Cow position:
               chrX:38936537-38936883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               1-352
               

               Cow position:
               chrX:23497828-23497463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               1-352
               

               Cow position:
               chrX:29876230-29875887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               155, 33
               

               Conread position:
               1-353
               

               Cow position:
               chrX:20752096-20752441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               157, 32
               

               Conread position:
               1-356
               

               Cow position:
               chrX:1514564-1514244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-358
               

               Cow position:
               chrX:10412152-10411780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               1-503
               

               Cow position:
               chrX:25816059-25815579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               159, 32
               

               Conread position:
               2-156
               

               Cow position:
               chrX:12115877-12116038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-157
               

               Cow position:
               chrX:10095864-10096023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 90
               

               Conread position:
               2-159
               

               Cow position:
               chrX:8039665-8039819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               2-162
               

               Cow position:
               chrX:31256705-31256863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               2-163
               

               Cow position:
               chrX:41743750-41743912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               2-167
               

               Cow position:
               chrX:38439312-38439479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               2-181
               

               Cow position:
               chrX:42994450-42994636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               50, 101
               

               Conread position:
               2-184
               

               Cow position:
               chrX:37048742-37048555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               51, 76
               

               Conread position:
               2-193
               

               Cow position:
               chrX:28847041-28846859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               2-213
               

               Cow position:
               chrX:35388068-35387853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               2-246
               

               Cow position:
               chrX:4825990-4825756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               2-262
               

               Cow position:
               chrX:35224136-35224388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               2-263
               

               Cow position:
               chrX:45875239-45875485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               2-266
               

               Cow position:
               chrX:1616210-1615947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               2-266
               

               Cow position:
               chrX:11939089-11938837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               2-267
               

               Cow position:
               chrX:46032884-46032630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 149
               

               Conread position:
               2-275
               

               Cow position:
               chrX:22454252-22453993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               2-277
               

               Cow position:
               chrX:4269229-4268957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               2-277
               

               Cow position:
               chrX:14599367-14599640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               2-281
               

               Cow position:
               chrX:31250227-31250499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-285
               

               Cow position:
               chrX:32623420-32623686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               2-286
               

               Cow position:
               chrX:22074638-22074916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               2-286
               

               Cow position:
               chrX:34532366-34532636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               161, 26
               

               Conread position:
               2-288
               

               Cow position:
               chrX:11082776-11082504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               2-289
               

               Cow position:
               chrX:34543624-34543903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 119
               

               Conread position:
               2-291
               

               Cow position:
               chrX:5872151-5872438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               2-291
               

               Cow position:
               chrX:44192615-44192323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               2-291
               

               Cow position:
               chrX:46587655-46587943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               2-352
               

               Cow position:
               chrX:8925543-8925914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               2-353
               

               Cow position:
               chrX:17662759-17662386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               3-158
               

               Cow position:
               chrX:30922020-30922178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               3-184
               

               Cow position:
               chrX:28157333-28157526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               3-184
               

               Cow position:
               chrX:47757090-47756902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               3-193
               

               Cow position:
               chrX:8899863-8900061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 141
               

               Conread position:
               3-266
               

               Cow position:
               chrX:13382164-13382420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               3-267
               

               Cow position:
               chrX:1503177-1503424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               3-271
               

               Cow position:
               chrX:39558508-39558248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               3-277
               

               Cow position:
               chrX:8917231-8917501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 165
               

               Conread position:
               3-277
               

               Cow position:
               chrX:32309944-32310212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               3-287
               

               Cow position:
               chrX:46722902-46722617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               3-288
               

               Cow position:
               chrX:28134184-28134456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               3-288
               

               Cow position:
               chrX:29601994-29601710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               3-291
               

               Cow position:
               chrX:30963033-30962756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               4-237
               

               Cow position:
               chrX:1810323-1810092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 116
               

               Conread position:
               4-275
               

               Cow position:
               chrX:23563957-23563686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               4-288
               

               Cow position:
               chrX:40567439-40567739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               48, 115
               

               Conread position:
               5-238
               

               Cow position:
               chrX:37540965-37541187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 41
               

               Conread position:
               5-266
               

               Cow position:
               chrX:27680242-27680494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               151, 41
               

               Conread position:
               5-277
               

               Cow position:
               chrX:20887805-20887534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               6-157
               

               Cow position:
               chrX:10373158-10373308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               6-231
               

               Cow position:
               chrX:30162838-30163062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               6-239
               

               Cow position:
               chrX:36778249-36778478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 132
               

               Conread position:
               6-244
               

               Cow position:
               chrX:36355957-36356185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               6-266
               

               Cow position:
               chrX:24132310-24132055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               6-275
               

               Cow position:
               chrX:630469-630205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               6-284
               

               Cow position:
               chrX:21664884-21664607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 69
               

               Conread position:
               6-287
               

               Cow position:
               chrX:45403992-45403708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 192
               

               Conread position:
               7-177
               

               Cow position:
               chrX:36723252-36723077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               7-184
               

               Cow position:
               chrX:31252257-31252443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               48, 72
               

               Conread position:
               7-238
               

               Cow position:
               chrX:11589749-11589519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               7-270
               

               Cow position:
               chrX:10959558-10959295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               7-270
               

               Cow position:
               chrX:15007311-15007049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 168
               

               Conread position:
               7-286
               

               Cow position:
               chrX:8869563-8869286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               7-286
               

               Cow position:
               chrX:27227966-27228242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 169
               

               Conread position:
               8-163
               

               Cow position:
               chrX:41403816-41403978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               8-163
               

               Cow position:
               chrX:41410364-41410526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               8-184
               

               Cow position:
               chrX:28105764-28105944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               8-210
               

               Cow position:
               chrX:10394254-10394049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               8-210
               

               Cow position:
               chrX:48385520-48385308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               8-237
               

               Cow position:
               chrX:35822184-35822412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               8-263
               

               Cow position:
               chrX:11844403-11844148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               8-270
               

               Cow position:
               chrX:5680087-5679831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               199, 17
               

               Conread position:
               8-270
               

               Cow position:
               chrX:47166043-47165786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               8-280
               

               Cow position:
               chrX:40826907-40826641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               9-182
               

               Cow position:
               chrX:35969238-35969062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               114, 41
               

               Conread position:
               10-270
               

               Cow position:
               chrX:21642634-21642382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 88
               

               Conread position:
               10-288
               

               Cow position:
               chrX:37910293-37910563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 64
               

               Conread position:
               11-184
               

               Cow position:
               chrX:41198951-41199132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               11-289
               

               Cow position:
               chrX:15545738-15546001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               12-142
               

               Cow position:
               chrX:25411688-25411819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               12-270
               

               Cow position:
               chrX:12249651-12249916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               34, 63
               

               Conread position:
               12-286
               

               Cow position:
               chrX:20584166-20584444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 69
               

               Conread position:
               13-184
               

               Cow position:
               chrX:4091492-4091666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 141
               

               Conread position:
               13-290
               

               Cow position:
               chrX:39126185-39126445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 9
               

               Conread position:
               15-183
               

               Cow position:
               chrX:47481650-47481825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               15-291
               

               Cow position:
               chrX:29680409-29680140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               16-258
               

               Cow position:
               chrX:12405539-12405293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 175
               

               Conread position:
               16-264
               

               Cow position:
               chrX:39415518-39415276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               16-266
               

               Cow position:
               chrX:37119445-37119689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               16-277
               

               Cow position:
               chrX:5118654-5118391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               16-290
               

               Cow position:
               chrX:27301717-27301996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 196
               

               Conread position:
               20-193
               

               Cow position:
               chrX:28845688-28845867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               20-275
               

               Cow position:
               chrX:27946200-27945949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               20-275
               

               Cow position:
               chrX:34662993-34662741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 131
               

               Conread position:
               20-288
               

               Cow position:
               chrX:41122922-41123177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               23-266
               

               Cow position:
               chrX:7695609-7695845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               23-291
               

               Cow position:
               chrX:28878309-28878053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               24-193
               

               Cow position:
               chrX:29723597-29723774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 169
               

               Conread position:
               24-228
               

               Cow position:
               chrX:18999744-18999953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 170
               

               Conread position:
               24-229
               

               Cow position:
               chrX:32215053-32215262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               24-266
               

               Cow position:
               chrX:11085201-11084968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               24-270
               

               Cow position:
               chrX:47280076-47279832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 60
               

               Conread position:
               24-286
               

               Cow position:
               chrX:34313889-34314140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               24-291
               

               Cow position:
               chrX:20677227-20677487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               25-266
               

               Cow position:
               chrX:11614556-11614789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 150
               

               Conread position:
               25-271
               

               Cow position:
               chrX:27685108-27685350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               27-266
               

               Cow position:
               chrX:21566261-21566503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               29-178
               

               Cow position:
               chrX:32747555-32747703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               123, 7
               

               Conread position:
               34-184
               

               Cow position:
               chrX:47209219-47209372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               34-224
               

               Cow position:
               chrX:29032278-29032470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               34-228
               

               Cow position:
               chrX:27415933-27416124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               34-263
               

               Cow position:
               chrX:15814953-15815177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               34-270
               

               Cow position:
               chrX:18204597-18204363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               34-286
               

               Cow position:
               chrX:616396-616143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               34-286
               

               Cow position:
               chrX:34315396-34315637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               209, 39
               

               Conread position:
               34-288
               

               Cow position:
               chrX:17888546-17888305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               34-288
               

               Cow position:
               chrX:34565149-34565402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               34-290
               

               Cow position:
               chrX:32431493-32431744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               34-291
               

               Cow position:
               chrX:41027023-41027280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               35-220
               

               Cow position:
               chrX:35681209-35681393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               36-290
               

               Cow position:
               chrX:6265724-6265479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               37-286
               

               Cow position:
               chrX:45976789-45977042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 159
               

               Conread position:
               37-288
               

               Cow position:
               chrX:6260284-6260031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 164
               

               Conread position:
               39-291
               

               Cow position:
               chrX:27261063-27261313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               41-277
               

               Cow position:
               chrX:24331655-24331883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               41-288
               

               Cow position:
               chrX:34222586-34222832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 154
               

               Conread position:
               43-269
               

               Cow position:
               chrX:45113495-45113718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               45-272
               

               Cow position:
               chrX:4403196-4403419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               45-272
               

               Cow position:
               chrX:40320287-40320508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               33, 92
               

               Conread position:
               45-277
               

               Cow position:
               chrX:9365793-9365569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               113, 29
               

               Conread position:
               45-284
               

               Cow position:
               chrX:5679684-5679458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               45-286
               

               Cow position:
               chrX:40685449-40685212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               45-288
               

               Cow position:
               chrX:31294675-31294454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               45-288
               

               Cow position:
               chrX:38728619-38728852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               45-291
               

               Cow position:
               chrX:31729325-31729563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               46-263
               

               Cow position:
               chrX:27119582-27119790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               46-286
               

               Cow position:
               chrX:26881685-26881449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               150, 28
               

               Conread position:
               50-196
               

               Cow position:
               chrX:20790808-20790955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               53-254
               

               Cow position:
               chrX:47657274-47657470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 54
               

               Conread position:
               55-156
               

               Cow position:
               chrX:35848453-35848552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               56-233
               

               Cow position:
               chrX:38654537-38654366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               56-254
               

               Cow position:
               chrX:4992123-4991929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               56-263
               

               Cow position:
               chrX:17949597-17949400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               56-272
               

               Cow position:
               chrX:29194127-29194331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               57-234
               

               Cow position:
               chrX:19003194-19003361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               57-287
               

               Cow position:
               chrX:40692857-40692635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               58-233
               

               Cow position:
               chrX:12018185-12018356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               61-263
               

               Cow position:
               chrX:29937985-29938184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               61-266
               

               Cow position:
               chrX:16348672-16348475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 130
               

               Conread position:
               62-292
               

               Cow position:
               chrX:21327802-21328035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               63-262
               

               Cow position:
               chrX:48044614-48044423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               64-284
               

               Cow position:
               chrX:10516157-10516367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               64-291
               

               Cow position:
               chrX:31515070-31515295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 7
               

               Conread position:
               65-277
               

               Cow position:
               chrX:40283027-40283228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               86, 98
               

               Conread position:
               67-268
               

               Cow position:
               chrX:29549644-29549451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               67-277
               

               Cow position:
               chrX:12095870-12095665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 122
               

               Conread position:
               67-291
               

               Cow position:
               chrX:37129172-37129390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               97, 39
               

               Conread position:
               70-258
               

               Cow position:
               chrX:6559539-6559360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               73-249
               

               Cow position:
               chrX:11455137-11454963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               73-352
               

               Cow position:
               chrX:23940119-23939840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               74-217
               

               Cow position:
               chrX:25283104-25282957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               74-258
               

               Cow position:
               chrX:1572227-1572051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               74-267
               

               Cow position:
               chrX:20168468-20168655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               74-272
               

               Cow position:
               chrX:7710628-7710437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               74-286
               

               Cow position:
               chrX:1466071-1466278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               74-286
               

               Cow position:
               chrX:29050157-29050363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               99, 116
               

               Conread position:
               74-288
               

               Cow position:
               chrX:42855365-42855576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               76-193
               

               Cow position:
               chrX:42789533-42789654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 105
               

               Conread position:
               76-288
               

               Cow position:
               chrX:40680523-40680732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               76-291
               

               Cow position:
               chrX:20882025-20881824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               77-266
               

               Cow position:
               chrX:36514981-36514796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               78-270
               

               Cow position:
               chrX:4296905-4296725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               78-288
               

               Cow position:
               chrX:23562549-23562750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               80-290
               

               Cow position:
               chrX:23113194-23113405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               81-289
               

               Cow position:
               chrX:16575040-16575231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               82-291
               

               Cow position:
               chrX:4153117-4152909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               84-275
               

               Cow position:
               chrX:36866091-36866278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               85-288
               

               Cow position:
               chrX:39220001-39220197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               86-288
               

               Cow position:
               chrX:4515606-4515808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 78
               

               Conread position:
               93-275
               

               Cow position:
               chrX:22915107-22914935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               95-241
               

               Cow position:
               chrX:17301378-17301233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               61, 101
               

               Conread position:
               108-288
               

               Cow position:
               chrX:32978133-32977967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               115-350
               

               Cow position:
               chrX:19943286-19943055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 77
               
Show alignments to all cow chromosomes.
Conread position:	1-114
Cow position:	chrX:42855245-42855365 (view UCSC Genome Browser custom track)
Alignm length:	121
Alignm identity:	98
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	50, 0
Conread position:	1-120
Cow position:	chrX:22482852-22482730 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	98
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	45, 75
Conread position:	1-123
Cow position:	chrX:41271371-41271248 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	95
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	45, 0
Conread position:	1-135
Cow position:	chrX:2206707-2206581 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	111
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	30, 0
Conread position:	1-138
Cow position:	chrX:24149476-24149615 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	109
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	52, 24
Conread position:	1-142
Cow position:	chrX:38967487-38967626 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	116
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	59, 30
Conread position:	1-148
Cow position:	chrX:35273189-35273339 (view UCSC Genome Browser custom track)
Alignm length:	153
Alignm identity:	119
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	50, 76
Conread position:	1-149
Cow position:	chrX:48684386-48684239 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	116
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	79, 41
Conread position:	1-153
Cow position:	chrX:47453963-47454119 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	116
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	55, 0
Conread position:	1-156
Cow position:	chrX:42282269-42282420 (view UCSC Genome Browser custom track)
Alignm length:	156
Alignm identity:	117
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	72, 0
Conread position:	1-157
Cow position:	chrX:14924836-14924994 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	122
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	45, 0
Conread position:	1-158
Cow position:	chrX:32020285-32020126 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	127
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	33, 57
Conread position:	1-159
Cow position:	chrX:1505548-1505704 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	122
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	78, 45
Conread position:	1-160
Cow position:	chrX:19019274-19019109 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	136
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	54, 0
Conread position:	1-161
Cow position:	chrX:25238013-25238167 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	124
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	45, 94
Conread position:	1-163
Cow position:	chrX:8991724-8991884 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	123
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	50, 27
Conread position:	1-166
Cow position:	chrX:40183513-40183342 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	131
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	54, 155
Conread position:	1-168
Cow position:	chrX:15485790-15485621 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	127
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	33, 47
Conread position:	1-171
Cow position:	chrX:42339099-42338936 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	136
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	50, 30
Conread position:	1-182
Cow position:	chrX:17497933-17498109 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	149
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	123, 30