Cow genome map
| Conread name: | rsin05_g3.y1 |
| Conread position: | 1-286 |
| Cow position: | chr1:95765698-95765396 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-300 |
| Cow position: | chr1:38712401-38712722 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 1-304 |
| Cow position: | chr1:56644201-56643876 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 1-304 |
| Cow position: | chr1:82370095-82370421 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 1-306 |
| Cow position: | chr1:61221107-61221437 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 1-306 |
| Cow position: | chr1:77657223-77657551 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 1-367 |
| Cow position: | chr1:19517745-19517361 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 1-395 |
| Cow position: | chr1:66363485-66363885 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 1-434 |
| Cow position: | chr1:85142527-85142080 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 131 |
| Conread position: | 1-459 |
| Cow position: | chr1:65145030-65144561 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 73, 40 |
| Conread position: | 1-460 |
| Cow position: | chr1:33537772-33538228 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 1-487 |
| Cow position: | chr1:101130317-101129802 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 200 |
| Conread position: | 1-488 |
| Cow position: | chr1:16973425-16972909 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 1-488 |
| Cow position: | chr1:20522252-20521754 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 1-488 |
| Cow position: | chr1:29915840-29916341 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 153 |
| Conread position: | 1-488 |
| Cow position: | chr1:31190671-31190176 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 1-488 |
| Cow position: | chr1:31399807-31399292 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 1-488 |
| Cow position: | chr1:44136998-44136533 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 1-488 |
| Cow position: | chr1:44164506-44165015 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 340 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 2-290 |
| Cow position: | chr1:22388809-22388503 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 154 |
| Conread position: | 2-451 |
| Cow position: | chr1:90297591-90298059 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 3-306 |
| Cow position: | chr1:33987117-33986797 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 153 |
| Conread position: | 36-466 |
| Cow position: | chr1:28517244-28516811 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 37-447 |
| Cow position: | chr1:47831607-47832020 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 57-461 |
| Cow position: | chr1:40479855-40479452 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 61-466 |
| Cow position: | chr1:84240411-84240799 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 77 |
| Conread position: | 61-470 |
| Cow position: | chr1:88297975-88298382 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 63-351 |
| Cow position: | chr1:18282745-18283044 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 63-467 |
| Cow position: | chr1:82378296-82378696 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 76 |
| Conread position: | 66-289 |
| Cow position: | chr1:102784292-102784514 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 66-305 |
| Cow position: | chr1:51844152-51843908 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 66-306 |
| Cow position: | chr1:75744032-75744277 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 66-481 |
| Cow position: | chr1:56718824-56719241 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 67-297 |
| Cow position: | chr1:89510643-89510414 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 153, 67 |
| Conread position: | 67-304 |
| Cow position: | chr1:50260346-50260109 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 67-367 |
| Cow position: | chr1:60280602-60280904 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 67-448 |
| Cow position: | chr1:50271329-50270940 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 67-466 |
| Cow position: | chr1:51983116-51983491 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 67-475 |
| Cow position: | chr1:31756446-31756850 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 68-396 |
| Cow position: | chr1:30066143-30066481 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 69-292 |
| Cow position: | chr1:66684792-66684563 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-302 |
| Cow position: | chr1:70534455-70534218 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 69-304 |
| Cow position: | chr1:55146053-55146292 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 69-306 |
| Cow position: | chr1:101852826-101852588 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 69-316 |
| Cow position: | chr1:95071219-95071468 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-349 |
| Cow position: | chr1:90621984-90621699 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 69-392 |
| Cow position: | chr1:78184220-78184537 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 69-432 |
| Cow position: | chr1:3739513-3739867 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 69-438 |
| Cow position: | chr1:59019287-59019653 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 69-449 |
| Cow position: | chr1:55163439-55163815 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 69-450 |
| Cow position: | chr1:85865311-85865674 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 73 |
| Conread position: | 69-451 |
| Cow position: | chr1:46821523-46821902 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 69-451 |
| Cow position: | chr1:47653796-47653421 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-454 |
| Cow position: | chr1:57087734-57087349 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 69-454 |
| Cow position: | chr1:99105375-99104989 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-458 |
| Cow position: | chr1:38382367-38381979 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-466 |
| Cow position: | chr1:72462651-72463054 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-470 |
| Cow position: | chr1:76419629-76420032 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 69-470 |
| Cow position: | chr1:77553419-77553015 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-470 |
| Cow position: | chr1:91799471-91799076 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 69-480 |
| Cow position: | chr1:73756605-73757013 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 69-483 |
| Cow position: | chr1:64678222-64678627 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-485 |
| Cow position: | chr1:99628310-99627890 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-488 |
| Cow position: | chr1:3340435-3340868 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 69-488 |
| Cow position: | chr1:15311379-15311802 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-488 |
| Cow position: | chr1:97761131-97761547 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 211 |
| Conread position: | 70-312 |
| Cow position: | chr1:56634386-56634636 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 70-334 |
| Cow position: | chr1:57329603-57329340 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 70-434 |
| Cow position: | chr1:34363440-34363800 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 70-438 |
| Cow position: | chr1:23362132-23362512 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 70-441 |
| Cow position: | chr1:54203989-54204355 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 70-442 |
| Cow position: | chr1:73225483-73225868 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 70-451 |
| Cow position: | chr1:53308882-53308498 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 70-463 |
| Cow position: | chr1:31814940-31815338 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 70-473 |
| Cow position: | chr1:84252057-84251648 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 70-477 |
| Cow position: | chr1:22227376-22227764 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 70-483 |
| Cow position: | chr1:60119938-60120354 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 70-486 |
| Cow position: | chr1:100450677-100450250 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 70-488 |
| Cow position: | chr1:36874532-36874946 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 70-488 |
| Cow position: | chr1:67406157-67406572 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 74-480 |
| Cow position: | chr1:73522623-73522219 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 61 |
| Conread position: | 76-292 |
| Cow position: | chr1:99210007-99209787 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 76-294 |
| Cow position: | chr1:61747638-61747422 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 76-299 |
| Cow position: | chr1:81373925-81373696 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 76-302 |
| Cow position: | chr1:45020987-45020765 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 76-302 |
| Cow position: | chr1:92196755-92196976 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 147, 61 |
| Conread position: | 76-333 |
| Cow position: | chr1:24581162-24581416 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 76-334 |
| Cow position: | chr1:99792310-99792566 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 56 |
| Conread position: | 76-394 |
| Cow position: | chr1:18415030-18414718 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 214, 57 |
| Conread position: | 76-400 |
| Cow position: | chr1:30034072-30034390 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 57 |
| Conread position: | 76-400 |
| Cow position: | chr1:53458226-53458551 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 76-451 |
| Cow position: | chr1:68097374-68096999 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 76-461 |
| Cow position: | chr1:91450033-91450420 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 76-466 |
| Cow position: | chr1:70380633-70380239 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 76-470 |
| Cow position: | chr1:20385104-20384709 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 76-482 |
| Cow position: | chr1:65907725-65907328 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 279 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 76-483 |
| Cow position: | chr1:68854713-68855096 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 76-487 |
| Cow position: | chr1:55357765-55357353 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 76-487 |
| Cow position: | chr1:84812429-84812003 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 76-488 |
| Cow position: | chr1:1981590-1981182 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 76-488 |
| Cow position: | chr1:53397505-53397918 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 61 |
| Conread position: | 76-488 |
| Cow position: | chr1:53424708-53425108 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 91, 59 |
| Conread position: | 76-488 |
| Cow position: | chr1:74821971-74822382 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 56 |
| Conread position: | 78-300 |
| Cow position: | chr1:66145484-66145704 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-320 |
| Cow position: | chr1:23117426-23117186 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 78-414 |
| Cow position: | chr1:3963144-3963477 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 78-415 |
| Cow position: | chr1:38418597-38418935 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 91 |
| Conread position: | 78-451 |
| Cow position: | chr1:17450644-17450271 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-451 |
| Cow position: | chr1:32795963-32796326 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-451 |
| Cow position: | chr1:50687507-50687880 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 78-451 |
| Cow position: | chr1:82482337-82481964 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-455 |
| Cow position: | chr1:63760761-63760383 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 78-460 |
| Cow position: | chr1:32625022-32625403 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 78-465 |
| Cow position: | chr1:53650430-53650800 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 142, 59 |
| Conread position: | 78-466 |
| Cow position: | chr1:21506763-21506370 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 141, 115 |
| Conread position: | 78-466 |
| Cow position: | chr1:71822397-71822009 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 78-476 |
| Cow position: | chr1:56619162-56618759 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 216, 59 |
| Conread position: | 78-479 |
| Cow position: | chr1:37309993-37309593 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 78-488 |
| Cow position: | chr1:26702674-26702274 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 56 |
| Conread position: | 78-488 |
| Cow position: | chr1:34685723-34686123 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 193, 56 |
| Conread position: | 79-295 |
| Cow position: | chr1:52054609-52054831 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 79-306 |
| Cow position: | chr1:60554350-60554119 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 79-451 |
| Cow position: | chr1:53370384-53370761 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 79-466 |
| Cow position: | chr1:2170001-2169610 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 81-326 |
| Cow position: | chr1:76095744-76095992 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 84-400 |
| Cow position: | chr1:58567069-58566759 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 156, 53 |
| Conread position: | 87-488 |
| Cow position: | chr1:41004833-41004430 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 50 |
| Conread position: | 170-488 |
| Cow position: | chr1:19465677-19465989 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 124, 58 |
| Conread position: | 212-434 |
| Cow position: | chr1:52693673-52693455 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 301-478 |
| Cow position: | chr1:33986772-33986593 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 107 |
| Conread position: | 340-477 |
| Cow position: | chr1:76699735-76699597 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 35 |
Show alignments to all cow chromosomes.