Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-286
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 57, 29

Conread position: 1-300
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 120

Conread position: 1-304
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 17

Conread position: 1-304
Cow position:
Alignm length: 335
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 136

Conread position: 1-306
Cow position:
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 12

Conread position: 1-306
Cow position:
Alignm length: 337
Alignm identity: 234
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 1-367
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 153

Conread position: 1-395
Cow position:
Alignm length: 420
Alignm identity: 282
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 148

Conread position: 1-434
Cow position:
Alignm length: 463
Alignm identity: 312
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 131

Conread position: 1-459
Cow position:
Alignm length: 482
Alignm identity: 321
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 40

Conread position: 1-460
Cow position:
Alignm length: 482
Alignm identity: 324
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 63, 27

Conread position: 1-487
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 200

Conread position: 1-488
Cow position:
Alignm length: 527
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 154

Conread position: 1-488
Cow position:
Alignm length: 514
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 1-488
Cow position:
Alignm length: 522
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 153

Conread position: 1-488
Cow position:
Alignm length: 512
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 115

Conread position: 1-488
Cow position:
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 66

Conread position: 1-488
Cow position:
Alignm length: 501
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-488
Cow position:
Alignm length: 518
Alignm identity: 340
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 152

Conread position: 2-290
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 154

Conread position: 2-451
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 16

Conread position: 3-306
Cow position:
Alignm length: 330
Alignm identity: 231
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 153

Conread position: 36-466
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 111

Conread position: 37-447
Cow position:
Alignm length: 424
Alignm identity: 272
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 98

Conread position: 57-461
Cow position:
Alignm length: 412
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 81

Conread position: 61-466
Cow position:
Alignm length: 416
Alignm identity: 288
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 77

Conread position: 61-470
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 63-351
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 74

Conread position: 63-467
Cow position:
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 76

Conread position: 66-289
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 36

Conread position: 66-305
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 33

Conread position: 66-306
Cow position:
Alignm length: 250
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 76

Conread position: 66-481
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 67-297
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 67

Conread position: 67-304
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 68

Conread position: 67-367
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 100, 70

Conread position: 67-448
Cow position:
Alignm length: 402
Alignm identity: 266
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 68

Conread position: 67-466
Cow position:
Alignm length: 402
Alignm identity: 275
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 54

Conread position: 67-475
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 100, 67

Conread position: 68-396
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 36

Conread position: 69-292
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 34

Conread position: 69-302
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 67

Conread position: 69-304
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 65

Conread position: 69-306
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 67

Conread position: 69-316
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 69

Conread position: 69-349
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 33

Conread position: 69-392
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 33

Conread position: 69-432
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 70

Conread position: 69-438
Cow position:
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 69

Conread position: 69-449
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 62

Conread position: 69-450
Cow position:
Alignm length: 386
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 73

Conread position: 69-451
Cow position:
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-451
Cow position:
Alignm length: 390
Alignm identity: 255
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 34

Conread position: 69-454
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 66

Conread position: 69-454
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 69

Conread position: 69-458
Cow position:
Alignm length: 400
Alignm identity: 271
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 8, 69

Conread position: 69-466
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-470
Cow position:
Alignm length: 409
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 58

Conread position: 69-470
Cow position:
Alignm length: 410
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 69

Conread position: 69-470
Cow position:
Alignm length: 408
Alignm identity: 274
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 41, 33

Conread position: 69-480
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 53

Conread position: 69-483
Cow position:
Alignm length: 423
Alignm identity: 286
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 8, 69

Conread position: 69-485
Cow position:
Alignm length: 433
Alignm identity: 296
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 439
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 74

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 281
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 211

Conread position: 70-312
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 41

Conread position: 70-334
Cow position:
Alignm length: 271
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 67

Conread position: 70-434
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 63

Conread position: 70-438
Cow position:
Alignm length: 385
Alignm identity: 253
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 62

Conread position: 70-441
Cow position:
Alignm length: 384
Alignm identity: 245
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 60

Conread position: 70-442
Cow position:
Alignm length: 389
Alignm identity: 247
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 80, 63

Conread position: 70-451
Cow position:
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 62

Conread position: 70-463
Cow position:
Alignm length: 408
Alignm identity: 276
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 18

Conread position: 70-473
Cow position:
Alignm length: 416
Alignm identity: 264
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 17

Conread position: 70-477
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 31

Conread position: 70-483
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 68

Conread position: 70-486
Cow position:
Alignm length: 438
Alignm identity: 287
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 71

Conread position: 70-488
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 66

Conread position: 70-488
Cow position:
Alignm length: 433
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 74-480
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 61

Conread position: 76-292
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 59

Conread position: 76-294
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 59

Conread position: 76-299
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 59

Conread position: 76-302
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 26

Conread position: 76-302
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 147, 61

Conread position: 76-333
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 111, 61

Conread position: 76-334
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 56

Conread position: 76-394
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 214, 57

Conread position: 76-400
Cow position:
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 57

Conread position: 76-400
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 34, 66

Conread position: 76-451
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 25

Conread position: 76-461
Cow position:
Alignm length: 402
Alignm identity: 274
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 59

Conread position: 76-466
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 123, 64

Conread position: 76-470
Cow position:
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 61

Conread position: 76-482
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 26

Conread position: 76-483
Cow position:
Alignm length: 414
Alignm identity: 280
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 24

Conread position: 76-487
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 59

Conread position: 76-487
Cow position:
Alignm length: 431
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 59

Conread position: 76-488
Cow position:
Alignm length: 422
Alignm identity: 278
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 129, 61

Conread position: 76-488
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 61

Conread position: 76-488
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 59

Conread position: 76-488
Cow position:
Alignm length: 419
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 56

Conread position: 78-300
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 24

Conread position: 78-320
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 28

Conread position: 78-414
Cow position:
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 78-415
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 91

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 379
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-455
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-460
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 89, 57

Conread position: 78-465
Cow position:
Alignm length: 392
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 142, 59

Conread position: 78-466
Cow position:
Alignm length: 402
Alignm identity: 262
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 115

Conread position: 78-466
Cow position:
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 78-476
Cow position:
Alignm length: 419
Alignm identity: 280
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 216, 59

Conread position: 78-479
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 59

Conread position: 78-488
Cow position:
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 56

Conread position: 78-488
Cow position:
Alignm length: 413
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 193, 56

Conread position: 79-295
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 56

Conread position: 79-306
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 56

Conread position: 79-451
Cow position:
Alignm length: 387
Alignm identity: 249
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 58

Conread position: 79-466
Cow position:
Alignm length: 400
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 108, 53

Conread position: 81-326
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 53

Conread position: 84-400
Cow position:
Alignm length: 323
Alignm identity: 211
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 156, 53

Conread position: 87-488
Cow position:
Alignm length: 411
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 50

Conread position: 170-488
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 58

Conread position: 212-434
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 54

Conread position: 301-478
Cow position:
Alignm length: 182
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 107

Conread position: 340-477
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 35

Show alignments to all cow chromosomes.