Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-287
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 155

Conread position: 1-291
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 116

Conread position: 1-292
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 153

Conread position: 1-314
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 1-351
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 156

Conread position: 1-351
Cow position:
Alignm length: 384
Alignm identity: 264
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 155

Conread position: 1-359
Cow position:
Alignm length: 402
Alignm identity: 284
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 31, 290

Conread position: 1-383
Cow position:
Alignm length: 418
Alignm identity: 278
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 172

Conread position: 1-400
Cow position:
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 148

Conread position: 1-413
Cow position:
Alignm length: 433
Alignm identity: 286
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 144

Conread position: 1-432
Cow position:
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 1-451
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 57

Conread position: 1-458
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 1-466
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 1-466
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 1-483
Cow position:
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 100

Conread position: 1-485
Cow position:
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 155

Conread position: 1-488
Cow position:
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 1-488
Cow position:
Alignm length: 533
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 117

Conread position: 1-488
Cow position:
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 155

Conread position: 1-488
Cow position:
Alignm length: 531
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 1-488
Cow position:
Alignm length: 528
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 148

Conread position: 3-284
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 114

Conread position: 8-267
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 33

Conread position: 60-288
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 76

Conread position: 60-328
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 17, 76

Conread position: 60-451
Cow position:
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 60-470
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 42

Conread position: 61-295
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 77

Conread position: 61-305
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 81

Conread position: 61-341
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 42

Conread position: 61-458
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 61-465
Cow position:
Alignm length: 427
Alignm identity: 278
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 43

Conread position: 61-488
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 77

Conread position: 64-300
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 123

Conread position: 66-295
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 79

Conread position: 67-340
Cow position:
Alignm length: 278
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 98

Conread position: 67-433
Cow position:
Alignm length: 380
Alignm identity: 247
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 54

Conread position: 69-283
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 33

Conread position: 69-292
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 34

Conread position: 69-316
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 67

Conread position: 69-320
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 69

Conread position: 69-449
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 65

Conread position: 69-451
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 69-451
Cow position:
Alignm length: 389
Alignm identity: 265
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 69

Conread position: 69-451
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 8, 34

Conread position: 69-454
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-458
Cow position:
Alignm length: 406
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 308

Conread position: 69-459
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 8, 67

Conread position: 69-459
Cow position:
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 69-466
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-467
Cow position:
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 174

Conread position: 69-470
Cow position:
Alignm length: 409
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-470
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-470
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 38

Conread position: 69-470
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-477
Cow position:
Alignm length: 413
Alignm identity: 275
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 8, 64

Conread position: 69-487
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 126

Conread position: 69-488
Cow position:
Alignm length: 453
Alignm identity: 310
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 41

Conread position: 69-488
Cow position:
Alignm length: 441
Alignm identity: 308
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 428
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 69-488
Cow position:
Alignm length: 434
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 64

Conread position: 69-488
Cow position:
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 436
Alignm identity: 299
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 53

Conread position: 70-316
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 32

Conread position: 70-367
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 65

Conread position: 70-393
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 67

Conread position: 70-400
Cow position:
Alignm length: 341
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 68

Conread position: 70-417
Cow position:
Alignm length: 361
Alignm identity: 231
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 67

Conread position: 70-446
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 119, 65

Conread position: 70-458
Cow position:
Alignm length: 399
Alignm identity: 264
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 83

Conread position: 76-305
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 56

Conread position: 76-314
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 59

Conread position: 76-466
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 76-466
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 76-470
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 62

Conread position: 76-488
Cow position:
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 76-488
Cow position:
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 76-488
Cow position:
Alignm length: 422
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 144, 61

Conread position: 76-488
Cow position:
Alignm length: 450
Alignm identity: 295
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 62

Conread position: 76-488
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 77-306
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 78-257
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 12

Conread position: 78-304
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 142, 24

Conread position: 78-305
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 23

Conread position: 78-310
Cow position:
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 59

Conread position: 78-395
Cow position:
Alignm length: 323
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 43

Conread position: 78-434
Cow position:
Alignm length: 369
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 57

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 382
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 78-451
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 109, 52

Conread position: 78-455
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 59

Conread position: 78-466
Cow position:
Alignm length: 397
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 24

Conread position: 78-487
Cow position:
Alignm length: 430
Alignm identity: 281
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 90, 57

Conread position: 78-488
Cow position:
Alignm length: 426
Alignm identity: 297
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 85, 55

Conread position: 79-448
Cow position:
Alignm length: 375
Alignm identity: 249
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 23

Conread position: 79-451
Cow position:
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 79-457
Cow position:
Alignm length: 402
Alignm identity: 258
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 56

Conread position: 79-488
Cow position:
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 79-488
Cow position:
Alignm length: 418
Alignm identity: 282
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 59

Conread position: 79-488
Cow position:
Alignm length: 418
Alignm identity: 278
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 56

Conread position: 84-434
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 85, 51

Conread position: 84-454
Cow position:
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 53

Conread position: 87-488
Cow position:
Alignm length: 416
Alignm identity: 287
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 48

Conread position: 88-306
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 90-433
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 47

Conread position: 136-293
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 150-482
Cow position:
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 134

Conread position: 169-487
Cow position:
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 234

Conread position: 178-376
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 81

Conread position: 209-488
Cow position:
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 227

Conread position: 308-488
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 41

Conread position: 327-485
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 26

Show alignments to all cow chromosomes.