Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 154
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 154
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               20, 154
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               1-482
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               37-303
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               39-488
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               43-482
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               45-439
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               55-303
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 109
               

               Conread position:
               55-451
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               57-419
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               61-304
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               61-316
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               61-486
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               66-288
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               67-431
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               67-448
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               67-458
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               132, 70
               

               Conread position:
               68-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 69
               

               Conread position:
               69-283
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-319
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-359
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-380
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 71
               

               Conread position:
               69-434
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-455
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               69-472
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-481
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               70-318
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               70-404
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 68
               

               Conread position:
               70-423
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               70-426
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 70
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               70-439
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               70-483
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               71-300
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 92
               

               Conread position:
               76-306
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-460
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 59
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               76-487
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               285
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               77-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               78-283
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               78-298
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 59
               

               Conread position:
               78-304
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 57
               

               Conread position:
               78-350
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               78-424
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-444
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               145, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-461
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-478
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               79-265
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               79-419
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               82-480
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               83-445
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               85-487
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               111-342
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               140-488
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               170-485
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               186-488
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               84, 79
               

               Conread position:
               192-481
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               308-477
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               308-488
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 0
               
Show alignments to all cow chromosomes.