Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 154
               

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 122
               

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               3-451
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 118
               

               Conread position:
               3-466
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               4-477
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 153
               

               Conread position:
               61-299
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               61-451
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               61-469
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               278
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               63-441
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               7, 76
               

               Conread position:
               64-484
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               66-314
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               66-424
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               66-488
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               67-334
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               78, 54
               

               Conread position:
               67-458
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               67-470
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               67-486
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 70
               

               Conread position:
               69-268
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               69-303
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-313
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               118, 68
               

               Conread position:
               69-314
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               69-434
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-477
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-481
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-484
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 68
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               297
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               70-329
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               70-334
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               112, 67
               

               Conread position:
               70-434
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               70-447
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               70-448
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-486
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 67
               

               Conread position:
               70-487
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               71-442
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               72-485
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               76-293
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-304
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               76-434
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               76-475
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-484
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 57
               

               Conread position:
               77-485
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               78-262
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               78-314
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               78-454
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               78-475
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               84, 57
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               79-316
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               79-350
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               79-460
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               79-478
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               79-483
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               283
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               84-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               87-306
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               102-471
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               98, 33
               

               Conread position:
               109-488
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               115-301
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               145-488
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               75, 142
               

               Conread position:
               163-488
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 167
               

               Conread position:
               170-470
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               214-477
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 179
               

               Conread position:
               219-488
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 66
               

               Conread position:
               297-478
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 138
               
Show alignments to all cow chromosomes.