Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-289
Cow position: chr14:24837104-24837416 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 151

Conread position: 1-292
Cow position: chr14:23107984-23107682 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 155

Conread position: 1-306
Cow position: chr14:45238912-45239222 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 147

Conread position: 1-343
Cow position: chr14:28008428-28008075 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 115

Conread position: 1-446
Cow position: chr14:2037330-2037773 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 146

Conread position: 1-451
Cow position: chr14:28256959-28257420 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 300
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 148

Conread position: 1-474
Cow position: chr14:19350953-19350446 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-477
Cow position: chr14:7812950-7813444 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 1-488
Cow position: chr14:8488814-8488296 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 130

Conread position: 1-488
Cow position: chr14:10091180-10090667 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 101

Conread position: 1-488
Cow position: chr14:10907348-10906831 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 120

Conread position: 1-488
Cow position: chr14:19957286-19957792 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-488
Cow position: chr14:20068906-20069400 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 62

Conread position: 42-480
Cow position: chr14:37332095-37331655 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 309
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 28, 62

Conread position: 46-394
Cow position: chr14:46653946-46654287 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 33, 9

Conread position: 62-291
Cow position: chr14:20518373-20518135 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 42

Conread position: 67-425
Cow position: chr14:35062720-35062359 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 31

Conread position: 68-286
Cow position: chr14:23818582-23818805 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 66

Conread position: 69-303
Cow position: chr14:4991798-4991558 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 67

Conread position: 69-308
Cow position: chr14:34984377-34984134 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 8, 69

Conread position: 69-314
Cow position: chr14:49421209-49421452 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 62

Conread position: 69-359
Cow position: chr14:19887521-19887817 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 18

Conread position: 69-404
Cow position: chr14:17756094-17755759 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 69-456
Cow position: chr14:5501615-5502003 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-465
Cow position: chr14:22689488-22689081 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 8, 34

Conread position: 69-465
Cow position: chr14:43561547-43561947 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 67

Conread position: 69-466
Cow position: chr14:38143598-38143969 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 118, 68

Conread position: 69-466
Cow position: chr14:40462108-40461721 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 69

Conread position: 69-470
Cow position: chr14:32583653-32583250 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-482
Cow position: chr14:7960303-7959893 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-482
Cow position: chr14:19189575-19189160 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-485
Cow position: chr14:20746108-20745697 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 67

Conread position: 69-487
Cow position: chr14:42918636-42918206 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position: chr14:8754864-8754444 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position: chr14:12546053-12546470 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 56

Conread position: 70-292
Cow position: chr14:35354841-35354620 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 69

Conread position: 70-314
Cow position: chr14:10743063-10742816 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 59

Conread position: 70-434
Cow position: chr14:1283294-1283665 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 119, 138

Conread position: 70-439
Cow position: chr14:20468688-20469059 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 97, 51

Conread position: 70-453
Cow position: chr14:14589081-14589464 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 92, 65

Conread position: 70-458
Cow position: chr14:32173316-32172923 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 249
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 63

Conread position: 70-488
Cow position: chr14:12483782-12484184 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 290
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 150, 48

Conread position: 76-342
Cow position: chr14:36880275-36880001 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 26

Conread position: 76-445
Cow position: chr14:43261766-43262140 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 64

Conread position: 76-447
Cow position: chr14:22982416-22982042 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 43

Conread position: 76-459
Cow position: chr14:14420016-14419633 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 59

Conread position: 76-460
Cow position: chr14:39562419-39562806 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 61

Conread position: 76-477
Cow position: chr14:22047185-22046802 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 34, 26

Conread position: 76-482
Cow position: chr14:25886030-25885627 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 277
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 42, 11

Conread position: 76-487
Cow position: chr14:39821700-39821278 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 54

Conread position: 76-488
Cow position: chr14:20600915-20600501 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 76-488
Cow position: chr14:34199306-34199733 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 76-488
Cow position: chr14:36776132-36775727 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 102, 61

Conread position: 77-456
Cow position: chr14:42823074-42823472 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 92, 182

Conread position: 78-314
Cow position: chr14:39937519-39937755 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 24

Conread position: 78-316
Cow position: chr14:34370900-34371138 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 28

Conread position: 78-342
Cow position: chr14:18526943-18526681 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 23

Conread position: 78-392
Cow position: chr14:33834619-33834307 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 24

Conread position: 78-396
Cow position: chr14:38811887-38811566 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 103

Conread position: 78-451
Cow position: chr14:10710918-10711291 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position: chr14:14082292-14081919 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position: chr14:28988217-28987849 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 59

Conread position: 78-451
Cow position: chr14:34168690-34169059 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 24

Conread position: 78-455
Cow position: chr14:12834230-12834607 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 59

Conread position: 78-470
Cow position: chr14:24894284-24893894 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 78-484
Cow position: chr14:24896062-24896468 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 79-372
Cow position: chr14:33337660-33337963 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 22

Conread position: 79-482
Cow position: chr14:41749247-41749633 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 395, 58

Conread position: 79-484
Cow position: chr14:35188160-35187759 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 261
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 88, 54

Conread position: 82-450
Cow position: chr14:28708550-28708185 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 18

Conread position: 87-293
Cow position: chr14:38055771-38055567 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 48

Conread position: 87-438
Cow position: chr14:30760726-30760375 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 50

Conread position: 87-457
Cow position: chr14:45583686-45584049 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 48

Conread position: 87-486
Cow position: chr14:27848717-27848316 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 50

Conread position: 140-485
Cow position: chr14:22909279-22909642 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 170-488
Cow position: chr14:19222320-19221997 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 166

Conread position: 174-446
Cow position: chr14:14605483-14605749 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 104

Conread position: 181-481
Cow position: chr14:22989462-22989159 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 230

Show alignments to all cow chromosomes.