Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 148
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 136
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 130
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               42-480
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               46-394
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               62-291
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               67-425
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               68-286
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               95, 66
               

               Conread position:
               69-303
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-308
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-314
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               69-359
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               69-404
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               69-456
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-465
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-465
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 68
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               278
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-482
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-482
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               70-292
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               70-314
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               70-434
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               119, 138
               

               Conread position:
               70-439
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               92, 65
               

               Conread position:
               70-458
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               150, 48
               

               Conread position:
               76-342
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-445
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               76-447
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 43
               

               Conread position:
               76-459
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               76-460
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 61
               

               Conread position:
               76-477
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-482
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               76-487
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 50
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               77-456
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               92, 182
               

               Conread position:
               78-314
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-316
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               78-342
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-392
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-396
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 103
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-455
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-484
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               79-372
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               79-482
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               395, 58
               

               Conread position:
               79-484
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               82-450
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               87-293
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               87-438
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               87-457
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 48
               

               Conread position:
               87-486
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               140-485
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               170-488
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 166
               

               Conread position:
               174-446
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 104
               

               Conread position:
               181-481
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 230
               
Show alignments to all cow chromosomes.