Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 117
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               31, 124
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 23
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               5-479
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               37-293
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               190, 8
               

               Conread position:
               54-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               55-321
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               55-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 81
               

               Conread position:
               57-487
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               60-289
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               61-400
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               63-484
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               66-311
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               66-482
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               67-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               67-451
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 40
               

               Conread position:
               67-453
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               102, 70
               

               Conread position:
               68-306
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               69-292
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               69-295
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-296
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               69-300
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-324
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-350
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-389
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-441
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               8, 204
               

               Conread position:
               69-450
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               69-450
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               69-450
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-477
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-480
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               70-432
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-434
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               102, 65
               

               Conread position:
               70-458
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               76-296
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-318
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               76-334
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               76-345
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               104, 56
               

               Conread position:
               76-352
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               76-442
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               76-457
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               76-458
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 56
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               77-476
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               77-486
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               77-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               105, 60
               

               Conread position:
               78-321
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               78-328
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               78-329
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               135, 59
               

               Conread position:
               78-426
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               254
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               78-441
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-445
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-454
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               78-465
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-486
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               79-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 23
               

               Conread position:
               81-418
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               81-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               86-306
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               87-488
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               87-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               89-437
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               186-294
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-488
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 171
               

               Conread position:
               266-478
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               33, 139
               

               Conread position:
               310-485
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 90
               
Show alignments to all cow chromosomes.