Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               25, 116
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 152
               

               Conread position:
               1-458
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               2-274
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 144
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 152
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 113
               

               Conread position:
               12-451
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               16-283
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               48-466
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 17
               

               Conread position:
               57-432
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               58-254
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               58-487
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               60-447
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               60-458
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               61-380
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               61-451
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               159, 76
               

               Conread position:
               63-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               65-477
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               66-434
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               67-445
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               67-451
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               67-460
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               96, 51
               

               Conread position:
               67-470
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               69-296
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               69-303
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-312
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-323
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-348
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               69-404
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-444
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-477
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               283
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               70-293
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 99
               

               Conread position:
               70-301
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               70-336
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               99, 63
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               70-439
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               70-442
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               70-442
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               70-447
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               70-462
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               70-473
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               76-314
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-326
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-331
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               76-340
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               123, 64
               

               Conread position:
               76-404
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               76-458
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 59
               

               Conread position:
               76-458
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               76-459
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               76-464
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 57
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 59
               

               Conread position:
               77-356
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               77-451
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               78-293
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               78-297
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               78-454
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-460
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 56
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               389, 54
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               145, 56
               

               Conread position:
               170-451
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               179-481
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               308-487
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               149, 23
               
Show alignments to all cow chromosomes.