Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 300
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 157
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 127
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 148
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               14-481
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               16-453
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               61-450
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               61-458
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               62-488
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 77
               

               Conread position:
               63-309
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               7, 76
               

               Conread position:
               63-488
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               64-292
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               66-314
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               67-481
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 70
               

               Conread position:
               67-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               69-282
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               69-284
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-294
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               69-351
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-408
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               69-439
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               69-447
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               69-481
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 118
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               70-459
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               70-469
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               76-294
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               76-296
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               76-303
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               76-347
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               278
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-477
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-487
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               77-401
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 60
               

               Conread position:
               78-437
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               78-456
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               78-458
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               78-466
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               121, 63
               

               Conread position:
               79-399
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 56
               

               Conread position:
               79-447
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               79-451
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               79-466
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               80-450
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 52
               

               Conread position:
               82-427
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               87-488
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 50
               

               Conread position:
               89-303
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 48
               

               Conread position:
               91-470
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 50
               

               Conread position:
               94-488
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               192-394
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               297-485
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               181, 99
               
Show alignments to all cow chromosomes.