Cow genome map
Conread name: | rsin05_g3.y1 |
Conread position: | 1-278 |
Cow position: | chr18:28793694-28793389 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 216 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 31, 139 |
Conread position: | 1-345 |
Cow position: | chr18:10100841-10101215 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 258 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 33, 154 |
Conread position: | 1-357 |
Cow position: | chr18:50789465-50789825 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 23, 32 |
Conread position: | 1-368 |
Cow position: | chr18:54274649-54275037 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 264 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 31, 118 |
Conread position: | 1-466 |
Cow position: | chr18:15485213-15484721 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 334 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 31, 118 |
Conread position: | 1-487 |
Cow position: | chr18:25003479-25002987 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 97 |
Conread position: | 1-488 |
Cow position: | chr18:12118456-12117948 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 120 |
Conread position: | 1-488 |
Cow position: | chr18:43464035-43463515 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 151 |
Conread position: | 4-485 |
Cow position: | chr18:32860037-32860530 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 113 |
Conread position: | 35-427 |
Cow position: | chr18:20226709-20226311 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 25 |
Conread position: | 60-488 |
Cow position: | chr18:33274759-33275205 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 78 |
Conread position: | 61-296 |
Cow position: | chr18:1144747-1144512 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 169 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 17, 73 |
Conread position: | 62-283 |
Cow position: | chr18:48548624-48548842 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 66-451 |
Cow position: | chr18:23619090-23619486 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 265 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 11, 70 |
Conread position: | 66-487 |
Cow position: | chr18:50082756-50082359 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 44 |
Conread position: | 67-434 |
Cow position: | chr18:17454196-17453842 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 243 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 132, 70 |
Conread position: | 67-466 |
Cow position: | chr18:55119343-55119749 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 96 |
Conread position: | 68-352 |
Cow position: | chr18:33609709-33609989 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 194 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 99, 69 |
Conread position: | 69-304 |
Cow position: | chr18:33158343-33158584 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 69-306 |
Cow position: | chr18:36649196-36649438 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 69-314 |
Cow position: | chr18:28292285-28292039 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 8, 34 |
Conread position: | 69-315 |
Cow position: | chr18:1955050-1954804 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 8, 34 |
Conread position: | 69-315 |
Cow position: | chr18:33157264-33157503 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-316 |
Cow position: | chr18:249411-249149 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 177 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 69-326 |
Cow position: | chr18:31563124-31562861 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 187 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-333 |
Cow position: | chr18:6829590-6829324 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 200 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-350 |
Cow position: | chr18:48451148-48451432 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 8, 58 |
Conread position: | 69-398 |
Cow position: | chr18:43950314-43950646 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-451 |
Cow position: | chr18:10107167-10107539 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 263 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 47, 67 |
Conread position: | 69-451 |
Cow position: | chr18:22275568-22275183 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 264 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-453 |
Cow position: | chr18:38090111-38089707 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 282 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-458 |
Cow position: | chr18:42966312-42966716 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-459 |
Cow position: | chr18:54031178-54031570 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-470 |
Cow position: | chr18:19159487-19159099 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 69-485 |
Cow position: | chr18:9089186-9089590 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 281 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 69-488 |
Cow position: | chr18:13173052-13172622 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-488 |
Cow position: | chr18:28658434-28658015 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 281 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 8, 66 |
Conread position: | 69-488 |
Cow position: | chr18:37002109-37002527 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 69-488 |
Cow position: | chr18:44262089-44262520 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 70-287 |
Cow position: | chr18:6742257-6742037 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 152 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 71, 95 |
Conread position: | 70-344 |
Cow position: | chr18:37861966-37861677 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 189 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 70-360 |
Cow position: | chr18:23079346-23079056 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 197 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 96, 67 |
Conread position: | 70-410 |
Cow position: | chr18:54065258-54064916 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 223 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 7, 68 |
Conread position: | 70-442 |
Cow position: | chr18:40078386-40078019 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 249 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 40, 32 |
Conread position: | 70-451 |
Cow position: | chr18:18056803-18056424 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 262 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 93, 65 |
Conread position: | 70-451 |
Cow position: | chr18:22181631-22181251 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 258 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 36, 32 |
Conread position: | 70-453 |
Cow position: | chr18:14404097-14403713 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 254 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 104, 67 |
Conread position: | 70-453 |
Cow position: | chr18:24712199-24711812 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 265 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 93, 70 |
Conread position: | 75-466 |
Cow position: | chr18:29387718-29388087 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 62 |
Conread position: | 76-301 |
Cow position: | chr18:25206815-25206592 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 148, 61 |
Conread position: | 76-306 |
Cow position: | chr18:11680173-11680401 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 164 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 144, 41 |
Conread position: | 76-322 |
Cow position: | chr18:29759200-29759453 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 177 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 142, 61 |
Conread position: | 76-404 |
Cow position: | chr18:19193863-19193542 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 234 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 33, 26 |
Conread position: | 76-451 |
Cow position: | chr18:10082357-10082724 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 264 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 25, 30 |
Conread position: | 76-454 |
Cow position: | chr18:20125790-20126161 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 255 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 123, 61 |
Conread position: | 76-457 |
Cow position: | chr18:22065885-22065501 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 26 |
Conread position: | 76-457 |
Cow position: | chr18:23631096-23630713 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 59 |
Conread position: | 76-466 |
Cow position: | chr18:29648271-29648653 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 56 |
Conread position: | 76-470 |
Cow position: | chr18:47183808-47183411 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 79 |
Conread position: | 76-472 |
Cow position: | chr18:14815859-14815467 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 26 |
Conread position: | 76-474 |
Cow position: | chr18:45478416-45478801 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 45 |
Conread position: | 76-477 |
Cow position: | chr18:54574836-54574434 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 26 |
Conread position: | 76-481 |
Cow position: | chr18:17341767-17342179 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 272 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 67, 189 |
Conread position: | 76-486 |
Cow position: | chr18:33299390-33299789 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 275 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 42, 62 |
Conread position: | 76-488 |
Cow position: | chr18:11376847-11377258 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 61 |
Conread position: | 76-488 |
Cow position: | chr18:29058998-29058600 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 282 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 313, 36 |
Conread position: | 77-454 |
Cow position: | chr18:7076253-7076625 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 60 |
Conread position: | 78-295 |
Cow position: | chr18:28929614-28929397 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 142, 66 |
Conread position: | 78-296 |
Cow position: | chr18:33883454-33883226 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 78-314 |
Cow position: | chr18:33523063-33523300 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 109, 59 |
Conread position: | 78-405 |
Cow position: | chr18:53829675-53829351 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 231 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 78-417 |
Cow position: | chr18:51191268-51190932 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 237 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 142, 57 |
Conread position: | 78-429 |
Cow position: | chr18:16378454-16378805 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 246 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 100, 59 |
Conread position: | 78-451 |
Cow position: | chr18:11251551-11251178 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 23 |
Conread position: | 78-451 |
Cow position: | chr18:21609333-21608954 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 260 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 78-451 |
Cow position: | chr18:41238356-41238724 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 255 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 109, 59 |
Conread position: | 78-466 |
Cow position: | chr18:45904413-45904026 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 57 |
Conread position: | 78-470 |
Cow position: | chr18:32218769-32218380 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 259 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 142, 59 |
Conread position: | 78-470 |
Cow position: | chr18:35012821-35012436 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 59 |
Conread position: | 78-484 |
Cow position: | chr18:7964715-7965121 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 59 |
Conread position: | 78-487 |
Cow position: | chr18:37334596-37334992 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 285 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 130, 57 |
Conread position: | 78-488 |
Cow position: | chr18:13292993-13293404 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 24 |
Conread position: | 79-294 |
Cow position: | chr18:50092616-50092402 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 144, 62 |
Conread position: | 82-296 |
Cow position: | chr18:23137728-23137511 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 160 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 81, 53 |
Conread position: | 82-459 |
Cow position: | chr18:52595884-52596251 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 20 |
Conread position: | 88-451 |
Cow position: | chr18:49059193-49059550 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 240 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 79, 46 |
Conread position: | 135-488 |
Cow position: | chr18:16418156-16417809 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 152 |
Conread position: | 140-458 |
Cow position: | chr18:52635539-52635225 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 211 |
Conread position: | 181-488 |
Cow position: | chr18:51500494-51500180 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 231 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 20, 12 |
Show alignments to all cow chromosomes.