Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-278
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 139
               

               Conread position:
               1-345
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               334
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 97
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               4-485
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               35-427
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               61-296
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               62-283
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               66-451
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               66-487
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               67-434
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               132, 70
               

               Conread position:
               67-466
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 96
               

               Conread position:
               68-352
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-314
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-315
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-315
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               69-326
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-333
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-350
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               69-398
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               282
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-459
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               70-287
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 95
               

               Conread position:
               70-344
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               70-360
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               70-410
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               70-442
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 32
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               75-466
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 62
               

               Conread position:
               76-301
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 61
               

               Conread position:
               76-306
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               144, 41
               

               Conread position:
               76-322
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               142, 61
               

               Conread position:
               76-404
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               76-454
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-457
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-457
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 59
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 79
               

               Conread position:
               76-472
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               76-474
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 45
               

               Conread position:
               76-477
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-481
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 189
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               313, 36
               

               Conread position:
               77-454
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 60
               

               Conread position:
               78-295
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 66
               

               Conread position:
               78-296
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               78-314
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-405
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-417
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               78-429
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-466
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 57
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-484
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 59
               

               Conread position:
               78-487
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               79-294
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               144, 62
               

               Conread position:
               82-296
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               82-459
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               88-451
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 46
               

               Conread position:
               135-488
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 152
               

               Conread position:
               140-458
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 211
               

               Conread position:
               181-488
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 12
               
Show alignments to all cow chromosomes.