Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-293
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 156

Conread position: 1-295
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 212

Conread position: 1-296
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 31

Conread position: 1-298
Cow position:
Alignm length: 325
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 116

Conread position: 1-304
Cow position:
Alignm length: 322
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 149

Conread position: 1-304
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 158

Conread position: 1-309
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 119

Conread position: 1-316
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 151

Conread position: 1-397
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 154

Conread position: 1-447
Cow position:
Alignm length: 464
Alignm identity: 305
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 5

Conread position: 1-451
Cow position:
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 154

Conread position: 1-485
Cow position:
Alignm length: 516
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 119

Conread position: 1-487
Cow position:
Alignm length: 525
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 116

Conread position: 1-488
Cow position:
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 151

Conread position: 1-488
Cow position:
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 119

Conread position: 2-488
Cow position:
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 116

Conread position: 5-482
Cow position:
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 115

Conread position: 8-290
Cow position:
Alignm length: 302
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 119

Conread position: 13-485
Cow position:
Alignm length: 506
Alignm identity: 326
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 102

Conread position: 15-485
Cow position:
Alignm length: 498
Alignm identity: 338
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 134

Conread position: 56-486
Cow position:
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 79

Conread position: 57-451
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 13, 80

Conread position: 61-293
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 74

Conread position: 61-488
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 62-466
Cow position:
Alignm length: 417
Alignm identity: 284
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 15, 69

Conread position: 63-303
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 72

Conread position: 63-397
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 134

Conread position: 65-330
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 36

Conread position: 66-428
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 121, 71

Conread position: 67-443
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 34

Conread position: 67-451
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 39

Conread position: 67-451
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 70

Conread position: 67-488
Cow position:
Alignm length: 454
Alignm identity: 309
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 70

Conread position: 68-292
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 67

Conread position: 68-379
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 10, 66

Conread position: 68-442
Cow position:
Alignm length: 394
Alignm identity: 255
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 101, 69

Conread position: 69-290
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 69

Conread position: 69-304
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 65

Conread position: 69-304
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 67

Conread position: 69-306
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 72

Conread position: 69-306
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 69

Conread position: 69-314
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 34

Conread position: 69-315
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 33

Conread position: 69-319
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 69

Conread position: 69-334
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 69

Conread position: 69-337
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 69

Conread position: 69-340
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 56

Conread position: 69-351
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 69

Conread position: 69-359
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-448
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-451
Cow position:
Alignm length: 402
Alignm identity: 268
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 8, 34

Conread position: 69-451
Cow position:
Alignm length: 393
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 67

Conread position: 69-470
Cow position:
Alignm length: 414
Alignm identity: 268
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 72

Conread position: 69-476
Cow position:
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 92

Conread position: 69-483
Cow position:
Alignm length: 423
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 34

Conread position: 69-486
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 433
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 69-488
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 434
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 66

Conread position: 69-488
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 38

Conread position: 69-488
Cow position:
Alignm length: 443
Alignm identity: 298
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 8, 67

Conread position: 69-488
Cow position:
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 70-396
Cow position:
Alignm length: 334
Alignm identity: 218
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 68

Conread position: 70-428
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 67

Conread position: 70-449
Cow position:
Alignm length: 391
Alignm identity: 252
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 102, 63

Conread position: 70-459
Cow position:
Alignm length: 397
Alignm identity: 263
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 68

Conread position: 70-466
Cow position:
Alignm length: 412
Alignm identity: 278
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 7, 66

Conread position: 70-470
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 63

Conread position: 70-476
Cow position:
Alignm length: 415
Alignm identity: 282
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 7, 68

Conread position: 75-341
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 60

Conread position: 75-488
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 328

Conread position: 76-252
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 61

Conread position: 76-289
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 25

Conread position: 76-304
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 26

Conread position: 76-304
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 59

Conread position: 76-304
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 24

Conread position: 76-306
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 41

Conread position: 76-373
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 61

Conread position: 76-434
Cow position:
Alignm length: 361
Alignm identity: 230
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 62

Conread position: 76-450
Cow position:
Alignm length: 383
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 144, 62

Conread position: 76-466
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 61

Conread position: 76-470
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 76-475
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 76-477
Cow position:
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 76-482
Cow position:
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 76-482
Cow position:
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 57

Conread position: 76-485
Cow position:
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 61

Conread position: 76-488
Cow position:
Alignm length: 425
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 30

Conread position: 76-488
Cow position:
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 401

Conread position: 76-488
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 76-488
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 57

Conread position: 77-294
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 24

Conread position: 77-447
Cow position:
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 60

Conread position: 78-285
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 59

Conread position: 78-303
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 23

Conread position: 78-304
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 43

Conread position: 78-359
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 59

Conread position: 78-428
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 127, 59

Conread position: 78-451
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-459
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 78-467
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 57

Conread position: 78-470
Cow position:
Alignm length: 397
Alignm identity: 267
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 24

Conread position: 78-484
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 78-486
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 57

Conread position: 78-488
Cow position:
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 79-315
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 58

Conread position: 79-448
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 141, 56

Conread position: 79-470
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 58

Conread position: 84-290
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 53

Conread position: 87-307
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 18

Conread position: 87-448
Cow position:
Alignm length: 366
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 50

Conread position: 111-426
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 24

Conread position: 140-451
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 78, 202

Conread position: 170-488
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 183

Conread position: 192-477
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 148

Show alignments to all cow chromosomes.