Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 149
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               61-393
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               61-482
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               61-486
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               61-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               21, 133
               

               Conread position:
               62-340
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               63-451
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               63-488
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               67-442
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               67-480
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               69-296
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               69-302
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               69-307
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-307
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-349
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-365
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-433
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-449
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 34
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-455
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               102, 73
               

               Conread position:
               70-450
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               129, 65
               

               Conread position:
               73-447
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               108, 64
               

               Conread position:
               76-286
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 59
               

               Conread position:
               76-292
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               144, 59
               

               Conread position:
               76-311
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               76-314
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               76-316
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               76-433
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               126, 59
               

               Conread position:
               76-465
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 109
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 200
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 48
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               219, 61
               

               Conread position:
               77-458
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               78-304
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 57
               

               Conread position:
               78-342
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-347
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               78-453
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               78-454
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               145, 59
               

               Conread position:
               78-456
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               109, 55
               

               Conread position:
               78-458
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               79-466
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               80-451
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 57
               

               Conread position:
               81-382
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               83-455
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               85-439
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               87, 80
               

               Conread position:
               87-314
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               87-315
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               94-416
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               102-488
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 35
               

               Conread position:
               115-487
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               128-488
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               99, 159
               

               Conread position:
               170-485
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               170-488
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 124
               

               Conread position:
               179-456
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 197
               

               Conread position:
               298-488
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               299-477
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               34, 54
               
Show alignments to all cow chromosomes.