Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 166
               

               Conread position:
               1-317
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 121
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               297
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               31, 147
               

               Conread position:
               1-451
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 160
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 153
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               3-459
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               3-481
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               4-487
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               24, 143
               

               Conread position:
               14-451
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               57-347
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               57-488
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               13, 236
               

               Conread position:
               62-312
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               63-488
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               66-454
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               67-448
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 87
               

               Conread position:
               67-453
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               68-458
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               69-303
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-402
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-483
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               70-397
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               70-454
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               70-484
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               76-316
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 59
               

               Conread position:
               76-358
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               76-400
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               76-413
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               148, 59
               

               Conread position:
               76-439
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 308
               

               Conread position:
               76-459
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               76-460
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               144, 11
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               73, 87
               

               Conread position:
               76-487
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               105, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               192, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 25
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               77-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 66
               

               Conread position:
               78-291
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               78-300
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-314
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-400
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               78-426
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-448
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               105, 63
               

               Conread position:
               79-435
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               79-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 61
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 56
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               82-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               82-477
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 42
               

               Conread position:
               83-445
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               85-451
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               86-419
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               88-481
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               89-448
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               103-393
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               140-466
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               171-470
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               174-486
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 138
               

               Conread position:
               179-417
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               327-477
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.