Cow genome map
| Conread name: | rsin05_g3.y1 |
| Conread position: | 1-286 |
| Cow position: | chr23:21659393-21659686 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 1-292 |
| Cow position: | chr23:36462897-36462581 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 1-307 |
| Cow position: | chr23:21395176-21394846 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 1-458 |
| Cow position: | chr23:19002652-19002172 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 1-470 |
| Cow position: | chr23:40553507-40553018 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 1-474 |
| Cow position: | chr23:20586298-20585801 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 2-481 |
| Cow position: | chr23:9712180-9711663 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 150 |
| Conread position: | 10-326 |
| Cow position: | chr23:23192802-23192472 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 52-464 |
| Cow position: | chr23:16170181-16170594 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 58-295 |
| Cow position: | chr23:11044679-11044915 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 64-488 |
| Cow position: | chr23:7844791-7845221 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 74 |
| Conread position: | 66-306 |
| Cow position: | chr23:30244196-30244435 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 67-342 |
| Cow position: | chr23:7324258-7324532 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 66 |
| Conread position: | 69-302 |
| Cow position: | chr23:3140340-3140577 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 69-303 |
| Cow position: | chr23:3282877-3282643 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 8, 65 |
| Conread position: | 69-306 |
| Cow position: | chr23:11209504-11209736 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-316 |
| Cow position: | chr23:6245425-6245179 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 69-471 |
| Cow position: | chr23:14566224-14565809 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 69-477 |
| Cow position: | chr23:13519966-13520364 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-486 |
| Cow position: | chr23:416672-417083 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 69-486 |
| Cow position: | chr23:13511245-13511661 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 69-487 |
| Cow position: | chr23:5883023-5883448 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-488 |
| Cow position: | chr23:26318930-26319346 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 70-304 |
| Cow position: | chr23:2033117-2033364 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 70-334 |
| Cow position: | chr23:9609847-9610106 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 70-460 |
| Cow position: | chr23:40825504-40825891 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 70-488 |
| Cow position: | chr23:344666-344246 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 76-450 |
| Cow position: | chr23:1721486-1721098 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 144, 58 |
| Conread position: | 76-458 |
| Cow position: | chr23:22804245-22804618 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 76-466 |
| Cow position: | chr23:1640327-1640718 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 76-482 |
| Cow position: | chr23:18367207-18367616 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 76-488 |
| Cow position: | chr23:2370886-2371301 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 30 |
| Conread position: | 78-302 |
| Cow position: | chr23:8291179-8291411 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 78-404 |
| Cow position: | chr23:1670435-1670759 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 78-451 |
| Cow position: | chr23:9267133-9266760 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-454 |
| Cow position: | chr23:9268107-9268483 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 57 |
| Conread position: | 78-470 |
| Cow position: | chr23:36027522-36027134 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 78-488 |
| Cow position: | chr23:26741933-26741528 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 79-325 |
| Cow position: | chr23:22606079-22605832 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 145-404 |
| Cow position: | chr23:25669485-25669226 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 75, 112 |
| Conread position: | 363-481 |
| Cow position: | chr23:20173007-20173125 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.