Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 98
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 137
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 152
               

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 194
               

               Conread position:
               56-470
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               161, 65
               

               Conread position:
               61-485
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               61-487
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               66-452
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               66-453
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               66-486
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               67-451
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               96, 70
               

               Conread position:
               67-482
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               301
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               68-487
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 39
               

               Conread position:
               69-294
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-301
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-332
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               151, 32
               

               Conread position:
               69-357
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-377
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               69-439
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               260
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-455
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 293
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               69-478
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               8, 187
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               70-302
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               97, 63
               

               Conread position:
               70-453
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 111
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               75-434
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 46
               

               Conread position:
               76-291
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               76-340
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               76-400
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 77
               

               Conread position:
               76-419
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 41
               

               Conread position:
               76-487
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 61
               

               Conread position:
               78-292
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               78-306
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               78-347
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               78-382
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               78-424
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-434
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               78-444
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-448
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-466
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-486
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               79-287
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               141, 15
               

               Conread position:
               79-367
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               141, 55
               

               Conread position:
               79-458
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 56
               

               Conread position:
               79-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               171-456
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               173-348
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               10, 162
               

               Conread position:
               314-477
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               14, 90
               
Show alignments to all cow chromosomes.