Cow genome map
| Conread name: | rsin05_g3.y1 |
| Conread position: | 1-450 |
| Cow position: | chr26:12654552-12655006 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 1-458 |
| Cow position: | chr26:8652153-8651672 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 1-459 |
| Cow position: | chr26:19333857-19333397 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 1-466 |
| Cow position: | chr26:13706548-13706087 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 117 |
| Conread position: | 1-485 |
| Cow position: | chr26:10491202-10491721 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 1-488 |
| Cow position: | chr26:31794216-31794717 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 126 |
| Conread position: | 2-265 |
| Cow position: | chr26:14364592-14364317 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 141 |
| Conread position: | 58-340 |
| Cow position: | chr26:22603776-22604052 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 61-316 |
| Cow position: | chr26:7150941-7150687 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 61-485 |
| Cow position: | chr26:21012870-21013301 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 67-304 |
| Cow position: | chr26:14079971-14080212 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 67-442 |
| Cow position: | chr26:11962848-11963227 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 69-342 |
| Cow position: | chr26:4875373-4875645 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-350 |
| Cow position: | chr26:23315359-23315076 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 76 |
| Conread position: | 69-459 |
| Cow position: | chr26:3755762-3756145 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 69-461 |
| Cow position: | chr26:15214748-15215138 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 69-470 |
| Cow position: | chr26:16796698-16796309 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-474 |
| Cow position: | chr26:11875645-11875252 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 69-477 |
| Cow position: | chr26:6714761-6714365 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 69-488 |
| Cow position: | chr26:9604059-9604502 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 69-488 |
| Cow position: | chr26:14173824-14174246 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 76-383 |
| Cow position: | chr26:26191979-26191672 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 76-448 |
| Cow position: | chr26:8307981-8307612 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 50 |
| Conread position: | 76-451 |
| Cow position: | chr26:32850976-32850602 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 76-462 |
| Cow position: | chr26:30741352-30741734 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 76-488 |
| Cow position: | chr26:9867595-9867174 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 146, 45 |
| Conread position: | 78-286 |
| Cow position: | chr26:15201188-15200983 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 78-334 |
| Cow position: | chr26:19791637-19791380 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 78-451 |
| Cow position: | chr26:2481062-2481435 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 78-477 |
| Cow position: | chr26:14359597-14359189 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 78-488 |
| Cow position: | chr26:9100216-9099821 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 48 |
| Conread position: | 79-296 |
| Cow position: | chr26:22247196-22247417 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 79-451 |
| Cow position: | chr26:30632706-30633070 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 45, 57 |
| Conread position: | 79-481 |
| Cow position: | chr26:13344209-13343800 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 84, 56 |
| Conread position: | 81-484 |
| Cow position: | chr26:6448069-6447662 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 56 |
| Conread position: | 82-453 |
| Cow position: | chr26:9854054-9853707 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 85-442 |
| Cow position: | chr26:32083651-32083279 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 179-351 |
| Cow position: | chr26:17148199-17148369 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 105 |
| Conread position: | 180-451 |
| Cow position: | chr26:9062615-9062346 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 221-476 |
| Cow position: | chr26:4664752-4664502 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 110, 76 |
Show alignments to all cow chromosomes.