Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-348
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               35, 134
               

               Conread position:
               1-420
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               1-447
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               326
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 31
               

               Conread position:
               54-466
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               57-434
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               59-488
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               66-485
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               66-488
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               67-427
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               67-445
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               67-454
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               67-458
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               67-461
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               111, 66
               

               Conread position:
               68-461
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 211
               

               Conread position:
               68-466
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               98, 61
               

               Conread position:
               68-488
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               69-284
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-289
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-290
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               69-293
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-294
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-427
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-458
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-483
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               289
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 68
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               70-311
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               149, 18
               

               Conread position:
               70-314
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               70-348
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               149, 56
               

               Conread position:
               70-434
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               105, 65
               

               Conread position:
               70-455
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               95, 63
               

               Conread position:
               70-468
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               75-307
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               76-290
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               76-349
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               49, 44
               

               Conread position:
               76-359
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               76-459
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 57
               

               Conread position:
               76-460
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               285
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               146, 57
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               152, 59
               

               Conread position:
               77-304
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               77-398
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               77-488
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               78-303
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               78-468
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               80-454
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               87-450
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               179-290
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               222-488
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 9
               
Show alignments to all cow chromosomes.