Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-301
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 31

Conread position: 1-306
Cow position:
Alignm length: 332
Alignm identity: 238
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 158

Conread position: 1-331
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 108

Conread position: 1-400
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 63

Conread position: 1-443
Cow position:
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 12

Conread position: 1-451
Cow position:
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 64

Conread position: 1-457
Cow position:
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 1-457
Cow position:
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 153

Conread position: 1-479
Cow position:
Alignm length: 504
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 119

Conread position: 1-488
Cow position:
Alignm length: 524
Alignm identity: 353
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 121

Conread position: 2-477
Cow position:
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 146

Conread position: 3-311
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 118

Conread position: 3-466
Cow position:
Alignm length: 491
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 148

Conread position: 4-450
Cow position:
Alignm length: 466
Alignm identity: 296
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 15

Conread position: 5-488
Cow position:
Alignm length: 525
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 116

Conread position: 8-424
Cow position:
Alignm length: 436
Alignm identity: 294
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 107

Conread position: 46-488
Cow position:
Alignm length: 467
Alignm identity: 296
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 93

Conread position: 58-486
Cow position:
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 63-442
Cow position:
Alignm length: 398
Alignm identity: 262
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 72

Conread position: 64-332
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 39

Conread position: 64-488
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 81

Conread position: 66-450
Cow position:
Alignm length: 398
Alignm identity: 258
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 68

Conread position: 66-488
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 73

Conread position: 67-294
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 152, 70

Conread position: 67-466
Cow position:
Alignm length: 407
Alignm identity: 266
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 70

Conread position: 67-466
Cow position:
Alignm length: 426
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 68-316
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 22

Conread position: 68-488
Cow position:
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 69-286
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 34

Conread position: 69-288
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 67

Conread position: 69-290
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 69

Conread position: 69-304
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 70

Conread position: 69-311
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 69

Conread position: 69-316
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 13

Conread position: 69-317
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 69

Conread position: 69-349
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 8, 65

Conread position: 69-400
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 65

Conread position: 69-418
Cow position:
Alignm length: 356
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 8, 69

Conread position: 69-443
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-446
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 69-447
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 8, 67

Conread position: 69-448
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 69

Conread position: 69-448
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 69

Conread position: 69-451
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-458
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 56

Conread position: 69-461
Cow position:
Alignm length: 409
Alignm identity: 279
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 227

Conread position: 69-465
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 70

Conread position: 69-466
Cow position:
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-466
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 69-470
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 69-470
Cow position:
Alignm length: 408
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-478
Cow position:
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 65

Conread position: 69-488
Cow position:
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 126

Conread position: 69-488
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 448
Alignm identity: 306
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position:
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 65

Conread position: 70-385
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 32

Conread position: 70-400
Cow position:
Alignm length: 337
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 42

Conread position: 70-439
Cow position:
Alignm length: 374
Alignm identity: 239
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 90, 70

Conread position: 70-439
Cow position:
Alignm length: 376
Alignm identity: 251
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 90, 73

Conread position: 70-439
Cow position:
Alignm length: 377
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 54

Conread position: 70-450
Cow position:
Alignm length: 396
Alignm identity: 251
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 65

Conread position: 70-451
Cow position:
Alignm length: 392
Alignm identity: 260
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 65

Conread position: 70-455
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 68

Conread position: 70-458
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 64

Conread position: 75-487
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 39, 27

Conread position: 76-277
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 57

Conread position: 76-292
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 14

Conread position: 76-296
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 61

Conread position: 76-306
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 146, 59

Conread position: 76-327
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 59

Conread position: 76-358
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 26

Conread position: 76-417
Cow position:
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 76-447
Cow position:
Alignm length: 376
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 51

Conread position: 76-448
Cow position:
Alignm length: 385
Alignm identity: 251
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 91, 61

Conread position: 76-466
Cow position:
Alignm length: 405
Alignm identity: 276
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 21

Conread position: 76-482
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 66

Conread position: 76-486
Cow position:
Alignm length: 413
Alignm identity: 277
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 96, 61

Conread position: 76-488
Cow position:
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 72

Conread position: 77-314
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 60

Conread position: 77-488
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 78-288
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 65

Conread position: 78-314
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 109, 59

Conread position: 78-316
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 24

Conread position: 78-428
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-486
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 278

Conread position: 79-334
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 56

Conread position: 79-488
Cow position:
Alignm length: 419
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 55

Conread position: 85-337
Cow position:
Alignm length: 259
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 48

Conread position: 85-373
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 52

Conread position: 85-439
Cow position:
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 49

Conread position: 86-488
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 87-488
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 50

Conread position: 140-470
Cow position:
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 311

Conread position: 144-327
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 122

Conread position: 301-481
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 75

Conread position: 304-488
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 30, 85

Conread position: 331-488
Cow position:
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 0

Show alignments to all cow chromosomes.