Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 153
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 114
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 152
               

               Conread position:
               1-466
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 204
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               342
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               2-293
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               2-306
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 156
               

               Conread position:
               5-378
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               5-477
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 148
               

               Conread position:
               8-488
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               45-372
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               57-289
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               59-316
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               61-451
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               61-488
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               64-454
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               65-293
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               66-296
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               66-359
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               66-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               67-434
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               172, 76
               

               Conread position:
               68-442
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               68-466
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 69
               

               Conread position:
               68-488
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               69-286
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-291
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               69-293
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-302
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-417
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               69-447
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               69-469
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               288
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-476
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               70-417
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               71, 98
               

               Conread position:
               70-470
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               70-471
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               70-475
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               95, 63
               

               Conread position:
               76-304
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               76-306
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               146, 59
               

               Conread position:
               76-315
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               91, 61
               

               Conread position:
               76-400
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               129, 45
               

               Conread position:
               76-400
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               76-450
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               76-482
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               151, 59
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 58
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               123, 91
               

               Conread position:
               77-376
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               77-450
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               77-470
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 62
               

               Conread position:
               78-322
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               78-364
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               78-434
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 57
               

               Conread position:
               78-438
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               78-450
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-461
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 12
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 62
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               79-306
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               140, 42
               

               Conread position:
               79-314
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               141, 58
               

               Conread position:
               79-485
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               80-458
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 113
               

               Conread position:
               81-398
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               81-487
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 56
               

               Conread position:
               85-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               89-420
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               133-470
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               170-343
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               50, 115
               

               Conread position:
               208-344
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               297-488
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 71
               
Show alignments to all cow chromosomes.