Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 159
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               1-383
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               20, 147
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               1-454
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 38
               

               Conread position:
               1-456
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               322
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 136
               

               Conread position:
               1-458
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 156
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 143
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               352
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               2-488
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 144
               

               Conread position:
               9-282
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               37-306
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               39-329
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               50-423
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               60-292
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               61-460
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               61-485
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               62-302
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               65-302
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               67-308
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               67-439
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               67-457
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               68-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               152, 73
               

               Conread position:
               68-458
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               69-293
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-295
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-306
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               69-359
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               69-359
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               69-448
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-466
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-475
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-480
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 97
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               130, 68
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               70-318
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               70-324
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 84
               

               Conread position:
               70-392
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-400
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-434
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               255, 67
               

               Conread position:
               70-439
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               70-459
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               70-470
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               70-482
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               70-486
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               72-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 65
               

               Conread position:
               75-451
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 62
               

               Conread position:
               76-294
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               76-296
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               76-304
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               76-449
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               25, 30
               

               Conread position:
               76-449
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               229, 63
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-458
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 59
               

               Conread position:
               76-459
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               76-469
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               76-478
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               116, 59
               

               Conread position:
               76-485
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 50
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               77-359
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               143, 55
               

               Conread position:
               78-294
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               78-365
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               78-459
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               100, 42
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-485
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 59
               

               Conread position:
               79-285
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               79-486
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               141, 54
               

               Conread position:
               79-486
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               80-479
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 54
               

               Conread position:
               80-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               140-488
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 159
               

               Conread position:
               140-488
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               85, 268
               
Show alignments to all cow chromosomes.