Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               278
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               312
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 152
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 154
               

               Conread position:
               2-458
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               6-458
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 139
               

               Conread position:
               57-488
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               60-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               61-470
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               63-451
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               64-314
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 131
               

               Conread position:
               64-367
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               64-487
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               65-451
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               66-304
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               66-476
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               66-488
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               67-301
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               67-476
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               103, 128
               

               Conread position:
               68-482
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               68-488
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 69
               

               Conread position:
               69-294
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-316
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-321
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-323
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-328
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-459
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               69-470
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-475
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-479
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               70-303
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               70-438
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               70-439
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               143, 67
               

               Conread position:
               70-450
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               97, 65
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               97, 67
               

               Conread position:
               70-451
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               70-460
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               117, 63
               

               Conread position:
               70-470
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 65
               

               Conread position:
               70-482
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 71
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 66
               

               Conread position:
               70-488
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               296
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 32
               

               Conread position:
               71-400
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               76-301
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               76-337
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               106, 61
               

               Conread position:
               76-449
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               76-482
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 26
               

               Conread position:
               76-484
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 59
               

               Conread position:
               76-486
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 58
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               77-309
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               77-477
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               78-316
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-342
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-396
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               78-426
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               129, 59
               

               Conread position:
               78-432
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 57
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               78-458
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               78-488
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               71, 101
               

               Conread position:
               79-428
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               79-449
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               77, 53
               

               Conread position:
               79-451
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               79-451
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               79-488
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               81-464
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               82-426
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 53
               
Show alignments to all cow chromosomes.