Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-262
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 118

Conread position: 1-285
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 156

Conread position: 1-292
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 149

Conread position: 1-304
Cow position:
Alignm length: 329
Alignm identity: 237
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 121

Conread position: 1-306
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 75

Conread position: 1-306
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 60

Conread position: 1-316
Cow position:
Alignm length: 342
Alignm identity: 235
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 152

Conread position: 1-320
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 20, 180

Conread position: 1-382
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 151

Conread position: 1-470
Cow position:
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 120

Conread position: 1-474
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 152

Conread position: 1-477
Cow position:
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-485
Cow position:
Alignm length: 519
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 32

Conread position: 1-488
Cow position:
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-488
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-488
Cow position:
Alignm length: 530
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 5

Conread position: 4-485
Cow position:
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 152

Conread position: 4-488
Cow position:
Alignm length: 521
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 13-439
Cow position:
Alignm length: 457
Alignm identity: 304
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 122

Conread position: 57-418
Cow position:
Alignm length: 369
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 81

Conread position: 58-488
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 71

Conread position: 60-288
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 78

Conread position: 61-447
Cow position:
Alignm length: 400
Alignm identity: 265
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 77

Conread position: 62-477
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 62-485
Cow position:
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 76

Conread position: 63-380
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 73

Conread position: 63-462
Cow position:
Alignm length: 414
Alignm identity: 287
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 76

Conread position: 63-488
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 78

Conread position: 67-447
Cow position:
Alignm length: 393
Alignm identity: 252
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 70

Conread position: 67-470
Cow position:
Alignm length: 417
Alignm identity: 286
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 65

Conread position: 68-304
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 34

Conread position: 68-484
Cow position:
Alignm length: 423
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 64

Conread position: 68-488
Cow position:
Alignm length: 447
Alignm identity: 302
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 68

Conread position: 69-286
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 33

Conread position: 69-286
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 61

Conread position: 69-295
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 33

Conread position: 69-303
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 52

Conread position: 69-304
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 8, 34

Conread position: 69-306
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 69-316
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 62

Conread position: 69-318
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 67

Conread position: 69-329
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 69

Conread position: 69-342
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 34

Conread position: 69-388
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 33

Conread position: 69-404
Cow position:
Alignm length: 348
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 67

Conread position: 69-450
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-451
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 69

Conread position: 69-451
Cow position:
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 69-458
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 69-466
Cow position:
Alignm length: 421
Alignm identity: 286
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 67

Conread position: 69-467
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 66

Conread position: 69-470
Cow position:
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-470
Cow position:
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 32

Conread position: 69-470
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 64

Conread position: 69-475
Cow position:
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 68

Conread position: 69-485
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 67

Conread position: 69-487
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-488
Cow position:
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 33

Conread position: 69-488
Cow position:
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 72

Conread position: 69-488
Cow position:
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position:
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 70

Conread position: 69-488
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 69-488
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 70-401
Cow position:
Alignm length: 339
Alignm identity: 224
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 7, 33

Conread position: 70-417
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 68

Conread position: 70-438
Cow position:
Alignm length: 377
Alignm identity: 238
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 67

Conread position: 70-451
Cow position:
Alignm length: 391
Alignm identity: 252
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 100, 65

Conread position: 70-451
Cow position:
Alignm length: 394
Alignm identity: 248
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 69

Conread position: 70-458
Cow position:
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 70-458
Cow position:
Alignm length: 402
Alignm identity: 271
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 7, 33

Conread position: 70-470
Cow position:
Alignm length: 415
Alignm identity: 277
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 6, 100

Conread position: 71-359
Cow position:
Alignm length: 298
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 66

Conread position: 75-488
Cow position:
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 76-291
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 50

Conread position: 76-294
Cow position:
Alignm length: 223
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 143, 60

Conread position: 76-298
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 148, 67

Conread position: 76-304
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 94, 61

Conread position: 76-306
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 59

Conread position: 76-306
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 14

Conread position: 76-340
Cow position:
Alignm length: 266
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 252, 56

Conread position: 76-382
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 90, 59

Conread position: 76-398
Cow position:
Alignm length: 333
Alignm identity: 225
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 111, 59

Conread position: 76-434
Cow position:
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 76-459
Cow position:
Alignm length: 398
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 25

Conread position: 76-466
Cow position:
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 76-473
Cow position:
Alignm length: 402
Alignm identity: 264
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 104, 61

Conread position: 76-488
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 76-488
Cow position:
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 56

Conread position: 76-488
Cow position:
Alignm length: 417
Alignm identity: 273
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 144, 61

Conread position: 78-322
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 44

Conread position: 78-334
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 142, 59

Conread position: 78-342
Cow position:
Alignm length: 270
Alignm identity: 194
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 23

Conread position: 78-351
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 78-448
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 55

Conread position: 78-451
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 84, 46

Conread position: 78-451
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-465
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 141, 57

Conread position: 78-470
Cow position:
Alignm length: 398
Alignm identity: 262
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 142, 59

Conread position: 78-476
Cow position:
Alignm length: 413
Alignm identity: 268
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 28, 23

Conread position: 78-484
Cow position:
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 47

Conread position: 78-488
Cow position:
Alignm length: 414
Alignm identity: 276
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 142, 57

Conread position: 78-488
Cow position:
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 59

Conread position: 79-329
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 145, 56

Conread position: 79-329
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 56

Conread position: 79-470
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 80-485
Cow position:
Alignm length: 415
Alignm identity: 285
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 15

Conread position: 81-482
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 56

Conread position: 85-447
Cow position:
Alignm length: 367
Alignm identity: 227
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 317

Conread position: 87-488
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 50

Conread position: 145-488
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 253

Conread position: 146-451
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 77, 107

Conread position: 168-433
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 95

Conread position: 170-470
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 237

Conread position: 170-488
Cow position:
Alignm length: 326
Alignm identity: 230
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 12, 24

Conread position: 178-293
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 179-304
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 211-439
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 297-488
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 65

Conread position: 367-488
Cow position:
Alignm length: 122
Alignm identity: 107
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.