Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-293
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 5

Conread position: 1-306
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 156

Conread position: 1-372
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 154

Conread position: 1-406
Cow position:
Alignm length: 438
Alignm identity: 298
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 155

Conread position: 1-415
Cow position:
Alignm length: 442
Alignm identity: 299
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 31, 153

Conread position: 1-442
Cow position:
Alignm length: 456
Alignm identity: 301
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 63

Conread position: 1-459
Cow position:
Alignm length: 470
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 62

Conread position: 1-466
Cow position:
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 155

Conread position: 1-466
Cow position:
Alignm length: 510
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 154

Conread position: 1-481
Cow position:
Alignm length: 520
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 122

Conread position: 1-485
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 504

Conread position: 1-485
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 177

Conread position: 5-488
Cow position:
Alignm length: 512
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 99

Conread position: 10-488
Cow position:
Alignm length: 505
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 61-304
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 16, 26

Conread position: 61-340
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 42

Conread position: 61-367
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 40

Conread position: 61-424
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 61-451
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 77

Conread position: 61-451
Cow position:
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 78

Conread position: 61-488
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 61-488
Cow position:
Alignm length: 437
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 61

Conread position: 64-488
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 95

Conread position: 66-481
Cow position:
Alignm length: 431
Alignm identity: 288
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 11, 72

Conread position: 67-402
Cow position:
Alignm length: 344
Alignm identity: 216
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 70

Conread position: 67-434
Cow position:
Alignm length: 374
Alignm identity: 245
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 105, 76

Conread position: 68-466
Cow position:
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 69-275
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 8, 67

Conread position: 69-286
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 69

Conread position: 69-303
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 62

Conread position: 69-304
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 69

Conread position: 69-304
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 58

Conread position: 69-304
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 69

Conread position: 69-304
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 65

Conread position: 69-306
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 71

Conread position: 69-307
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 8, 69

Conread position: 69-314
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 69

Conread position: 69-326
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 33

Conread position: 69-334
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 67

Conread position: 69-340
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 69

Conread position: 69-359
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 44

Conread position: 69-387
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 50

Conread position: 69-400
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 8, 67

Conread position: 69-413
Cow position:
Alignm length: 355
Alignm identity: 238
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 69

Conread position: 69-414
Cow position:
Alignm length: 371
Alignm identity: 258
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 71

Conread position: 69-447
Cow position:
Alignm length: 386
Alignm identity: 263
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 65

Conread position: 69-454
Cow position:
Alignm length: 394
Alignm identity: 266
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 69

Conread position: 69-457
Cow position:
Alignm length: 398
Alignm identity: 256
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 34

Conread position: 69-457
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 8, 67

Conread position: 69-460
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-467
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 66

Conread position: 69-470
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 8, 34

Conread position: 69-476
Cow position:
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 69-477
Cow position:
Alignm length: 416
Alignm identity: 282
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 69

Conread position: 69-482
Cow position:
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 69-488
Cow position:
Alignm length: 433
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 70

Conread position: 70-301
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 65

Conread position: 70-357
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 93, 51

Conread position: 70-426
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 97, 65

Conread position: 70-427
Cow position:
Alignm length: 364
Alignm identity: 233
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 67

Conread position: 70-431
Cow position:
Alignm length: 372
Alignm identity: 241
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 67

Conread position: 70-451
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 66

Conread position: 70-484
Cow position:
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 70-485
Cow position:
Alignm length: 424
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 63

Conread position: 73-303
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 62

Conread position: 73-447
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 57

Conread position: 75-400
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 55

Conread position: 76-281
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 61

Conread position: 76-290
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 141, 61

Conread position: 76-304
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 45

Conread position: 76-319
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 144, 56

Conread position: 76-352
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 26

Conread position: 76-363
Cow position:
Alignm length: 295
Alignm identity: 195
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 61

Conread position: 76-408
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 252, 59

Conread position: 76-451
Cow position:
Alignm length: 386
Alignm identity: 257
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 59

Conread position: 76-451
Cow position:
Alignm length: 384
Alignm identity: 240
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 81

Conread position: 76-456
Cow position:
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 61

Conread position: 76-478
Cow position:
Alignm length: 417
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 25

Conread position: 76-486
Cow position:
Alignm length: 428
Alignm identity: 277
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 110, 36

Conread position: 76-486
Cow position:
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 58

Conread position: 76-488
Cow position:
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 43

Conread position: 76-488
Cow position:
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 30

Conread position: 76-488
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 61

Conread position: 76-488
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 76-488
Cow position:
Alignm length: 443
Alignm identity: 307
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 85, 43

Conread position: 77-294
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 143, 60

Conread position: 77-330
Cow position:
Alignm length: 265
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 122, 58

Conread position: 78-288
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 24

Conread position: 78-301
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 59

Conread position: 78-327
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 121, 59

Conread position: 78-382
Cow position:
Alignm length: 323
Alignm identity: 225
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 85, 54

Conread position: 78-389
Cow position:
Alignm length: 322
Alignm identity: 218
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 23

Conread position: 78-400
Cow position:
Alignm length: 330
Alignm identity: 219
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 92, 59

Conread position: 78-402
Cow position:
Alignm length: 331
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 21

Conread position: 78-408
Cow position:
Alignm length: 343
Alignm identity: 234
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 121, 59

Conread position: 78-432
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 24

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position:
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 28

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 249, 57

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 24

Conread position: 78-458
Cow position:
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 59

Conread position: 78-467
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 24

Conread position: 78-470
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-488
Cow position:
Alignm length: 420
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 59

Conread position: 79-281
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 58

Conread position: 79-286
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 23

Conread position: 79-306
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 79-426
Cow position:
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 79-450
Cow position:
Alignm length: 381
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 58

Conread position: 79-470
Cow position:
Alignm length: 400
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 108, 58

Conread position: 80-447
Cow position:
Alignm length: 388
Alignm identity: 259
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 63

Conread position: 80-488
Cow position:
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 80-488
Cow position:
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 52

Conread position: 82-396
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 146, 55

Conread position: 82-399
Cow position:
Alignm length: 330
Alignm identity: 239
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 85, 55

Conread position: 86-477
Cow position:
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 138, 166

Conread position: 87-448
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 48

Conread position: 90-438
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 47

Conread position: 91-487
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 35

Conread position: 140-470
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 80, 0

Conread position: 169-306
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 23

Conread position: 170-385
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 122

Conread position: 179-477
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 154, 50

Conread position: 186-488
Cow position:
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 132

Conread position: 342-488
Cow position:
Alignm length: 151
Alignm identity: 126
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 115, 6

Conread position: 363-482
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.