Cow genome map
Conread name: | rsin05_g3.y1 |
Conread position: | 1-276 |
Cow position: | chr9:5030393-5030100 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 205 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 30, 152 |
Conread position: | 1-282 |
Cow position: | chr9:41958260-41957976 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 207 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 31, 72 |
Conread position: | 1-284 |
Cow position: | chr9:50293919-50294219 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 212 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 31, 59 |
Conread position: | 1-290 |
Cow position: | chr9:3075675-3075988 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 222 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 32, 155 |
Conread position: | 1-302 |
Cow position: | chr9:29825915-29825601 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 215 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 30, 152 |
Conread position: | 1-304 |
Cow position: | chr9:42172255-42172573 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 232 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 18, 124 |
Conread position: | 1-307 |
Cow position: | chr9:34945485-34945158 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 234 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 31, 17 |
Conread position: | 1-470 |
Cow position: | chr9:22656337-22656826 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 120 |
Conread position: | 1-484 |
Cow position: | chr9:8612911-8612394 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 151 |
Conread position: | 1-488 |
Cow position: | chr9:52632906-52633393 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 155 |
Conread position: | 3-487 |
Cow position: | chr9:38547011-38546518 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 354 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 30, 152 |
Conread position: | 4-488 |
Cow position: | chr9:48773936-48773445 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 152 |
Conread position: | 5-289 |
Cow position: | chr9:9957649-9957345 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 222 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 26, 151 |
Conread position: | 31-477 |
Cow position: | chr9:38032560-38033029 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 24 |
Conread position: | 60-397 |
Cow position: | chr9:9558511-9558162 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 238 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 17, 75 |
Conread position: | 60-470 |
Cow position: | chr9:35203433-35203004 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 286 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 17, 76 |
Conread position: | 61-488 |
Cow position: | chr9:38183947-38184382 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 77 |
Conread position: | 62-451 |
Cow position: | chr9:2548079-2547690 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 263 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 9, 42 |
Conread position: | 64-465 |
Cow position: | chr9:53110048-53109661 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 277 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 17, 74 |
Conread position: | 66-476 |
Cow position: | chr9:11286279-11285870 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 283 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 11, 73 |
Conread position: | 67-292 |
Cow position: | chr9:9402642-9402861 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 155 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 106, 74 |
Conread position: | 67-439 |
Cow position: | chr9:47390821-47390438 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 257 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 100, 68 |
Conread position: | 67-470 |
Cow position: | chr9:4859074-4858666 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 100, 70 |
Conread position: | 67-478 |
Cow position: | chr9:35023484-35023895 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 272 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 111, 70 |
Conread position: | 69-277 |
Cow position: | chr9:33067740-33067532 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-284 |
Cow position: | chr9:2910617-2910398 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 8, 53 |
Conread position: | 69-284 |
Cow position: | chr9:5518087-5518307 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-291 |
Cow position: | chr9:23540921-23541143 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 163 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-294 |
Cow position: | chr9:58615069-58614845 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 111, 68 |
Conread position: | 69-304 |
Cow position: | chr9:47263658-47263899 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 171 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 65 |
Conread position: | 69-322 |
Cow position: | chr9:15006254-15006514 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 189 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-337 |
Cow position: | chr9:30162719-30162451 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 205 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 8, 34 |
Conread position: | 69-400 |
Cow position: | chr9:41932597-41932263 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 244 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-448 |
Cow position: | chr9:42628155-42628528 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 264 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-451 |
Cow position: | chr9:13181534-13181913 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 264 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-451 |
Cow position: | chr9:22803037-22802660 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 261 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 8, 34 |
Conread position: | 69-451 |
Cow position: | chr9:37510535-37510160 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 67 |
Conread position: | 69-451 |
Cow position: | chr9:48017301-48017679 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-453 |
Cow position: | chr9:27892104-27892493 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 265 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 8, 341 |
Conread position: | 69-454 |
Cow position: | chr9:62668927-62668539 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 261 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 8, 31 |
Conread position: | 69-457 |
Cow position: | chr9:10676005-10676393 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 247 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 8, 65 |
Conread position: | 69-462 |
Cow position: | chr9:49292567-49292969 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 277 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 9, 64 |
Conread position: | 69-464 |
Cow position: | chr9:29338513-29338907 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-465 |
Cow position: | chr9:26978485-26978876 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 267 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 8, 34 |
Conread position: | 69-475 |
Cow position: | chr9:34092883-34093314 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 65 |
Conread position: | 69-485 |
Cow position: | chr9:47926432-47926018 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 53 |
Conread position: | 69-486 |
Cow position: | chr9:24996976-24997415 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-486 |
Cow position: | chr9:53607871-53608286 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 33 |
Conread position: | 69-487 |
Cow position: | chr9:37017407-37016993 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-488 |
Cow position: | chr9:5501362-5500960 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 291 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 69-488 |
Cow position: | chr9:34310565-34310129 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 69 |
Conread position: | 70-336 |
Cow position: | chr9:8720280-8720014 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 190 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 7, 57 |
Conread position: | 70-442 |
Cow position: | chr9:55299006-55298639 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 239 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 71, 95 |
Conread position: | 70-448 |
Cow position: | chr9:23428707-23429089 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 247 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 71, 129 |
Conread position: | 70-458 |
Cow position: | chr9:14343449-14343051 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 265 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 70-470 |
Cow position: | chr9:44914592-44914964 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 7, 64 |
Conread position: | 70-487 |
Cow position: | chr9:52407684-52407270 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 66 |
Conread position: | 75-314 |
Cow position: | chr9:4630987-4630764 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 165 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 123, 60 |
Conread position: | 75-454 |
Cow position: | chr9:21963093-21963472 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 60 |
Conread position: | 75-488 |
Cow position: | chr9:5246362-5245964 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 59 |
Conread position: | 75-488 |
Cow position: | chr9:20988926-20989355 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 295 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 44, 27 |
Conread position: | 76-304 |
Cow position: | chr9:12184337-12184102 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 168 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 87, 59 |
Conread position: | 76-342 |
Cow position: | chr9:20816356-20816090 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 193 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 111, 61 |
Conread position: | 76-466 |
Cow position: | chr9:17740433-17740819 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 61 |
Conread position: | 76-488 |
Cow position: | chr9:19382851-19382427 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 124 |
Conread position: | 76-488 |
Cow position: | chr9:21459647-21460050 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 61 |
Conread position: | 76-488 |
Cow position: | chr9:46316274-46316681 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 45 |
Conread position: | 77-305 |
Cow position: | chr9:24398621-24398850 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 90, 60 |
Conread position: | 78-304 |
Cow position: | chr9:34467159-34467373 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 146, 59 |
Conread position: | 78-394 |
Cow position: | chr9:13186214-13186529 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 220 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 94, 43 |
Conread position: | 78-438 |
Cow position: | chr9:217472-217115 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 241 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 149, 59 |
Conread position: | 78-451 |
Cow position: | chr9:18478261-18477888 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 23 |
Conread position: | 78-451 |
Cow position: | chr9:29516253-29515880 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 24 |
Conread position: | 78-451 |
Cow position: | chr9:37108741-37109114 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 23 |
Conread position: | 79-292 |
Cow position: | chr9:50668336-50668119 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 154 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 56 |
Conread position: | 79-303 |
Cow position: | chr9:23043469-23043233 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 88, 55 |
Conread position: | 81-472 |
Cow position: | chr9:19266641-19267045 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 286 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 87, 56 |
Conread position: | 82-372 |
Cow position: | chr9:35357420-35357699 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 210 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 82-449 |
Cow position: | chr9:7410288-7409928 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 59 |
Conread position: | 87-456 |
Cow position: | chr9:31077174-31077539 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 50 |
Conread position: | 88-459 |
Cow position: | chr9:36601913-36602284 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 253 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 101, 47 |
Conread position: | 89-475 |
Cow position: | chr9:2597177-2597560 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 265 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 78, 46 |
Conread position: | 140-451 |
Cow position: | chr9:22625964-22626279 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 222 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 47, 36 |
Conread position: | 148-488 |
Cow position: | chr9:44108386-44108727 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 145 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 186, 228 |
Conread position: | 303-487 |
Cow position: | chr9:11201868-11201696 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 147 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 30, 51 |
Conread position: | 310-487 |
Cow position: | chr9:58853798-58853619 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 140 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 25, 89 |
Conread position: | 327-488 |
Cow position: | chr9:20839878-20839718 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 132 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 130, 75 |
Conread position: | 369-487 |
Cow position: | chr9:11364115-11363998 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 14, 23 |
Show alignments to all cow chromosomes.