Cow genome map


           Conread name:
           rsin05_g3.y1
        

               Conread position:
               1-276
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               31, 72
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 155
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               1-304
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 155
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               354
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               4-488
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 152
               

               Conread position:
               5-289
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 151
               

               Conread position:
               31-477
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               60-397
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               60-470
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               61-488
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               62-451
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               64-465
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               66-476
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               67-292
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               67-439
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               67-470
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               67-478
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               111, 70
               

               Conread position:
               69-277
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-284
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               69-284
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-291
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-294
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               111, 68
               

               Conread position:
               69-304
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-322
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-337
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-400
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-448
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 67
               

               Conread position:
               69-451
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-453
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 341
               

               Conread position:
               69-454
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               69-457
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-462
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               69-464
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-465
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               8, 34
               

               Conread position:
               69-475
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 65
               

               Conread position:
               69-485
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-486
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               69-487
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               69-488
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               70-336
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               70-442
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 95
               

               Conread position:
               70-448
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 129
               

               Conread position:
               70-458
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               70-470
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               70-487
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               75-314
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 60
               

               Conread position:
               75-454
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 60
               

               Conread position:
               75-488
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               75-488
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               76-304
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 59
               

               Conread position:
               76-342
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 61
               

               Conread position:
               76-466
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 61
               

               Conread position:
               76-488
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               77-305
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               78-304
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               146, 59
               

               Conread position:
               78-394
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               78-438
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               78-451
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 23
               

               Conread position:
               79-292
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 56
               

               Conread position:
               79-303
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               81-472
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               82-372
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               82-449
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               87-456
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               88-459
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               89-475
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 46
               

               Conread position:
               140-451
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               148-488
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               186, 228
               

               Conread position:
               303-487
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               310-487
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               327-488
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               369-487
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 23
               
Show alignments to all cow chromosomes.