Cow genome map

Conread name: rsin05_g3.y1

Conread position: 1-285
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 31, 153

Conread position: 1-288
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 148

Conread position: 1-296
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 153

Conread position: 1-296
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 20, 139

Conread position: 1-302
Cow position:
Alignm length: 324
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 144

Conread position: 1-350
Cow position:
Alignm length: 381
Alignm identity: 260
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 66

Conread position: 1-409
Cow position:
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 196

Conread position: 1-451
Cow position:
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 117

Conread position: 1-455
Cow position:
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 142

Conread position: 1-459
Cow position:
Alignm length: 507
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 138

Conread position: 1-466
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 155

Conread position: 1-477
Cow position:
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 153

Conread position: 1-480
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 156

Conread position: 1-488
Cow position:
Alignm length: 519
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 118

Conread position: 1-488
Cow position:
Alignm length: 540
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 237

Conread position: 2-476
Cow position:
Alignm length: 511
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 138

Conread position: 4-485
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 14-451
Cow position:
Alignm length: 462
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 139

Conread position: 34-457
Cow position:
Alignm length: 442
Alignm identity: 296
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 27

Conread position: 60-304
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 78

Conread position: 60-486
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 75

Conread position: 61-340
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 16, 77

Conread position: 62-474
Cow position:
Alignm length: 426
Alignm identity: 285
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 8, 77

Conread position: 62-488
Cow position:
Alignm length: 440
Alignm identity: 299
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 17, 75

Conread position: 62-488
Cow position:
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 76

Conread position: 63-306
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 58

Conread position: 63-488
Cow position:
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 72

Conread position: 66-322
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 76

Conread position: 66-454
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 73

Conread position: 66-470
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 66-488
Cow position:
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 36

Conread position: 67-301
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 66

Conread position: 67-439
Cow position:
Alignm length: 384
Alignm identity: 241
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 36

Conread position: 68-296
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 34

Conread position: 68-352
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 67

Conread position: 68-488
Cow position:
Alignm length: 435
Alignm identity: 290
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 70

Conread position: 69-283
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 50

Conread position: 69-303
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 215

Conread position: 69-306
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 13

Conread position: 69-306
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 33

Conread position: 69-306
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 35

Conread position: 69-307
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 44

Conread position: 69-314
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 69

Conread position: 69-314
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 65

Conread position: 69-342
Cow position:
Alignm length: 280
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 34

Conread position: 69-342
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 34

Conread position: 69-351
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 7, 101

Conread position: 69-400
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 69

Conread position: 69-410
Cow position:
Alignm length: 350
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 42

Conread position: 69-425
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 33

Conread position: 69-426
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 94, 110

Conread position: 69-435
Cow position:
Alignm length: 373
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 69

Conread position: 69-445
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 90

Conread position: 69-448
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 13

Conread position: 69-448
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 69-450
Cow position:
Alignm length: 390
Alignm identity: 263
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 56

Conread position: 69-451
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 8, 69

Conread position: 69-451
Cow position:
Alignm length: 390
Alignm identity: 266
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 8, 28

Conread position: 69-478
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 67

Conread position: 69-488
Cow position:
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 69-488
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 69-488
Cow position:
Alignm length: 444
Alignm identity: 311
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 58

Conread position: 69-488
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 65

Conread position: 69-488
Cow position:
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 70-261
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 68

Conread position: 70-304
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 7, 26

Conread position: 70-400
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 97, 67

Conread position: 70-427
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 67

Conread position: 70-431
Cow position:
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 95

Conread position: 70-439
Cow position:
Alignm length: 372
Alignm identity: 228
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 67

Conread position: 70-450
Cow position:
Alignm length: 399
Alignm identity: 272
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 39, 31

Conread position: 70-450
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 93, 70

Conread position: 70-451
Cow position:
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 71-458
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 96, 64

Conread position: 76-286
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 26

Conread position: 76-286
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 59

Conread position: 76-314
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 144, 68

Conread position: 76-334
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 22

Conread position: 76-359
Cow position:
Alignm length: 288
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 61

Conread position: 76-426
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 61

Conread position: 76-451
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 76-453
Cow position:
Alignm length: 388
Alignm identity: 247
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 61

Conread position: 76-466
Cow position:
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 61

Conread position: 76-486
Cow position:
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 59

Conread position: 76-487
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 61

Conread position: 76-488
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 61

Conread position: 76-488
Cow position:
Alignm length: 430
Alignm identity: 286
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 87, 59

Conread position: 76-488
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 76-488
Cow position:
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 43

Conread position: 76-488
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 59

Conread position: 78-301
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 59

Conread position: 78-319
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 59

Conread position: 78-339
Cow position:
Alignm length: 266
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 24

Conread position: 78-345
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 141, 57

Conread position: 78-368
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 142, 57

Conread position: 78-444
Cow position:
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 59

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-451
Cow position:
Alignm length: 378
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 78-451
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-466
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-466
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 23

Conread position: 78-469
Cow position:
Alignm length: 399
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 24

Conread position: 78-470
Cow position:
Alignm length: 399
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 59

Conread position: 78-470
Cow position:
Alignm length: 399
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 78-487
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 59

Conread position: 80-304
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 21

Conread position: 81-488
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 86, 54

Conread position: 90-485
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 47

Conread position: 90-488
Cow position:
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 27

Conread position: 111-488
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 24

Conread position: 140-482
Cow position:
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 214

Conread position: 364-485
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 38

Show alignments to all cow chromosomes.