Cow genome map
| Conread name: | rsin12_e19.y1 |
| Conread position: | 289-560 |
| Cow position: | chr6:65842140-65841868 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 294-560 |
| Cow position: | chr6:44550545-44550814 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 307-558 |
| Cow position: | chr6:3277417-3277668 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 315-556 |
| Cow position: | chr6:25794296-25794053 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 315-558 |
| Cow position: | chr6:1099654-1099899 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 196 |
| Conread position: | 315-558 |
| Cow position: | chr6:10644077-10643829 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:914159-913934 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:1822104-1822352 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 199 |
| Conread position: | 315-560 |
| Cow position: | chr6:8760776-8761024 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:14852054-14852303 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:15140656-15140903 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 146 |
| Conread position: | 315-560 |
| Cow position: | chr6:17046583-17046334 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:20560583-20560832 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:28105330-28105573 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 89, 122 |
| Conread position: | 315-560 |
| Cow position: | chr6:29312021-29311772 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:34892475-34892725 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:35876186-35876435 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:36526578-36526329 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:38900642-38900890 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 315-560 |
| Cow position: | chr6:47042669-47042918 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 315-560 |
| Cow position: | chr6:58027277-58027033 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 151 |
| Conread position: | 316-555 |
| Cow position: | chr6:27471127-27470883 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 316-560 |
| Cow position: | chr6:27529479-27529726 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 88, 242 |
| Conread position: | 325-560 |
| Cow position: | chr6:33994808-33995047 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 326-560 |
| Cow position: | chr6:25214773-25214535 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 338-560 |
| Cow position: | chr6:28275488-28275257 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 343-560 |
| Cow position: | chr6:3544986-3544764 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 406-560 |
| Cow position: | chr6:43607269-43607425 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 435-544 |
| Cow position: | chr6:12092466-12092577 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.