Cow genome map
| Conread name: | rsin12_e19.y1 |
| Conread position: | 281-560 |
| Cow position: | chrX:30183499-30183779 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 8 |
| Conread position: | 310-560 |
| Cow position: | chrX:31082338-31082083 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 159, 51 |
| Conread position: | 313-549 |
| Cow position: | chrX:21589334-21589094 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 313-560 |
| Cow position: | chrX:23391232-23391483 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 315-557 |
| Cow position: | chrX:30178629-30178876 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 86, 147 |
| Conread position: | 315-558 |
| Cow position: | chrX:23277382-23277137 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 315-558 |
| Cow position: | chrX:26758242-26758489 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-558 |
| Cow position: | chrX:26766834-26767080 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 181 |
| Conread position: | 315-559 |
| Cow position: | chrX:29853204-29853452 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 315-559 |
| Cow position: | chrX:40246516-40246764 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chrX:2482271-2482521 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chrX:15126878-15127126 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 177 |
| Conread position: | 315-560 |
| Cow position: | chrX:16699666-16699416 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 315-560 |
| Cow position: | chrX:21059146-21058907 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 315-560 |
| Cow position: | chrX:23040764-23041011 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 315-560 |
| Cow position: | chrX:26427287-26427531 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 315-560 |
| Cow position: | chrX:29096566-29096317 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 315-560 |
| Cow position: | chrX:44387486-44387237 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 427-560 |
| Cow position: | chrX:18954276-18954409 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.