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Cow genome map

           
Conread name:
           
rsin14_d13.y1
        

               
Conread position:
               
4-482
               

               
Cow position:
               
chr21:6833696-6834167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
24-483
               

               
Cow position:
               
chr21:33997570-33997108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 246
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr21:23683211-23683559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 239
               

               
Conread position:
               
25-458
               

               
Cow position:
               
chr21:28989281-28989704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
25-480
               

               
Cow position:
               
chr21:24887659-24888115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
27-376
               

               
Cow position:
               
chr21:13395220-13395564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
27-482
               

               
Cow position:
               
chr21:39664707-39664280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
27-485
               

               
Cow position:
               
chr21:31576178-31576618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
28-359
               

               
Cow position:
               
chr21:13763288-13763617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 162
               

               
Conread position:
               
30-435
               

               
Cow position:
               
chr21:4567959-4568356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
30-458
               

               
Cow position:
               
chr21:28993959-28993522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 290
               

               
Conread position:
               
30-480
               

               
Cow position:
               
chr21:20160351-20160792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
30-482
               

               
Cow position:
               
chr21:5566658-5567104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
30-482
               

               
Cow position:
               
chr21:18850558-18850106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
30-482
               

               
Cow position:
               
chr21:40786339-40786795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 84
               

               
Conread position:
               
30-487
               

               
Cow position:
               
chr21:5898726-5898279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
31-476
               

               
Cow position:
               
chr21:2679227-2679669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
31-480
               

               
Cow position:
               
chr21:26244612-26245030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
31-482
               

               
Cow position:
               
chr21:28810581-28810143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
31-482
               

               
Cow position:
               
chr21:39401269-39401709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
31-482
               

               
Cow position:
               
chr21:41974709-41974260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 18
               

               
Conread position:
               
33-431
               

               
Cow position:
               
chr21:20107078-20106689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
33-451
               

               
Cow position:
               
chr21:3236202-3236613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
37-390
               

               
Cow position:
               
chr21:48484765-48484420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 121
               

               
Conread position:
               
37-434
               

               
Cow position:
               
chr21:2786119-2785706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 172
               

               
Conread position:
               
37-481
               

               
Cow position:
               
chr21:34010712-34010279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
38-367
               

               
Cow position:
               
chr21:45151955-45151616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
38-386
               

               
Cow position:
               
chr21:17434644-17434295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
38-390
               

               
Cow position:
               
chr21:393696-394046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 282
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr21:42905694-42905304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr21:42914068-42913676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 28
               

               
Conread position:
               
38-455
               

               
Cow position:
               
chr21:26648327-26647917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 26
               

               
Conread position:
               
38-456
               

               
Cow position:
               
chr21:3813792-3813391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
38-459
               

               
Cow position:
               
chr21:5596836-5597247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr21:43993-44401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr21:7672808-7673219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
38-471
               

               
Cow position:
               
chr21:28881824-28882246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 119
               

               
Conread position:
               
38-472
               

               
Cow position:
               
chr21:2904787-2904370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 228
               

               
Conread position:
               
38-479
               

               
Cow position:
               
chr21:7564646-7564192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
38-480
               

               
Cow position:
               
chr21:81745-82183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 287
               

               
Conread position:
               
38-480
               

               
Cow position:
               
chr21:13048520-13048077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
38-480
               

               
Cow position:
               
chr21:46912221-46912661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 7
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr21:22855898-22856336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr21:27863844-27863395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr21:28512216-28512632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr21:33729110-33729548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 7
               

               
Conread position:
               
38-482
               

               
Cow position:
               
chr21:42540545-42540104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
38-487
               

               
Cow position:
               
chr21:28429125-28429567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
38-488
               

               
Cow position:
               
chr21:5649582-5650025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
39-343
               

               
Cow position:
               
chr21:43631516-43631219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
39-350
               

               
Cow position:
               
chr21:31158931-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
39-351
               

               
Cow position:
               
chr21:28599449-28599764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
39-358
               

               
Cow position:
               
chr21:7132785-7132466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
39-371
               

               
Cow position:
               
chr21:363331-363658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 191
               

               
Conread position:
               
39-379
               

               
Cow position:
               
chr21:33420040-33419707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 202
               

               
Conread position:
               
39-381
               

               
Cow position:
               
chr21:13954188-13954536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
39-383
               

               
Cow position:
               
chr21:34658712-34659054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
39-385
               

               
Cow position:
               
chr21:41957507-41957154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 226
               

               
Conread position:
               
39-386
               

               
Cow position:
               
chr21:18934601-18934942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
39-390
               

               
Cow position:
               
chr21:34738275-34738637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 0
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr21:12616818-12617178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr21:46973458-46973086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
39-428
               

               
Cow position:
               
chr21:30990592-30990214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
39-430
               

               
Cow position:
               
chr21:40244110-40244511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
39-431
               

               
Cow position:
               
chr21:42190482-42190104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr21:912285-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr21:27743417-27743819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
39-434
               

               
Cow position:
               
chr21:35897945-35897569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
39-435
               

               
Cow position:
               
chr21:17713989-17714389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
39-435
               

               
Cow position:
               
chr21:21480503-21480113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr21:5137831-5137411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 348
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr21:13751063-13751469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr21:16909731-16910137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 177
               

               
Conread position:
               
39-440
               

               
Cow position:
               
chr21:26829559-26829187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
39-444
               

               
Cow position:
               
chr21:28617278-28617671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
39-448
               

               
Cow position:
               
chr21:1463909-1464314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
39-448
               

               
Cow position:
               
chr21:8985225-8985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 247
               

               
Conread position:
               
39-449
               

               
Cow position:
               
chr21:43240539-43240950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 18
               

               
Conread position:
               
39-450
               

               
Cow position:
               
chr21:13897869-13898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
39-454
               

               
Cow position:
               
chr21:5455310-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
39-454
               

               
Cow position:
               
chr21:18932169-18932577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr21:16612305-16612722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 222
               

               
Conread position:
               
39-461
               

               
Cow position:
               
chr21:17174823-17175244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr21:28210861-28211293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 294
               

               
Conread position:
               
39-472
               

               
Cow position:
               
chr21:4794897-4795334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 275
               

               
Conread position:
               
39-475
               

               
Cow position:
               
chr21:44671429-44671856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 281
               

               
Conread position:
               
39-477
               

               
Cow position:
               
chr21:5392862-5392422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
39-478
               

               
Cow position:
               
chr21:29069652-29069212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
39-479
               

               
Cow position:
               
chr21:14760261-14760680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
39-479
               

               
Cow position:
               
chr21:28442412-28442847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
39-480
               

               
Cow position:
               
chr21:2367017-2367448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
39-480
               

               
Cow position:
               
chr21:19766530-19766970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 374
               

               
Conread position:
               
39-480
               

               
Cow position:
               
chr21:24857987-24858431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 283
               

               
Conread position:
               
39-480
               

               
Cow position:
               
chr21:33209875-33210304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
39-480
               

               
Cow position:
               
chr21:37479635-37480070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:6623824-6624274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:10514488-10514924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:23192842-23192392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 281
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:24222865-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:33983134-33982693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 283
               

               
Conread position:
               
39-481
               

               
Cow position:
               
chr21:38867891-38867471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 126
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:641263-641705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:643013-643442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:8126110-8125687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:9415919-9416369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:11645309-11644848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 260
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:12153809-12154251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 306
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:15584727-15584301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:15976317-15976751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:16696046-16696491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:19196492-19196046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 366
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:19363774-19363341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 122
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:22719104-22718666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:23586539-23587000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:23606350-23606790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 315
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:25382674-25383144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:27230116-27229676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:29214479-29214042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:30232023-30231576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 112
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:34391290-34390857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:37299140-37299580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 276
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:38120779-38121219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 245
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:38900456-38900892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:42500712-42501168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr21:45474079-45473640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
39-483
               

               
Cow position:
               
chr21:20262658-20262216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 270
               

               
Conread position:
               
39-487
               

               
Cow position:
               
chr21:7582229-7581782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
39-487
               

               
Cow position:
               
chr21:23821845-23822278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 32
               

               
Conread position:
               
39-488
               

               
Cow position:
               
chr21:4282188-4281753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
39-488
               

               
Cow position:
               
chr21:4399476-4399925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
39-488
               

               
Cow position:
               
chr21:45971479-45971052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
40-334
               

               
Cow position:
               
chr21:3782777-3783076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-363
               

               
Cow position:
               
chr21:7717110-7716784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
40-363
               

               
Cow position:
               
chr21:13111120-13110792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-378
               

               
Cow position:
               
chr21:27607686-27607343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:1196544-1196890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:2495494-2495151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:10854263-10854611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:17144825-17145171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:23900130-23899784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:24136595-24136940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:27065451-27065111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:27287982-27288327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:28914686-28914342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:39700399-39700053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:47649348-47649690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
40-381
               

               
Cow position:
               
chr21:48459191-48458845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-456
               

               
Cow position:
               
chr21:20925828-20925411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
40-457
               

               
Cow position:
               
chr21:4732540-4732114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
40-460
               

               
Cow position:
               
chr21:30965935-30965513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
40-461
               

               
Cow position:
               
chr21:5021145-5021573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
40-478
               

               
Cow position:
               
chr21:16188132-16187693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
40-480
               

               
Cow position:
               
chr21:25764311-25764752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
40-482
               

               
Cow position:
               
chr21:725212-724767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 120
               

               
Conread position:
               
40-482
               

               
Cow position:
               
chr21:10263719-10264151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
40-482
               

               
Cow position:
               
chr21:36163284-36162841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 5
               

               
Conread position:
               
40-482
               

               
Cow position:
               
chr21:37706740-37706297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
41-480
               

               
Cow position:
               
chr21:44514944-44515380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 228
               

               
Conread position:
               
41-482
               

               
Cow position:
               
chr21:18289342-18289781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 111
               

               
Conread position:
               
41-482
               

               
Cow position:
               
chr21:32191849-32192292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
43-482
               

               
Cow position:
               
chr21:31691161-31691600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
45-447
               

               
Cow position:
               
chr21:36642590-36642987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 241
               

               
Conread position:
               
45-482
               

               
Cow position:
               
chr21:5238088-5238511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
45-482
               

               
Cow position:
               
chr21:27341908-27341477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
46-424
               

               
Cow position:
               
chr21:18494661-18495030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
46-482
               

               
Cow position:
               
chr21:42414416-42413979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
47-482
               

               
Cow position:
               
chr21:30849260-30848823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 181
               

               
Conread position:
               
48-488
               

               
Cow position:
               
chr21:17511468-17511900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 32
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr21:17412605-17412276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
49-386
               

               
Cow position:
               
chr21:18935458-18935782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
49-482
               

               
Cow position:
               
chr21:28923830-28924227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
51-460
               

               
Cow position:
               
chr21:9848301-9847914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
52-334
               

               
Cow position:
               
chr21:26399765-26399479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
52-377
               

               
Cow position:
               
chr21:4080044-4080373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 153
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr21:150166-150495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
52-382
               

               
Cow position:
               
chr21:34301596-34301939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
52-403
               

               
Cow position:
               
chr21:2877822-2877469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
52-460
               

               
Cow position:
               
chr21:4189522-4189937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
52-468
               

               
Cow position:
               
chr21:47802571-47802155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
52-469
               

               
Cow position:
               
chr21:32535670-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 8
               

               
Conread position:
               
52-480
               

               
Cow position:
               
chr21:24607073-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 315
               

               
Conread position:
               
52-482
               

               
Cow position:
               
chr21:395568-395985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
52-482
               

               
Cow position:
               
chr21:44566016-44565604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
52-482
               

               
Cow position:
               
chr21:45916014-45915600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 163
               

               
Conread position:
               
52-482
               

               
Cow position:
               
chr21:46849429-46849010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr21:11740439-11740001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr21:42384199-42384626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 98
               

               
Conread position:
               
54-386
               

               
Cow position:
               
chr21:21968011-21968340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
216, 17
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr21:25344574-25344874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
58-440
               

               
Cow position:
               
chr21:48176525-48176900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
225, 58
               

               
Conread position:
               
58-464
               

               
Cow position:
               
chr21:23785724-23786133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 143
               

               
Conread position:
               
58-488
               

               
Cow position:
               
chr21:4905271-4904845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 126
               

               
Conread position:
               
59-381
               

               
Cow position:
               
chr21:18718366-18718691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
59-440
               

               
Cow position:
               
chr21:17410958-17410582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 79
               

               
Conread position:
               
59-446
               

               
Cow position:
               
chr21:24764964-24765364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
59-482
               

               
Cow position:
               
chr21:34653784-34654191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
59-488
               

               
Cow position:
               
chr21:13089779-13089345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
60-456
               

               
Cow position:
               
chr21:6765004-6764608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 152
               

               
Conread position:
               
60-456
               

               
Cow position:
               
chr21:23500123-23499732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 140
               

               
Conread position:
               
60-458
               

               
Cow position:
               
chr21:45866637-45867028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 13
               

               
Conread position:
               
60-460
               

               
Cow position:
               
chr21:5344359-5344762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 132
               

               
Conread position:
               
60-482
               

               
Cow position:
               
chr21:11228256-11227843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 180
               

               
Conread position:
               
60-482
               

               
Cow position:
               
chr21:36756313-36756717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
62-370
               

               
Cow position:
               
chr21:11707050-11706737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 86
               

               
Conread position:
               
62-450
               

               
Cow position:
               
chr21:19957930-19958300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
205, 81
               

               
Conread position:
               
62-464
               

               
Cow position:
               
chr21:12961213-12960798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
62-482
               

               
Cow position:
               
chr21:13489343-13489764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 114
               

               
Conread position:
               
62-483
               

               
Cow position:
               
chr21:13128396-13127980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
63-456
               

               
Cow position:
               
chr21:17475521-17475915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
66-396
               

               
Cow position:
               
chr21:13703982-13703651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
66-482
               

               
Cow position:
               
chr21:32237004-32237397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
67-465
               

               
Cow position:
               
chr21:19170205-19169807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
69-421
               

               
Cow position:
               
chr21:40058512-40058864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
69-482
               

               
Cow position:
               
chr21:18568945-18568521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
71-460
               

               
Cow position:
               
chr21:11639730-11640118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
71-482
               

               
Cow position:
               
chr21:9940469-9940070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
71-482
               

               
Cow position:
               
chr21:25127319-25127722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 74
               

               
Conread position:
               
71-482
               

               
Cow position:
               
chr21:28734203-28733795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 238
               

               
Conread position:
               
71-488
               

               
Cow position:
               
chr21:10726990-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
74-456
               

               
Cow position:
               
chr21:28998195-28997806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 352
               

               
Conread position:
               
75-481
               

               
Cow position:
               
chr21:43357548-43357139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
80-482
               

               
Cow position:
               
chr21:30607385-30606969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 222
               

               
Conread position:
               
81-467
               

               
Cow position:
               
chr21:44108728-44109105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
81-471
               

               
Cow position:
               
chr21:10882145-10882552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
81-482
               

               
Cow position:
               
chr21:1529509-1529116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
149, 80
               

               
Conread position:
               
82-440
               

               
Cow position:
               
chr21:36793602-36793971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 208
               

               
Conread position:
               
83-363
               

               
Cow position:
               
chr21:42023856-42024122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
83-480
               

               
Cow position:
               
chr21:23801399-23801012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
84-482
               

               
Cow position:
               
chr21:44114408-44114012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
86-458
               

               
Cow position:
               
chr21:39889020-39888655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
86-469
               

               
Cow position:
               
chr21:17643239-17642879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 80
               

               
Conread position:
               
87-456
               

               
Cow position:
               
chr21:33562739-33563100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
88-431
               

               
Cow position:
               
chr21:31676226-31676566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
88-488
               

               
Cow position:
               
chr21:10966959-10967354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 0
               

               
Conread position:
               
89-383
               

               
Cow position:
               
chr21:23478989-23478697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
92-482
               

               
Cow position:
               
chr21:44252098-44251725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
92-483
               

               
Cow position:
               
chr21:36795330-36795722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
93-453
               

               
Cow position:
               
chr21:17417032-17416670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
97-350
               

               
Cow position:
               
chr21:26241563-26241815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
97-449
               

               
Cow position:
               
chr21:18783948-18783603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 46
               

               
Conread position:
               
97-456
               

               
Cow position:
               
chr21:13756294-13756649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
174, 99
               

               
Conread position:
               
98-390
               

               
Cow position:
               
chr21:15867051-15867336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
98-480
               

               
Cow position:
               
chr21:33350481-33350857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
101-460
               

               
Cow position:
               
chr21:21223023-21223378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
102-363
               

               
Cow position:
               
chr21:42348940-42348674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 219
               

               
Conread position:
               
102-482
               

               
Cow position:
               
chr21:3585616-3585250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
102-482
               

               
Cow position:
               
chr21:6713799-6713405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
102-482
               

               
Cow position:
               
chr21:13035309-13034920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 238
               

               
Conread position:
               
107-430
               

               
Cow position:
               
chr21:15445332-15445001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 7
               

               
Conread position:
               
108-481
               

               
Cow position:
               
chr21:16503962-16503592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
161, 294
               

               
Conread position:
               
108-481
               

               
Cow position:
               
chr21:49700290-49699923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 271
               

               
Conread position:
               
110-482
               

               
Cow position:
               
chr21:39403790-39403407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 82
               

               
Conread position:
               
111-482
               

               
Cow position:
               
chr21:17722773-17723132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 124
               

               
Conread position:
               
111-488
               

               
Cow position:
               
chr21:23322332-23321956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 81
               

               
Conread position:
               
113-381
               

               
Cow position:
               
chr21:4267599-4267327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
98, 88
               

               
Conread position:
               
113-482
               

               
Cow position:
               
chr21:10151546-10151923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 79
               

               
Conread position:
               
118-488
               

               
Cow position:
               
chr21:13585304-13584939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
120-480
               

               
Cow position:
               
chr21:41878233-41878587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
121-371
               

               
Cow position:
               
chr21:46242474-46242229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
155, 14
               

               
Conread position:
               
121-459
               

               
Cow position:
               
chr21:5636962-5636625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 197
               

               
Conread position:
               
127-460
               

               
Cow position:
               
chr21:19977096-19977432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
143, 192
               

               
Conread position:
               
134-405
               

               
Cow position:
               
chr21:9278140-9278424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
134-460
               

               
Cow position:
               
chr21:8351529-8351215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
134-480
               

               
Cow position:
               
chr21:27124356-27124005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 125
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr21:33497-33837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 13
               

               
Conread position:
               
138-482
               

               
Cow position:
               
chr21:28626017-28626355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
140-352
               

               
Cow position:
               
chr21:24797473-24797676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr21:48251252-48250983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
124, 173
               

               
Conread position:
               
144-482
               

               
Cow position:
               
chr21:19083822-19083469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
145-460
               

               
Cow position:
               
chr21:31662243-31662563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 166
               

               
Conread position:
               
146-482
               

               
Cow position:
               
chr21:45330158-45329832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
147-456
               

               
Cow position:
               
chr21:18929482-18929792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
147-456
               

               
Cow position:
               
chr21:21982591-21982901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 78
               

               
Conread position:
               
148-487
               

               
Cow position:
               
chr21:43272068-43271727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 52
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr21:13303606-13303827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 112
               

               
Conread position:
               
149-482
               

               
Cow position:
               
chr21:23535500-23535827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
156-341
               

               
Cow position:
               
chr21:9334466-9334282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
157-480
               

               
Cow position:
               
chr21:3498293-3498609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 103
               

               
Conread position:
               
157-482
               

               
Cow position:
               
chr21:19258621-19258936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 185
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr21:27521529-27521222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
158-487
               

               
Cow position:
               
chr21:3763940-3763619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
160-358
               

               
Cow position:
               
chr21:34159756-34159958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
160-372
               

               
Cow position:
               
chr21:34835625-34835425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
160-423
               

               
Cow position:
               
chr21:21143679-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 161
               

               
Conread position:
               
160-454
               

               
Cow position:
               
chr21:1058875-1059169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
160-456
               

               
Cow position:
               
chr21:45330810-45330511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 234
               

               
Conread position:
               
160-460
               

               
Cow position:
               
chr21:28955320-28955604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr21:18828511-18828186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
160-480
               

               
Cow position:
               
chr21:35996969-35997288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
11, 161
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:8206588-8206890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:12801946-12801629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:18780172-18779858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:29002364-29002035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 159
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:41579549-41579874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:41597613-41597929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 237
               

               
Conread position:
               
160-482
               

               
Cow position:
               
chr21:45355634-45355951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
160-488
               

               
Cow position:
               
chr21:6051304-6051625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 156
               

               
Conread position:
               
161-385
               

               
Cow position:
               
chr21:8618073-8618299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
161-402
               

               
Cow position:
               
chr21:37361675-37361437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
161-431
               

               
Cow position:
               
chr21:8451698-8451960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
161-435
               

               
Cow position:
               
chr21:28443580-28443302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
161-456
               

               
Cow position:
               
chr21:18378644-18378934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr21:3381282-3380984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
161-480
               

               
Cow position:
               
chr21:47465325-47465002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
161-481
               

               
Cow position:
               
chr21:2927404-2927084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
161-481
               

               
Cow position:
               
chr21:21652268-21652588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
161-481
               

               
Cow position:
               
chr21:40133954-40134274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 151
               

               
Conread position:
               
161-482
               

               
Cow position:
               
chr21:3818015-3818327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
161-482
               

               
Cow position:
               
chr21:24094945-24094642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 83
               

               
Conread position:
               
161-482
               

               
Cow position:
               
chr21:25800213-25800518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 25
               

               
Conread position:
               
161-482
               

               
Cow position:
               
chr21:41620918-41621243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
161-488
               

               
Cow position:
               
chr21:29484783-29485100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 31
               

               
Conread position:
               
163-456
               

               
Cow position:
               
chr21:13738372-13738652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
163-480
               

               
Cow position:
               
chr21:22860803-22861118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 29
               

               
Conread position:
               
163-482
               

               
Cow position:
               
chr21:33791567-33791263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
164-482
               

               
Cow position:
               
chr21:3361212-3360897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
164-488
               

               
Cow position:
               
chr21:33727659-33727337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
226, 113
               

               
Conread position:
               
165-363
               

               
Cow position:
               
chr21:17428305-17428502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
165-482
               

               
Cow position:
               
chr21:32339932-32339622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
165-483
               

               
Cow position:
               
chr21:10005083-10004767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 136
               

               
Conread position:
               
166-456
               

               
Cow position:
               
chr21:9353244-9353539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 155
               

               
Conread position:
               
166-482
               

               
Cow position:
               
chr21:38449648-38449331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
166-488
               

               
Cow position:
               
chr21:29979953-29979649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
167-386
               

               
Cow position:
               
chr21:9998916-9998694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
167-447
               

               
Cow position:
               
chr21:21077134-21077409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
167-460
               

               
Cow position:
               
chr21:30150464-30150167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
167-460
               

               
Cow position:
               
chr21:35569579-35569285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
167-482
               

               
Cow position:
               
chr21:42135819-42135498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 154
               

               
Conread position:
               
168-456
               

               
Cow position:
               
chr21:34565407-34565117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 151
               

               
Conread position:
               
168-460
               

               
Cow position:
               
chr21:31277627-31277906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
168-480
               

               
Cow position:
               
chr21:42841785-42841481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr21:1591357-1591672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
168-482
               

               
Cow position:
               
chr21:31253341-31253651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
169-359
               

               
Cow position:
               
chr21:13163700-13163887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
169-381
               

               
Cow position:
               
chr21:7666784-7667000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
169-449
               

               
Cow position:
               
chr21:3047493-3047762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
194, 23
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr21:10118360-10118677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 235
               

               
Conread position:
               
170-482
               

               
Cow position:
               
chr21:10601560-10601257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 21
               

               
Conread position:
               
170-487
               

               
Cow position:
               
chr21:17455193-17455508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr21:17193952-17193627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr21:18942021-18941712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
171-377
               

               
Cow position:
               
chr21:19174512-19174722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr21:40065506-40065300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr21:5426755-5427058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 21
               

               
Conread position:
               
171-482
               

               
Cow position:
               
chr21:32559545-32559247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
172-482
               

               
Cow position:
               
chr21:13365151-13365460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr21:22353419-22353231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr21:14452041-14452352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
173-482
               

               
Cow position:
               
chr21:47764301-47763999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr21:6102457-6102165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
174-482
               

               
Cow position:
               
chr21:40589671-40589364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 139
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr21:4268686-4268883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr21:28027616-28027816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
175-482
               

               
Cow position:
               
chr21:18845202-18844894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
178-451
               

               
Cow position:
               
chr21:15610971-15611232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
178-482
               

               
Cow position:
               
chr21:37345286-37344983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 209
               

               
Conread position:
               
179-482
               

               
Cow position:
               
chr21:28190845-28191150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
179-482
               

               
Cow position:
               
chr21:46143760-46144077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
180-479
               

               
Cow position:
               
chr21:46829451-46829157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
180-482
               

               
Cow position:
               
chr21:15911218-15911518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 85
               

               
Conread position:
               
180-488
               

               
Cow position:
               
chr21:13488337-13488649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
181-454
               

               
Cow position:
               
chr21:39450349-39450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
181-482
               

               
Cow position:
               
chr21:9990333-9990628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
182-400
               

               
Cow position:
               
chr21:45375436-45375661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
182-482
               

               
Cow position:
               
chr21:17183741-17184035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
183-469
               

               
Cow position:
               
chr21:45439428-45439131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
184-456
               

               
Cow position:
               
chr21:8235722-8235463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
184-488
               

               
Cow position:
               
chr21:27146172-27145870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 208
               

               
Conread position:
               
185-446
               

               
Cow position:
               
chr21:49662294-49662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
207, 53
               

               
Conread position:
               
185-464
               

               
Cow position:
               
chr21:18790733-18790462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
187-354
               

               
Cow position:
               
chr21:49353026-49353193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
187-488
               

               
Cow position:
               
chr21:22194286-22193975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
189-416
               

               
Cow position:
               
chr21:10608629-10608400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
10, 199
               

               
Conread position:
               
189-460
               

               
Cow position:
               
chr21:9872794-9873055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
174, 54
               

               
Conread position:
               
192-478
               

               
Cow position:
               
chr21:712764-713056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
192-482
               

               
Cow position:
               
chr21:41198582-41198281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
193-456
               

               
Cow position:
               
chr21:21169664-21169400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
194-447
               

               
Cow position:
               
chr21:23311113-23310869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
194-478
               

               
Cow position:
               
chr21:10000912-10001189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
196-379
               

               
Cow position:
               
chr21:6765714-6765896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr21:28244310-28244588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 9
               

               
Conread position:
               
197-488
               

               
Cow position:
               
chr21:18065089-18064792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 167
               

               
Conread position:
               
198-456
               

               
Cow position:
               
chr21:10114493-10114238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
150, 88
               

               
Conread position:
               
201-475
               

               
Cow position:
               
chr21:13714005-13713729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 112
               

               
Conread position:
               
201-482
               

               
Cow position:
               
chr21:27624551-27624816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
203-482
               

               
Cow position:
               
chr21:41590716-41590447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
200, 71
               

               
Conread position:
               
204-426
               

               
Cow position:
               
chr21:47009399-47009173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
204-482
               

               
Cow position:
               
chr21:13840164-13840445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
205-482
               

               
Cow position:
               
chr21:18800686-18800416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
253, 110
               

               
Conread position:
               
206-367
               

               
Cow position:
               
chr21:31511137-31511290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
206-480
               

               
Cow position:
               
chr21:45921215-45920942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
209-480
               

               
Cow position:
               
chr21:6910037-6909760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 194
               

               
Conread position:
               
209-482
               

               
Cow position:
               
chr21:24642365-24642638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr21:41455103-41454854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
210-482
               

               
Cow position:
               
chr21:10633793-10633522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 254
               

               
Conread position:
               
211-481
               

               
Cow position:
               
chr21:46607735-46607473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr21:30222196-30222463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr21:18041989-18041747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
219-379
               

               
Cow position:
               
chr21:7825319-7825161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
219-480
               

               
Cow position:
               
chr21:42007603-42007346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
219-482
               

               
Cow position:
               
chr21:35354394-35354649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
221-487
               

               
Cow position:
               
chr21:29978903-29978637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
221-488
               

               
Cow position:
               
chr21:957526-957794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
222-368
               

               
Cow position:
               
chr21:48234299-48234155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
222-460
               

               
Cow position:
               
chr21:19673674-19673902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
222-482
               

               
Cow position:
               
chr21:11250725-11250987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 179
               

               
Conread position:
               
224-390
               

               
Cow position:
               
chr21:12640195-12640364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
224-453
               

               
Cow position:
               
chr21:2293854-2294072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
224-482
               

               
Cow position:
               
chr21:11359899-11360154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
224-482
               

               
Cow position:
               
chr21:12462109-12461849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
227-440
               

               
Cow position:
               
chr21:39809764-39809970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
227-452
               

               
Cow position:
               
chr21:34736895-34737118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
228-470
               

               
Cow position:
               
chr21:27668878-27669119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
230-451
               

               
Cow position:
               
chr21:42131738-42131507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 206
               

               
Conread position:
               
231-482
               

               
Cow position:
               
chr21:10538394-10538137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
231-482
               

               
Cow position:
               
chr21:20418821-20418564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
232-482
               

               
Cow position:
               
chr21:34151450-34151703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 234
               

               
Conread position:
               
233-480
               

               
Cow position:
               
chr21:20260450-20260203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
166, 82
               

               
Conread position:
               
233-482
               

               
Cow position:
               
chr21:17856414-17856662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
234-460
               

               
Cow position:
               
chr21:12301632-12301415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
234-482
               

               
Cow position:
               
chr21:20192774-20193012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
168, 46
               

               
Conread position:
               
235-482
               

               
Cow position:
               
chr21:46911-47158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
235-482
               

               
Cow position:
               
chr21:20152820-20153074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
236-403
               

               
Cow position:
               
chr21:27810278-27810448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
237-381
               

               
Cow position:
               
chr21:949794-949657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr21:18414926-18415168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 183
               

               
Conread position:
               
240-482
               

               
Cow position:
               
chr21:30835251-30835481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
240-482
               

               
Cow position:
               
chr21:36789671-36789913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
243-478
               

               
Cow position:
               
chr21:2260473-2260251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
243-482
               

               
Cow position:
               
chr21:18155693-18155448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
245-471
               

               
Cow position:
               
chr21:40168752-40168518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
245-482
               

               
Cow position:
               
chr21:46552217-46551985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
247-482
               

               
Cow position:
               
chr21:25629027-25628792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
250-457
               

               
Cow position:
               
chr21:34722897-34722695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
252-389
               

               
Cow position:
               
chr21:46469859-46469996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
252-487
               

               
Cow position:
               
chr21:23980292-23980059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
253-459
               

               
Cow position:
               
chr21:9980073-9979875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
254-480
               

               
Cow position:
               
chr21:22465089-22465307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
254-482
               

               
Cow position:
               
chr21:10410108-10410340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 223
               

               
Conread position:
               
254-482
               

               
Cow position:
               
chr21:10673023-10673239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-481
               

               
Cow position:
               
chr21:10561692-10561466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr21:29224966-29224773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
259-460
               

               
Cow position:
               
chr21:30236920-30236728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
260-482
               

               
Cow position:
               
chr21:9698189-9697962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
262-478
               

               
Cow position:
               
chr21:6017516-6017739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
263-480
               

               
Cow position:
               
chr21:37790101-37789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
264-482
               

               
Cow position:
               
chr21:24343363-24343149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
264-482
               

               
Cow position:
               
chr21:45262910-45262692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
265-460
               

               
Cow position:
               
chr21:5985415-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr21:17008884-17009099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr21:38664541-38664757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
265-482
               

               
Cow position:
               
chr21:42022193-42022393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
265-488
               

               
Cow position:
               
chr21:22210343-22210124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
266-480
               

               
Cow position:
               
chr21:33360130-33359925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
267-480
               

               
Cow position:
               
chr21:41107857-41107652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
268-468
               

               
Cow position:
               
chr21:8527571-8527380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
268-482
               

               
Cow position:
               
chr21:22121428-22121623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
270-488
               

               
Cow position:
               
chr21:6997846-6998069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
274-482
               

               
Cow position:
               
chr21:11198237-11198030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
158, 136
               

               
Conread position:
               
274-482
               

               
Cow position:
               
chr21:21686330-21686535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
276-482
               

               
Cow position:
               
chr21:9036209-9036419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
277-478
               

               
Cow position:
               
chr21:13495455-13495657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
282-480
               

               
Cow position:
               
chr21:30256349-30256153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
282-482
               

               
Cow position:
               
chr21:16152351-16152559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
282-482
               

               
Cow position:
               
chr21:40432368-40432563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
282-483
               

               
Cow position:
               
chr21:37014483-37014287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr21:46140964-46141166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr21:47714084-47713890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
286-480
               

               
Cow position:
               
chr21:44214048-44214242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
286-482
               

               
Cow position:
               
chr21:36909858-36910049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
286-488
               

               
Cow position:
               
chr21:16569825-16570023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr21:33414158-33413970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
290-456
               

               
Cow position:
               
chr21:1511219-1511385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr21:40266049-40266239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
294-459
               

               
Cow position:
               
chr21:19210646-19210809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
295-482
               

               
Cow position:
               
chr21:7394314-7394498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 93
               

               
Conread position:
               
295-482
               

               
Cow position:
               
chr21:17929909-17929719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
298-482
               

               
Cow position:
               
chr21:41140782-41140600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
299-488
               

               
Cow position:
               
chr21:297689-297876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
300-464
               

               
Cow position:
               
chr21:15544280-15544126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
300-481
               

               
Cow position:
               
chr21:11779592-11779424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
302-460
               

               
Cow position:
               
chr21:36910679-36910833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
307-454
               

               
Cow position:
               
chr21:9302483-9302337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
307-455
               

               
Cow position:
               
chr21:46463465-46463614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
307-482
               

               
Cow position:
               
chr21:22014130-22014308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
309-427
               

               
Cow position:
               
chr21:14228624-14228504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
309-434
               

               
Cow position:
               
chr21:7391330-7391207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
309-458
               

               
Cow position:
               
chr21:22720173-22720322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
309-481
               

               
Cow position:
               
chr21:5464693-5464865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr21:868979-868806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr21:977198-977030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr21:17890249-17890420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
309-482
               

               
Cow position:
               
chr21:47363792-47363616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
310-482
               

               
Cow position:
               
chr21:7377982-7377808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
310-488
               

               
Cow position:
               
chr21:21907482-21907312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
311-481
               

               
Cow position:
               
chr21:28919576-28919406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
315-482
               

               
Cow position:
               
chr21:19060135-19059975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
316-477
               

               
Cow position:
               
chr21:19513818-19513978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 83
               

               
Conread position:
               
317-452
               

               
Cow position:
               
chr21:5612063-5612198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
323-482
               

               
Cow position:
               
chr21:471637-471794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
324-477
               

               
Cow position:
               
chr21:40192341-40192191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
329-461
               

               
Cow position:
               
chr21:34727274-34727138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
329-481
               

               
Cow position:
               
chr21:734562-734707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
329-482
               

               
Cow position:
               
chr21:42209665-42209511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
337-482
               

               
Cow position:
               
chr21:38720226-38720368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               
Show alignments to all cow chromosomes.