Cow genome map

Conread name: rsin14_d13.y1

Conread position: 1-463
Cow position: chr25:12755914-12755454 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 2-482
Cow position: chr25:20786010-20785534 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 25-482
Cow position: chr25:20076095-20076549 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 55

Conread position: 30-228
Cow position: chr25:30267970-30268168 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 30-384
Cow position: chr25:394958-395308 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 117

Conread position: 30-469
Cow position: chr25:8576300-8576733 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 30-471
Cow position: chr25:20496142-20496573 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 30-480
Cow position: chr25:20394808-20395241 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 153

Conread position: 30-487
Cow position: chr25:1837844-1838298 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 121

Conread position: 31-414
Cow position: chr25:18448437-18448825 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 135

Conread position: 31-434
Cow position: chr25:14225194-14224799 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 31-459
Cow position: chr25:9396057-9396475 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 150

Conread position: 31-460
Cow position: chr25:6891925-6891505 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 241

Conread position: 31-471
Cow position: chr25:1735708-1735279 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 131

Conread position: 31-482
Cow position: chr25:9349656-9349231 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 225

Conread position: 32-384
Cow position: chr25:13333029-13333380 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 32-481
Cow position: chr25:20007724-20008184 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 250

Conread position: 33-400
Cow position: chr25:26757036-26757408 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 113, 221

Conread position: 38-360
Cow position: chr25:2110693-2111008 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 35

Conread position: 38-363
Cow position: chr25:40657910-40658236 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 22

Conread position: 38-372
Cow position: chr25:20060418-20060084 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-382
Cow position: chr25:14954416-14954068 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 64

Conread position: 38-390
Cow position: chr25:2135973-2136315 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 84

Conread position: 38-403
Cow position: chr25:27504561-27504204 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 159, 9

Conread position: 38-465
Cow position: chr25:24136834-24136401 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 175

Conread position: 38-477
Cow position: chr25:6464418-6463982 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-479
Cow position: chr25:11666278-11666697 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-480
Cow position: chr25:11662206-11661768 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 119

Conread position: 38-482
Cow position: chr25:22530898-22531333 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 38-483
Cow position: chr25:18294705-18294261 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 39-226
Cow position: chr25:13736794-13736588 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 39-327
Cow position: chr25:11956437-11956728 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 159

Conread position: 39-372
Cow position: chr25:18490687-18491018 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 12

Conread position: 39-376
Cow position: chr25:35608116-35607775 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 39-381
Cow position: chr25:17598882-17598537 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 63

Conread position: 39-381
Cow position: chr25:34013142-34012799 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 8

Conread position: 39-385
Cow position: chr25:24727175-24726825 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 64

Conread position: 39-406
Cow position: chr25:41366549-41366192 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 106

Conread position: 39-434
Cow position: chr25:787883-788268 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 39-440
Cow position: chr25:5514620-5515024 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 109

Conread position: 39-440
Cow position: chr25:12824419-12824007 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 243

Conread position: 39-449
Cow position: chr25:5792192-5791781 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 75

Conread position: 39-456
Cow position: chr25:20069337-20069747 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 39-458
Cow position: chr25:26654518-26654939 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 64

Conread position: 39-458
Cow position: chr25:36779106-36779529 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 154

Conread position: 39-460
Cow position: chr25:17658225-17658641 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 154

Conread position: 39-460
Cow position: chr25:25827071-25827501 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 39-465
Cow position: chr25:7800746-7801176 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 281

Conread position: 39-469
Cow position: chr25:31733122-31732695 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 83

Conread position: 39-474
Cow position: chr25:8120387-8120827 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 154

Conread position: 39-476
Cow position: chr25:21193333-21192884 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 153

Conread position: 39-478
Cow position: chr25:2046941-2046512 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 39-479
Cow position: chr25:13569557-13569127 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 242

Conread position: 39-480
Cow position: chr25:4522207-4521791 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 153

Conread position: 39-480
Cow position: chr25:16866847-16867288 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 79

Conread position: 39-480
Cow position: chr25:21191100-21191539 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 113

Conread position: 39-480
Cow position: chr25:23829505-23829079 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 39-480
Cow position: chr25:26238483-26238912 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 17

Conread position: 39-480
Cow position: chr25:35347515-35347953 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 21

Conread position: 39-481
Cow position: chr25:36746836-36746397 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 39-482
Cow position: chr25:7216432-7216876 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 280

Conread position: 39-482
Cow position: chr25:10504729-10504289 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 78

Conread position: 39-482
Cow position: chr25:11437192-11436755 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 256

Conread position: 39-482
Cow position: chr25:16922183-16921745 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 144

Conread position: 39-482
Cow position: chr25:21950737-21951182 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 313

Conread position: 39-482
Cow position: chr25:25754385-25753944 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 127

Conread position: 39-482
Cow position: chr25:26087125-26087571 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 39-482
Cow position: chr25:27868420-27868862 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 39-482
Cow position: chr25:30319839-30319402 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 354

Conread position: 39-484
Cow position: chr25:15319540-15319972 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 39-488
Cow position: chr25:11585123-11585574 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 70

Conread position: 39-488
Cow position: chr25:18564102-18564542 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 237

Conread position: 40-337
Cow position: chr25:8231271-8230973 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 162

Conread position: 40-346
Cow position: chr25:18323742-18323431 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-363
Cow position: chr25:38972445-38972770 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 49

Conread position: 40-367
Cow position: chr25:18885869-18885544 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-374
Cow position: chr25:35446557-35446883 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 62

Conread position: 40-377
Cow position: chr25:8572259-8571917 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 62

Conread position: 40-381
Cow position: chr25:6740432-6740768 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 32

Conread position: 40-381
Cow position: chr25:25510506-25510849 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 62

Conread position: 40-381
Cow position: chr25:28863486-28863832 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chr25:34502070-34501729 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 40-381
Cow position: chr25:34659493-34659148 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chr25:35567273-35566929 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 40-381
Cow position: chr25:36765684-36765346 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 40-452
Cow position: chr25:11054541-11054926 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 89

Conread position: 40-461
Cow position: chr25:13787562-13787985 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-461
Cow position: chr25:24654558-24654127 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 20, 352

Conread position: 40-482
Cow position: chr25:3145457-3145896 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 181

Conread position: 40-482
Cow position: chr25:6226662-6227087 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 40-482
Cow position: chr25:10643696-10643257 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 36

Conread position: 41-463
Cow position: chr25:12204081-12204508 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 242

Conread position: 45-440
Cow position: chr25:23389656-23389268 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 46-454
Cow position: chr25:37448056-37448458 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 266
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 84

Conread position: 46-481
Cow position: chr25:14791373-14791805 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 106

Conread position: 46-482
Cow position: chr25:32191286-32191712 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 173

Conread position: 49-470
Cow position: chr25:18000906-18000489 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 109, 154

Conread position: 49-482
Cow position: chr25:36761737-36762157 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 50-460
Cow position: chr25:12239513-12239117 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 11

Conread position: 50-482
Cow position: chr25:41363518-41363098 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 289
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 10, 85

Conread position: 51-455
Cow position: chr25:2498884-2499297 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 54

Conread position: 52-381
Cow position: chr25:16136780-16137125 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 49

Conread position: 52-481
Cow position: chr25:4897721-4898149 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 350

Conread position: 53-482
Cow position: chr25:20020343-20019951 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 53-483
Cow position: chr25:14834043-14833614 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 70

Conread position: 59-482
Cow position: chr25:8225715-8226155 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 267

Conread position: 61-377
Cow position: chr25:27621716-27622037 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 10

Conread position: 62-385
Cow position: chr25:41351567-41351249 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 173, 8

Conread position: 62-482
Cow position: chr25:33959625-33959200 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 59

Conread position: 63-480
Cow position: chr25:40957351-40956934 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 129

Conread position: 66-478
Cow position: chr25:40321655-40321240 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 67-482
Cow position: chr25:18721458-18721068 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 41

Conread position: 71-471
Cow position: chr25:18293414-18293794 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 266, 84

Conread position: 71-482
Cow position: chr25:5847152-5846757 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 71-483
Cow position: chr25:9055848-9056232 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 89

Conread position: 72-482
Cow position: chr25:16064542-16064944 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 66

Conread position: 73-435
Cow position: chr25:10137751-10138099 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 79

Conread position: 74-488
Cow position: chr25:23351042-23351453 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 41

Conread position: 76-456
Cow position: chr25:38981755-38982124 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 122

Conread position: 80-480
Cow position: chr25:33664242-33663855 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 28

Conread position: 86-482
Cow position: chr25:21245948-21245552 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 110

Conread position: 87-452
Cow position: chr25:17354038-17354389 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 177

Conread position: 93-385
Cow position: chr25:41392999-41392703 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 221

Conread position: 93-478
Cow position: chr25:9957369-9956990 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 164

Conread position: 97-460
Cow position: chr25:27821079-27821446 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 309

Conread position: 97-483
Cow position: chr25:36037121-36036726 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 222

Conread position: 102-487
Cow position: chr25:6886294-6885914 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 53

Conread position: 105-390
Cow position: chr25:6424904-6424626 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 32

Conread position: 108-482
Cow position: chr25:12097523-12097892 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 48

Conread position: 109-482
Cow position: chr25:23053238-23053609 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 12

Conread position: 110-350
Cow position: chr25:22910165-22909922 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 102

Conread position: 110-377
Cow position: chr25:9743907-9744179 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 51

Conread position: 113-482
Cow position: chr25:25051699-25051326 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 177

Conread position: 115-482
Cow position: chr25:22241693-22242015 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 201, 12

Conread position: 120-367
Cow position: chr25:16039147-16038898 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 145, 124

Conread position: 121-381
Cow position: chr25:23407151-23406885 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 51

Conread position: 134-419
Cow position: chr25:8347215-8347500 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 134

Conread position: 134-435
Cow position: chr25:41364273-41363977 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 251, 129

Conread position: 134-463
Cow position: chr25:448639-448309 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 319, 310

Conread position: 134-480
Cow position: chr25:19129572-19129905 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 36

Conread position: 134-482
Cow position: chr25:6474394-6474035 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 136-482
Cow position: chr25:2194659-2194983 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 138-361
Cow position: chr25:24168189-24167969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 55

Conread position: 138-390
Cow position: chr25:10366042-10365791 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 39

Conread position: 138-477
Cow position: chr25:21895177-21894837 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 53

Conread position: 143-449
Cow position: chr25:41384367-41384061 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 169

Conread position: 144-488
Cow position: chr25:20348574-20348925 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 343

Conread position: 145-479
Cow position: chr25:20023682-20023337 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 172

Conread position: 149-474
Cow position: chr25:15433526-15433849 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 12

Conread position: 152-482
Cow position: chr25:12261170-12260837 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 70

Conread position: 153-480
Cow position: chr25:36081600-36081925 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 21

Conread position: 155-460
Cow position: chr25:36535705-36535403 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 37

Conread position: 155-482
Cow position: chr25:14512843-14513167 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 37

Conread position: 158-454
Cow position: chr25:22297289-22296997 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 99

Conread position: 159-482
Cow position: chr25:37594145-37594458 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 255, 117

Conread position: 160-367
Cow position: chr25:17702231-17702032 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 100

Conread position: 160-476
Cow position: chr25:22203958-22203643 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 207

Conread position: 160-480
Cow position: chr25:8512359-8512037 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 116, 32

Conread position: 160-480
Cow position: chr25:24406008-24405683 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 159

Conread position: 160-482
Cow position: chr25:12081583-12081270 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 160-482
Cow position: chr25:33978469-33978166 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 89

Conread position: 160-487
Cow position: chr25:11131317-11131641 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 40

Conread position: 161-358
Cow position: chr25:21266739-21266939 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 160
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 68, 158

Conread position: 161-427
Cow position: chr25:15412037-15411771 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 117, 226

Conread position: 161-429
Cow position: chr25:29215653-29215388 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 176, 31

Conread position: 161-480
Cow position: chr25:9754342-9754046 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 21, 38

Conread position: 161-480
Cow position: chr25:14196588-14196913 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 159

Conread position: 162-482
Cow position: chr25:24452434-24452109 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 30

Conread position: 162-488
Cow position: chr25:28188216-28187889 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 163-367
Cow position: chr25:17712269-17712475 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 118

Conread position: 163-455
Cow position: chr25:6003256-6002982 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 103, 148

Conread position: 163-469
Cow position: chr25:18130810-18131103 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 11

Conread position: 163-482
Cow position: chr25:26700775-26701079 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 164-384
Cow position: chr25:18075405-18075629 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 47

Conread position: 165-440
Cow position: chr25:26058322-26058595 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 118, 78

Conread position: 165-482
Cow position: chr25:17566324-17566639 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 105

Conread position: 166-440
Cow position: chr25:9961440-9961163 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 237

Conread position: 166-488
Cow position: chr25:5407488-5407798 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 217, 34

Conread position: 167-465
Cow position: chr25:35332912-35333193 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 63, 25

Conread position: 167-482
Cow position: chr25:19679081-19679407 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 152

Conread position: 167-482
Cow position: chr25:35612562-35612261 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 92

Conread position: 168-482
Cow position: chr25:18487414-18487720 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 141, 44

Conread position: 168-482
Cow position: chr25:31230483-31230190 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 242, 51

Conread position: 169-435
Cow position: chr25:8918537-8918271 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 153

Conread position: 169-440
Cow position: chr25:13642575-13642302 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 227

Conread position: 169-482
Cow position: chr25:7306039-7306344 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 169-488
Cow position: chr25:33550247-33550567 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 36

Conread position: 170-390
Cow position: chr25:16400507-16400301 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 6, 0

Conread position: 170-433
Cow position: chr25:16001779-16001522 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 170-481
Cow position: chr25:7581685-7581380 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 22

Conread position: 171-480
Cow position: chr25:15254588-15254298 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 174-390
Cow position: chr25:36026753-36026970 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 174-478
Cow position: chr25:38135493-38135798 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 95

Conread position: 175-435
Cow position: chr25:4002543-4002807 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 175-456
Cow position: chr25:14467335-14467063 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 17

Conread position: 176-482
Cow position: chr25:24669682-24669392 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 178-451
Cow position: chr25:20211336-20211059 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 77, 137

Conread position: 178-488
Cow position: chr25:12294001-12293691 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 136

Conread position: 182-370
Cow position: chr25:24008423-24008232 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 0

Conread position: 184-488
Cow position: chr25:18988132-18988446 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 306

Conread position: 186-460
Cow position: chr25:8560627-8560899 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 43

Conread position: 186-482
Cow position: chr25:41132597-41132308 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 275, 82

Conread position: 186-487
Cow position: chr25:22369151-22369442 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 166, 0

Conread position: 187-482
Cow position: chr25:21289099-21289398 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 204

Conread position: 187-488
Cow position: chr25:15377092-15377382 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 70

Conread position: 189-428
Cow position: chr25:7329305-7329547 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 131

Conread position: 190-482
Cow position: chr25:61419-61702 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 169

Conread position: 191-482
Cow position: chr25:12840955-12840666 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 227, 73

Conread position: 192-483
Cow position: chr25:23913153-23913438 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 62

Conread position: 193-409
Cow position: chr25:15286775-15286562 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 80, 90

Conread position: 193-482
Cow position: chr25:26338210-26338510 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 0

Conread position: 194-390
Cow position: chr25:6256172-6255975 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 41

Conread position: 198-449
Cow position: chr25:36033206-36033457 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 63, 90

Conread position: 198-456
Cow position: chr25:29312572-29312308 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 17

Conread position: 198-480
Cow position: chr25:6961380-6961103 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 45

Conread position: 198-480
Cow position: chr25:10218281-10217999 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 191

Conread position: 198-488
Cow position: chr25:38425135-38425417 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 201-460
Cow position: chr25:12319566-12319313 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 60

Conread position: 205-371
Cow position: chr25:2595954-2596128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 11, 119

Conread position: 208-475
Cow position: chr25:12899535-12899806 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 15

Conread position: 209-404
Cow position: chr25:18237536-18237735 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 104

Conread position: 210-483
Cow position: chr25:23324582-23324316 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 174

Conread position: 211-482
Cow position: chr25:26090029-26089761 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 12

Conread position: 211-482
Cow position: chr25:30462507-30462256 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 44

Conread position: 213-350
Cow position: chr25:16389507-16389369 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 214-479
Cow position: chr25:34768934-34768683 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 180, 67

Conread position: 219-444
Cow position: chr25:13736520-13736299 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 124

Conread position: 220-455
Cow position: chr25:26270142-26269912 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 125

Conread position: 221-482
Cow position: chr25:40905036-40904778 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 161

Conread position: 222-452
Cow position: chr25:36017334-36017564 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 175, 18

Conread position: 222-482
Cow position: chr25:13272363-13272621 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 46, 97

Conread position: 222-482
Cow position: chr25:16714480-16714217 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 60

Conread position: 223-480
Cow position: chr25:8157715-8157454 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 80

Conread position: 223-482
Cow position: chr25:17144227-17144480 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 168, 32

Conread position: 224-433
Cow position: chr25:12521166-12520961 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 94

Conread position: 224-447
Cow position: chr25:13294702-13294908 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 31

Conread position: 224-482
Cow position: chr25:17704545-17704796 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 46, 135

Conread position: 225-488
Cow position: chr25:20133518-20133258 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 35, 93

Conread position: 227-439
Cow position: chr25:14945643-14945441 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 31

Conread position: 227-480
Cow position: chr25:17914579-17914830 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 87, 174

Conread position: 227-482
Cow position: chr25:26137020-26136771 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 227-482
Cow position: chr25:27801089-27801330 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 63

Conread position: 229-482
Cow position: chr25:17342250-17342510 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 232-452
Cow position: chr25:21042191-21042408 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 162, 31

Conread position: 232-482
Cow position: chr25:25861556-25861298 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 89

Conread position: 235-390
Cow position: chr25:35110323-35110164 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 235-435
Cow position: chr25:3982851-3983045 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 65

Conread position: 235-479
Cow position: chr25:13672195-13672444 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 236-488
Cow position: chr25:26133846-26134099 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 245

Conread position: 239-482
Cow position: chr25:18905692-18905937 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 159

Conread position: 243-374
Cow position: chr25:11542725-11542859 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 70

Conread position: 243-440
Cow position: chr25:23323017-23323210 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 160

Conread position: 243-456
Cow position: chr25:18894908-18894693 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 76

Conread position: 243-482
Cow position: chr25:26259680-26259435 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 166

Conread position: 244-482
Cow position: chr25:17991768-17991535 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 22

Conread position: 245-482
Cow position: chr25:13443586-13443358 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 145, 21

Conread position: 246-428
Cow position: chr25:36138820-36138651 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 247-474
Cow position: chr25:23779495-23779286 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 19

Conread position: 248-480
Cow position: chr25:26457864-26457627 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 34

Conread position: 249-460
Cow position: chr25:15440958-15440756 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 5

Conread position: 251-378
Cow position: chr25:14931940-14931810 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 251-459
Cow position: chr25:11318833-11319031 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 130

Conread position: 252-452
Cow position: chr25:31704817-31705025 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 252-480
Cow position: chr25:23245185-23244952 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 63

Conread position: 254-482
Cow position: chr25:22751188-22750955 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 6, 66

Conread position: 255-427
Cow position: chr25:33267550-33267723 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 74

Conread position: 255-478
Cow position: chr25:27532846-27532623 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 202

Conread position: 257-449
Cow position: chr25:36124507-36124704 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 262-469
Cow position: chr25:24651618-24651414 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 124

Conread position: 263-482
Cow position: chr25:448332-448113 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 183, 124

Conread position: 263-482
Cow position: chr25:5920773-5920996 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 264-447
Cow position: chr25:6121931-6121752 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 131

Conread position: 264-482
Cow position: chr25:21893174-21893390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 128, 37

Conread position: 265-478
Cow position: chr25:6996619-6996832 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 185

Conread position: 265-482
Cow position: chr25:26679065-26679278 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 178, 50

Conread position: 268-482
Cow position: chr25:9002515-9002724 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 268-487
Cow position: chr25:8485655-8485433 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 130

Conread position: 269-482
Cow position: chr25:7380999-7380787 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 86

Conread position: 270-469
Cow position: chr25:31732492-31732297 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 168, 20

Conread position: 271-482
Cow position: chr25:6687793-6687997 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 104, 36

Conread position: 273-475
Cow position: chr25:21668091-21668294 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 123, 42

Conread position: 274-482
Cow position: chr25:8961620-8961822 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 114, 41

Conread position: 274-488
Cow position: chr25:20216679-20216890 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 275-488
Cow position: chr25:5474379-5474174 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 105

Conread position: 276-482
Cow position: chr25:30618914-30619115 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 278-482
Cow position: chr25:19317109-19317317 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 41, 20

Conread position: 282-440
Cow position: chr25:32588025-32587868 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 282-451
Cow position: chr25:22332616-22332784 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 124

Conread position: 285-470
Cow position: chr25:12997449-12997633 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 80

Conread position: 286-469
Cow position: chr25:34379245-34379066 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 15

Conread position: 286-482
Cow position: chr25:22730691-22730882 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 61

Conread position: 288-480
Cow position: chr25:11066288-11066093 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 293-480
Cow position: chr25:15634611-15634419 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 295-482
Cow position: chr25:7449675-7449852 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 295-488
Cow position: chr25:14157489-14157681 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 300-488
Cow position: chr25:18202054-18201873 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 101

Conread position: 308-464
Cow position: chr25:13640263-13640416 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 150, 96

Conread position: 308-482
Cow position: chr25:33457609-33457784 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 309-481
Cow position: chr25:19364181-19364008 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 88

Conread position: 309-482
Cow position: chr25:9843056-9843228 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 56

Conread position: 309-482
Cow position: chr25:24504617-24504449 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 45

Conread position: 309-482
Cow position: chr25:30816766-30816941 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 310-482
Cow position: chr25:17119626-17119794 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 312-482
Cow position: chr25:12252929-12252757 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 87, 142

Conread position: 312-482
Cow position: chr25:17474632-17474461 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 93

Conread position: 315-483
Cow position: chr25:13139706-13139878 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 50, 134

Conread position: 317-447
Cow position: chr25:7299330-7299196 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 317-480
Cow position: chr25:36555801-36555639 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 77, 71

Conread position: 317-482
Cow position: chr25:1824207-1824045 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 47

Conread position: 322-436
Cow position: chr25:12691790-12691672 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 325-481
Cow position: chr25:26642480-26642638 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 329-460
Cow position: chr25:30449942-30450075 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 342-482
Cow position: chr25:26051814-26051955 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.