Cow genome map

Conread name: rsin14_d13.y1

Conread position: 1-340
Cow position: chrX:40365197-40364849 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 54, 124

Conread position: 1-487
Cow position: chrX:41238772-41238269 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 35

Conread position: 16-431
Cow position: chrX:28157096-28157530 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 24-460
Cow position: chrX:2786921-2786497 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 24-482
Cow position: chrX:20945194-20945646 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 27-482
Cow position: chrX:30543655-30543203 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 156

Conread position: 28-465
Cow position: chrX:18999524-18999954 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 30-438
Cow position: chrX:2146948-2147383 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 397

Conread position: 30-440
Cow position: chrX:14974097-14973702 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 30-451
Cow position: chrX:40452582-40452168 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 30-467
Cow position: chrX:7718489-7718914 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 8

Conread position: 30-480
Cow position: chrX:630663-630230 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 57

Conread position: 30-480
Cow position: chrX:32309731-32310184 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 168

Conread position: 30-482
Cow position: chrX:1616420-1615962 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 8

Conread position: 30-482
Cow position: chrX:3154620-3154161 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 167

Conread position: 30-482
Cow position: chrX:26626052-26625590 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 31-359
Cow position: chrX:35937438-35937121 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 121

Conread position: 31-474
Cow position: chrX:28847245-28846820 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 31-480
Cow position: chrX:2300562-2301004 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 235

Conread position: 31-482
Cow position: chrX:11073574-11073110 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 31-482
Cow position: chrX:18695290-18694850 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 252

Conread position: 31-482
Cow position: chrX:38936330-38936781 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 164

Conread position: 31-487
Cow position: chrX:20801408-20801853 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 129

Conread position: 31-488
Cow position: chrX:31261000-31260529 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 292

Conread position: 32-358
Cow position: chrX:7806011-7806338 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 16

Conread position: 34-482
Cow position: chrX:16722170-16721725 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 24

Conread position: 35-409
Cow position: chrX:14819345-14819728 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 7, 53

Conread position: 38-399
Cow position: chrX:35609625-35609986 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 38-440
Cow position: chrX:3405718-3405326 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 271
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 65

Conread position: 38-451
Cow position: chrX:15139909-15139497 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 38-452
Cow position: chrX:5017768-5017360 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 38-455
Cow position: chrX:28105564-28105972 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 84

Conread position: 38-460
Cow position: chrX:1810520-1810101 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 9

Conread position: 38-460
Cow position: chrX:41122712-41123118 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 38-461
Cow position: chrX:41103427-41103854 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 63

Conread position: 38-464
Cow position: chrX:12309749-12309323 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 8

Conread position: 38-478
Cow position: chrX:47343931-47344373 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-480
Cow position: chrX:11844599-11844162 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 38-481
Cow position: chrX:41198725-41199185 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 7

Conread position: 38-482
Cow position: chrX:151536-151982 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 38-482
Cow position: chrX:9651407-9650943 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 130

Conread position: 38-482
Cow position: chrX:14599175-14599614 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-482
Cow position: chrX:26441140-26440704 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 9

Conread position: 38-482
Cow position: chrX:31729097-31729523 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 38-482
Cow position: chrX:31949292-31948854 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 61

Conread position: 38-482
Cow position: chrX:34238359-34238800 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 155

Conread position: 38-482
Cow position: chrX:34554374-34554804 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 38-482
Cow position: chrX:40827108-40826670 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 7

Conread position: 38-485
Cow position: chrX:6413684-6414128 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 198

Conread position: 38-487
Cow position: chrX:3654246-3654694 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 38-488
Cow position: chrX:20697964-20697524 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 7

Conread position: 39-340
Cow position: chrX:29915585-29915281 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 67, 62

Conread position: 39-350
Cow position: chrX:37072045-37072358 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 154

Conread position: 39-358
Cow position: chrX:1550590-1550913 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 67, 62

Conread position: 39-362
Cow position: chrX:11806377-11806051 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 76

Conread position: 39-363
Cow position: chrX:4123475-4123801 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 227

Conread position: 39-363
Cow position: chrX:24441606-24441279 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 13

Conread position: 39-379
Cow position: chrX:38967290-38967627 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 99

Conread position: 39-381
Cow position: chrX:1947082-1946730 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 17, 253

Conread position: 39-381
Cow position: chrX:30143644-30143299 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 39-382
Cow position: chrX:16289923-16289575 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 39-385
Cow position: chrX:35388268-35387917 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 282

Conread position: 39-390
Cow position: chrX:19019453-19019115 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 88

Conread position: 39-390
Cow position: chrX:42587790-42587438 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 211

Conread position: 39-397
Cow position: chrX:21665952-21665597 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 98

Conread position: 39-431
Cow position: chrX:41790798-41790413 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 45

Conread position: 39-435
Cow position: chrX:11581576-11581967 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 39-435
Cow position: chrX:41743552-41743948 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 154

Conread position: 39-438
Cow position: chrX:38439115-38439518 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 8

Conread position: 39-440
Cow position: chrX:12115680-12116086 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 39-440
Cow position: chrX:27442913-27442518 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 113

Conread position: 39-440
Cow position: chrX:47379828-47379428 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 217

Conread position: 39-446
Cow position: chrX:17497735-17498130 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 39-451
Cow position: chrX:8899664-8900077 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 339

Conread position: 39-452
Cow position: chrX:27516173-27516581 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 119

Conread position: 39-453
Cow position: chrX:42462109-42461692 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 282

Conread position: 39-454
Cow position: chrX:8796890-8797309 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 39-457
Cow position: chrX:34754553-34754136 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 318

Conread position: 39-458
Cow position: chrX:28133988-28134397 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 115

Conread position: 39-458
Cow position: chrX:42994253-42994670 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 201

Conread position: 39-459
Cow position: chrX:12249440-12249869 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 211

Conread position: 39-460
Cow position: chrX:21592925-21593346 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 39-461
Cow position: chrX:18244628-18245046 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 280
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 144

Conread position: 39-465
Cow position: chrX:1331572-1332003 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 39-477
Cow position: chrX:44192801-44192371 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 71

Conread position: 39-478
Cow position: chrX:38072128-38071689 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 104

Conread position: 39-479
Cow position: chrX:14884323-14883878 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 51

Conread position: 39-479
Cow position: chrX:24105266-24105702 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 39-480
Cow position: chrX:878731-878301 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 115

Conread position: 39-480
Cow position: chrX:11655717-11656160 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 283

Conread position: 39-480
Cow position: chrX:13648145-13647706 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 217

Conread position: 39-480
Cow position: chrX:34532170-34532599 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 144

Conread position: 39-480
Cow position: chrX:34564939-34565365 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 107

Conread position: 39-480
Cow position: chrX:38963750-38964187 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 116

Conread position: 39-480
Cow position: chrX:41879291-41878855 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 39-481
Cow position: chrX:23299595-23300038 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 20

Conread position: 39-481
Cow position: chrX:42171660-42171214 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 116

Conread position: 39-482
Cow position: chrX:161067-161493 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 171

Conread position: 39-482
Cow position: chrX:917731-917287 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 39-482
Cow position: chrX:1055754-1055300 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 164

Conread position: 39-482
Cow position: chrX:3130203-3130653 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 268

Conread position: 39-482
Cow position: chrX:4044219-4043786 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 167

Conread position: 39-482
Cow position: chrX:5118844-5118417 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 114

Conread position: 39-482
Cow position: chrX:5871952-5872398 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 115

Conread position: 39-482
Cow position: chrX:6543895-6544335 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 277

Conread position: 39-482
Cow position: chrX:7571542-7571986 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 233

Conread position: 39-482
Cow position: chrX:7695403-7695830 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 39-482
Cow position: chrX:9252535-9252082 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 121

Conread position: 39-482
Cow position: chrX:10831873-10831406 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 298

Conread position: 39-482
Cow position: chrX:12290376-12290800 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 83

Conread position: 39-482
Cow position: chrX:13785739-13785282 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 241

Conread position: 39-482
Cow position: chrX:13868336-13868783 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 113

Conread position: 39-482
Cow position: chrX:15007512-15007068 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 362

Conread position: 39-482
Cow position: chrX:20340250-20339811 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 8

Conread position: 39-482
Cow position: chrX:23583197-23583642 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 39-482
Cow position: chrX:25035747-25035301 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 39-482
Cow position: chrX:27705232-27705667 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 166

Conread position: 39-482
Cow position: chrX:28632838-28632404 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 39-482
Cow position: chrX:28866348-28865925 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 8

Conread position: 39-482
Cow position: chrX:31250031-31250469 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 39-482
Cow position: chrX:31489151-31489601 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 173

Conread position: 39-482
Cow position: chrX:34441808-34441373 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 39-482
Cow position: chrX:34502562-34503001 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 39-482
Cow position: chrX:35223941-35224377 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 154

Conread position: 39-482
Cow position: chrX:35268532-35268942 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 39-482
Cow position: chrX:37232050-37232488 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 109

Conread position: 39-482
Cow position: chrX:37489357-37489800 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 240

Conread position: 39-482
Cow position: chrX:39071322-39071775 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 290
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 212

Conread position: 39-482
Cow position: chrX:39558728-39558267 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 262

Conread position: 39-482
Cow position: chrX:40269115-40269573 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 289

Conread position: 39-482
Cow position: chrX:40481232-40480791 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 39-482
Cow position: chrX:44054443-44054883 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 114

Conread position: 39-482
Cow position: chrX:45113275-45113700 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 39-482
Cow position: chrX:45967800-45968229 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 226

Conread position: 39-482
Cow position: chrX:46532881-46532414 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 165

Conread position: 39-483
Cow position: chrX:27446330-27446768 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 39-483
Cow position: chrX:33855601-33855137 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 39-487
Cow position: chrX:11082975-11082536 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 39-487
Cow position: chrX:15147542-15147111 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 20

Conread position: 39-487
Cow position: chrX:17794634-17795067 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 113

Conread position: 39-487
Cow position: chrX:29289215-29289664 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 76

Conread position: 39-487
Cow position: chrX:34376593-34377028 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 39-488
Cow position: chrX:24424753-24424316 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 89

Conread position: 39-488
Cow position: chrX:34401637-34402085 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 39-488
Cow position: chrX:34663221-34662761 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 164

Conread position: 39-488
Cow position: chrX:38218357-38218799 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 113

Conread position: 39-488
Cow position: chrX:42247536-42247097 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 112

Conread position: 40-346
Cow position: chrX:11949853-11949546 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-350
Cow position: chrX:21227114-21227425 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 40-354
Cow position: chrX:7381964-7382288 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 77

Conread position: 40-358
Cow position: chrX:12179608-12179924 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-374
Cow position: chrX:30454982-30454643 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 16, 62

Conread position: 40-374
Cow position: chrX:41156951-41157290 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-378
Cow position: chrX:2478987-2478645 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-378
Cow position: chrX:5423426-5423083 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 272

Conread position: 40-378
Cow position: chrX:10428180-10428522 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 62

Conread position: 40-378
Cow position: chrX:23396246-23396581 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 62

Conread position: 40-378
Cow position: chrX:26531598-26531941 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 40-381
Cow position: chrX:16711594-16711940 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 20, 224

Conread position: 40-381
Cow position: chrX:18950105-18949759 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 62

Conread position: 40-381
Cow position: chrX:20878122-20877777 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 40-381
Cow position: chrX:23280647-23280989 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 61

Conread position: 40-381
Cow position: chrX:23386899-23386561 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 13, 62

Conread position: 40-381
Cow position: chrX:24587814-24587468 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chrX:30228470-30228127 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chrX:30823156-30823502 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chrX:35240504-35240848 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chrX:37133894-37133548 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-381
Cow position: chrX:40544970-40544622 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 40-382
Cow position: chrX:6655626-6655280 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 32

Conread position: 40-382
Cow position: chrX:27977189-27976844 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 62

Conread position: 40-456
Cow position: chrX:32743178-32743593 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 240

Conread position: 40-459
Cow position: chrX:21785408-21785832 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-461
Cow position: chrX:23122024-23122455 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-479
Cow position: chrX:24288273-24287855 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 114

Conread position: 40-480
Cow position: chrX:7054092-7053655 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 18

Conread position: 40-481
Cow position: chrX:15120248-15119815 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 230, 344

Conread position: 40-481
Cow position: chrX:21749818-21749382 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-481
Cow position: chrX:27095759-27096203 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-481
Cow position: chrX:31202480-31202924 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 62

Conread position: 40-482
Cow position: chrX:22812703-22813143 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 5

Conread position: 40-482
Cow position: chrX:38094885-38094439 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 40-483
Cow position: chrX:4633211-4632775 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 96

Conread position: 40-487
Cow position: chrX:11718138-11717697 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 40-488
Cow position: chrX:40035831-40035355 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 305

Conread position: 41-374
Cow position: chrX:32094809-32094471 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 41-381
Cow position: chrX:18078269-18077924 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 61

Conread position: 41-435
Cow position: chrX:45413011-45412627 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 68

Conread position: 41-480
Cow position: chrX:37843361-37843798 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 319

Conread position: 42-381
Cow position: chrX:4905347-4905005 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 60

Conread position: 42-381
Cow position: chrX:16703312-16703656 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 18, 60

Conread position: 43-456
Cow position: chrX:25232230-25232648 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 276

Conread position: 43-482
Cow position: chrX:19689858-19690296 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 54

Conread position: 44-464
Cow position: chrX:47211206-47210778 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 322

Conread position: 44-480
Cow position: chrX:32171238-32170810 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 205

Conread position: 45-201
Cow position: chrX:11583498-11583344 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 45-370
Cow position: chrX:45089082-45089420 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 91

Conread position: 45-445
Cow position: chrX:10306315-10306718 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 110

Conread position: 45-482
Cow position: chrX:42507999-42507567 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 107

Conread position: 46-482
Cow position: chrX:7277574-7277992 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 108

Conread position: 47-381
Cow position: chrX:9096314-9096651 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 49-324
Cow position: chrX:21795146-21795420 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 52-381
Cow position: chrX:22493660-22493993 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 49

Conread position: 52-384
Cow position: chrX:15485972-15485640 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 99

Conread position: 52-469
Cow position: chrX:25337832-25338256 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 52-482
Cow position: chrX:31436133-31436555 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 210

Conread position: 52-488
Cow position: chrX:10412332-10411901 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 9

Conread position: 55-482
Cow position: chrX:7645914-7646332 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 207

Conread position: 56-482
Cow position: chrX:34454331-34454738 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 50

Conread position: 57-384
Cow position: chrX:48287782-48287465 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 135

Conread position: 58-374
Cow position: chrX:44737332-44737011 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 127

Conread position: 58-384
Cow position: chrX:41403620-41403963 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 58-384
Cow position: chrX:41410168-41410511 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 58-478
Cow position: chrX:44396679-44397087 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 93

Conread position: 58-479
Cow position: chrX:47967259-47967685 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 105

Conread position: 58-482
Cow position: chrX:20887985-20887560 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 134

Conread position: 58-482
Cow position: chrX:31443161-31442748 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 60

Conread position: 58-482
Cow position: chrX:47481459-47481877 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 55

Conread position: 58-488
Cow position: chrX:40558017-40557594 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 197

Conread position: 59-369
Cow position: chrX:32584153-32583837 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 42

Conread position: 59-456
Cow position: chrX:36778065-36778463 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 311

Conread position: 59-481
Cow position: chrX:47054856-47054445 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 300
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 141, 92

Conread position: 59-482
Cow position: chrX:26492661-26493087 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 265

Conread position: 59-488
Cow position: chrX:23564137-23563706 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 333

Conread position: 60-381
Cow position: chrX:2425461-2425136 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 61-475
Cow position: chrX:43527164-43527582 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 350

Conread position: 61-482
Cow position: chrX:15545559-15545963 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 131

Conread position: 64-454
Cow position: chrX:48243787-48243413 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 0

Conread position: 64-482
Cow position: chrX:33639632-33640056 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 64-482
Cow position: chrX:38007103-38006689 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 255

Conread position: 65-474
Cow position: chrX:6234768-6234376 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 34

Conread position: 71-452
Cow position: chrX:35681007-35681393 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 185

Conread position: 74-482
Cow position: chrX:5638493-5638088 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 69

Conread position: 77-440
Cow position: chrX:14924678-14925039 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 143

Conread position: 78-478
Cow position: chrX:47873662-47873259 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 150

Conread position: 79-457
Cow position: chrX:9161268-9161636 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 113

Conread position: 82-456
Cow position: chrX:30162680-30163055 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 110

Conread position: 83-468
Cow position: chrX:28845528-28845901 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 111

Conread position: 86-464
Cow position: chrX:19188623-19188994 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 199

Conread position: 87-482
Cow position: chrX:7350990-7351378 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 64

Conread position: 90-440
Cow position: chrX:25237869-25238218 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 84

Conread position: 92-352
Cow position: chrX:23061147-23061398 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 97-482
Cow position: chrX:30133626-30133237 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 128

Conread position: 99-379
Cow position: chrX:33020186-33020463 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 99-460
Cow position: chrX:33466316-33466668 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 102-451
Cow position: chrX:19015145-19015487 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 151

Conread position: 105-481
Cow position: chrX:18194619-18194995 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 156, 277

Conread position: 105-481
Cow position: chrX:23451465-23451085 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 168, 281

Conread position: 105-482
Cow position: chrX:1176268-1175901 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 85

Conread position: 106-359
Cow position: chrX:22482982-22482727 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 212

Conread position: 108-460
Cow position: chrX:11746551-11746902 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 31

Conread position: 109-482
Cow position: chrX:46033009-46032646 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 82

Conread position: 110-426
Cow position: chrX:44835105-44834780 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 260

Conread position: 110-482
Cow position: chrX:4269356-4268983 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 111-478
Cow position: chrX:46723029-46722657 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 298

Conread position: 113-479
Cow position: chrX:48195327-48194957 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 264

Conread position: 113-482
Cow position: chrX:31294826-31294491 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 120-449
Cow position: chrX:20751985-20752303 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 120-478
Cow position: chrX:45404112-45403748 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 9

Conread position: 121-435
Cow position: chrX:9997609-9997300 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 23

Conread position: 121-453
Cow position: chrX:42874700-42875035 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 71

Conread position: 121-455
Cow position: chrX:30862021-30862370 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 13, 33

Conread position: 121-458
Cow position: chrX:37836311-37836643 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 121-480
Cow position: chrX:8730801-8731172 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 354

Conread position: 121-480
Cow position: chrX:8925428-8925778 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 121-482
Cow position: chrX:16762494-16762852 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 37

Conread position: 122-384
Cow position: chrX:30921908-30922170 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 105

Conread position: 122-456
Cow position: chrX:35413353-35413669 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 140

Conread position: 122-460
Cow position: chrX:12017998-12018351 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 135

Conread position: 122-469
Cow position: chrX:6675202-6674851 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 66

Conread position: 122-482
Cow position: chrX:9635456-9635110 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 124-460
Cow position: chrX:158044-157713 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 155, 62

Conread position: 124-464
Cow position: chrX:47191670-47191343 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 37

Conread position: 124-482
Cow position: chrX:2467605-2467965 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 40

Conread position: 126-482
Cow position: chrX:488217-488585 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 135, 66

Conread position: 127-444
Cow position: chrX:40647706-40648029 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 65

Conread position: 127-480
Cow position: chrX:7496973-7497322 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 63

Conread position: 128-480
Cow position: chrX:27509292-27508943 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 200

Conread position: 131-480
Cow position: chrX:27432186-27431839 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 17

Conread position: 134-367
Cow position: chrX:40183615-40183376 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 134-369
Cow position: chrX:10755946-10756173 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 78

Conread position: 134-451
Cow position: chrX:34270151-34270452 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 17

Conread position: 134-482
Cow position: chrX:17725713-17726056 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 58

Conread position: 135-400
Cow position: chrX:28579955-28580228 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 191

Conread position: 139-398
Cow position: chrX:42588930-42588670 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 192, 16

Conread position: 140-482
Cow position: chrX:17541705-17542041 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 52

Conread position: 140-482
Cow position: chrX:20151591-20151937 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 120

Conread position: 141-384
Cow position: chrX:32020380-32020135 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 145-477
Cow position: chrX:28878416-28878098 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 115

Conread position: 145-480
Cow position: chrX:25816150-25815822 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 115

Conread position: 145-482
Cow position: chrX:24366083-24365740 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 36

Conread position: 145-482
Cow position: chrX:41673849-41674185 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 7

Conread position: 147-442
Cow position: chrX:23497915-23497625 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 147-475
Cow position: chrX:678820-678481 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 158

Conread position: 152-482
Cow position: chrX:44873797-44873480 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 54, 20

Conread position: 153-367
Cow position: chrX:16541924-16541705 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 5, 41

Conread position: 153-384
Cow position: chrX:2648597-2648369 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 40

Conread position: 153-460
Cow position: chrX:41167210-41166903 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 9

Conread position: 153-488
Cow position: chrX:22821800-22822131 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 168

Conread position: 155-480
Cow position: chrX:45174600-45174929 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 97, 166

Conread position: 155-483
Cow position: chrX:20677121-20677448 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 25

Conread position: 156-369
Cow position: chrX:47042234-47042017 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 157-405
Cow position: chrX:35284375-35284626 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 104

Conread position: 158-456
Cow position: chrX:4768509-4768792 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 94

Conread position: 158-482
Cow position: chrX:27680162-27680479 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 34

Conread position: 159-482
Cow position: chrX:9360643-9360968 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 109, 84

Conread position: 160-362
Cow position: chrX:2206783-2206588 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 160-379
Cow position: chrX:25411601-25411820 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 32

Conread position: 160-383
Cow position: chrX:8682169-8681944 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 107, 81

Conread position: 160-409
Cow position: chrX:42282197-42282437 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 160-435
Cow position: chrX:30833077-30832818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 160-452
Cow position: chrX:23970150-23970432 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 32

Conread position: 160-456
Cow position: chrX:1514643-1514357 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 160-456
Cow position: chrX:29032178-29032470 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 176, 32

Conread position: 160-457
Cow position: chrX:9855061-9855354 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 204

Conread position: 160-457
Cow position: chrX:9953902-9954195 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 204

Conread position: 160-460
Cow position: chrX:11455291-11454983 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 31

Conread position: 160-460
Cow position: chrX:40692977-40692692 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 177, 76

Conread position: 160-464
Cow position: chrX:24132390-24132086 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 49

Conread position: 160-469
Cow position: chrX:6203316-6203609 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 158

Conread position: 160-469
Cow position: chrX:26876120-26875813 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 32

Conread position: 160-480
Cow position: chrX:9416932-9416605 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 155

Conread position: 160-480
Cow position: chrX:41884657-41884333 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 120, 159

Conread position: 160-481
Cow position: chrX:34543548-34543864 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 74

Conread position: 160-482
Cow position: chrX:619247-618921 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 159

Conread position: 160-482
Cow position: chrX:16416269-16416590 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 48

Conread position: 160-482
Cow position: chrX:21004445-21004765 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 32

Conread position: 160-482
Cow position: chrX:21672312-21672641 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 248

Conread position: 160-482
Cow position: chrX:23514257-23513936 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 56

Conread position: 160-482
Cow position: chrX:32419971-32420293 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 222

Conread position: 160-482
Cow position: chrX:44961508-44961832 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 129

Conread position: 160-482
Cow position: chrX:45598843-45598524 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 153

Conread position: 160-487
Cow position: chrX:17631041-17630717 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 32

Conread position: 160-487
Cow position: chrX:37119360-37119679 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 85

Conread position: 160-488
Cow position: chrX:27394253-27393941 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 161-454
Cow position: chrX:40788965-40789265 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 180

Conread position: 161-460
Cow position: chrX:24259816-24259522 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 232, 31

Conread position: 161-482
Cow position: chrX:42492748-42492442 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 21

Conread position: 161-487
Cow position: chrX:17888644-17888337 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 162-478
Cow position: chrX:40116188-40116491 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 39

Conread position: 162-482
Cow position: chrX:6690485-6690179 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 104

Conread position: 162-482
Cow position: chrX:17662834-17662517 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 157

Conread position: 163-435
Cow position: chrX:30421175-30420906 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 29

Conread position: 163-482
Cow position: chrX:15814861-15815165 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 163-483
Cow position: chrX:11589828-11589506 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 29

Conread position: 165-367
Cow position: chrX:877257-877061 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 165-479
Cow position: chrX:48010360-48010682 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 165-482
Cow position: chrX:11856195-11856511 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 47

Conread position: 165-483
Cow position: chrX:13382090-13382406 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 295

Conread position: 165-488
Cow position: chrX:30963106-30962792 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 107

Conread position: 166-397
Cow position: chrX:42339169-42338949 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 166-482
Cow position: chrX:12405602-12405300 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 147, 40

Conread position: 167-352
Cow position: chrX:6639892-6640082 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 167-370
Cow position: chrX:45566398-45566607 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 181

Conread position: 167-443
Cow position: chrX:47757161-47756886 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 179

Conread position: 167-482
Cow position: chrX:6278738-6278417 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 167-482
Cow position: chrX:9201315-9201629 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 30

Conread position: 167-482
Cow position: chrX:17231502-17231816 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 120

Conread position: 167-482
Cow position: chrX:36975717-36976032 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 189

Conread position: 167-483
Cow position: chrX:32623351-32623653 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 231, 10

Conread position: 167-488
Cow position: chrX:38549216-38549532 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 152

Conread position: 168-444
Cow position: chrX:15996923-15997206 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 227

Conread position: 168-460
Cow position: chrX:14900952-14900674 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 168-469
Cow position: chrX:32431396-32431692 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 39

Conread position: 168-481
Cow position: chrX:22624250-22624556 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 60

Conread position: 168-482
Cow position: chrX:37910222-37910526 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 14

Conread position: 169-434
Cow position: chrX:37048811-37048548 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 145

Conread position: 169-440
Cow position: chrX:35542661-35542934 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 150

Conread position: 169-482
Cow position: chrX:7161842-7162137 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 229, 36

Conread position: 169-482
Cow position: chrX:7721754-7722069 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 151

Conread position: 170-460
Cow position: chrX:39938746-39938464 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 17

Conread position: 170-468
Cow position: chrX:13265849-13265563 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 115

Conread position: 170-480
Cow position: chrX:21664952-21664641 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 106, 22

Conread position: 170-482
Cow position: chrX:10959631-10959314 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 7

Conread position: 171-460
Cow position: chrX:35925739-35926016 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 172-385
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 144, 94

Conread position: 172-459
Cow position: chrX:13245364-13245656 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 150

Conread position: 174-440
Cow position: chrX:29509669-29509399 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 231

Conread position: 174-452
Cow position: chrX:43049117-43049394 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 216

Conread position: 174-482
Cow position: chrX:21642703-21642401 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 174-482
Cow position: chrX:28013665-28013361 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 100

Conread position: 175-365
Cow position: chrX:16324187-16323998 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 13

Conread position: 175-397
Cow position: chrX:17042466-17042690 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 146

Conread position: 176-482
Cow position: chrX:6265809-6265518 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 240, 84

Conread position: 176-482
Cow position: chrX:6488363-6488657 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 86

Conread position: 177-450
Cow position: chrX:1503117-1503387 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 15

Conread position: 177-482
Cow position: chrX:12980053-12979753 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 142

Conread position: 177-482
Cow position: chrX:46073044-46072736 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 178-432
Cow position: chrX:45015364-45015607 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 83

Conread position: 178-482
Cow position: chrX:11633457-11633763 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 178-487
Cow position: chrX:23091660-23091955 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 137

Conread position: 179-482
Cow position: chrX:29602053-29601747 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 179-482
Cow position: chrX:37574636-37574921 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 0

Conread position: 179-488
Cow position: chrX:36283125-36283425 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 215

Conread position: 180-372
Cow position: chrX:10252401-10252209 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 37

Conread position: 181-482
Cow position: chrX:48236593-48236899 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 132

Conread position: 182-345
Cow position: chrX:25036918-25036750 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 182-444
Cow position: chrX:28836121-28835859 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 32

Conread position: 182-445
Cow position: chrX:28929625-28929886 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 204, 10

Conread position: 182-482
Cow position: chrX:29120841-29121128 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 183-458
Cow position: chrX:8070916-8070642 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 95, 18

Conread position: 183-485
Cow position: chrX:40567383-40567676 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 171

Conread position: 184-488
Cow position: chrX:39126123-39126411 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 185-435
Cow position: chrX:35969293-35969052 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 17

Conread position: 185-482
Cow position: chrX:34411625-34411927 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 121

Conread position: 187-482
Cow position: chrX:27174782-27175079 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 252

Conread position: 188-482
Cow position: chrX:29542430-29542136 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 127

Conread position: 188-488
Cow position: chrX:45993001-45993315 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 28, 141

Conread position: 190-440
Cow position: chrX:36723310-36723050 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 192-385
Cow position: chrX:46315588-46315392 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 78, 119

Conread position: 192-479
Cow position: chrX:3579737-3580022 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 171

Conread position: 192-482
Cow position: chrX:47046727-47046433 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 68, 207

Conread position: 193-482
Cow position: chrX:841952-842238 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 79

Conread position: 193-482
Cow position: chrX:16996300-16996573 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 223, 78

Conread position: 193-482
Cow position: chrX:46587611-46587903 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 196-435
Cow position: chrX:17908487-17908254 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 89

Conread position: 196-480
Cow position: chrX:29545083-29544798 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 54

Conread position: 198-480
Cow position: chrX:1499468-1499744 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 68

Conread position: 199-481
Cow position: chrX:43780053-43779767 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 211

Conread position: 199-482
Cow position: chrX:4515467-4515772 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 200-359
Cow position: chrX:45148975-45149140 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 200-440
Cow position: chrX:4091448-4091679 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 74

Conread position: 200-478
Cow position: chrX:47303079-47302800 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 113

Conread position: 201-479
Cow position: chrX:47301102-47300825 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 137

Conread position: 201-482
Cow position: chrX:43973360-43973626 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 191, 73

Conread position: 202-456
Cow position: chrX:36961438-36961696 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 209

Conread position: 202-482
Cow position: chrX:33000706-33000986 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 95

Conread position: 202-482
Cow position: chrX:37781315-37781028 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 112

Conread position: 202-482
Cow position: chrX:40809489-40809774 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 112, 0

Conread position: 204-478
Cow position: chrX:47484467-47484187 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 206

Conread position: 209-397
Cow position: chrX:8991697-8991882 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 209-431
Cow position: chrX:45874808-45875028 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 0

Conread position: 209-476
Cow position: chrX:23785463-23785722 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 160

Conread position: 209-482
Cow position: chrX:8869599-8869321 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 107

Conread position: 209-482
Cow position: chrX:31311835-31312110 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 110

Conread position: 209-482
Cow position: chrX:44657155-44656876 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 221

Conread position: 209-483
Cow position: chrX:37540934-37541199 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 105, 65

Conread position: 209-488
Cow position: chrX:43730405-43730139 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 210-374
Cow position: chrX:24149450-24149615 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 51, 107

Conread position: 210-384
Cow position: chrX:1505523-1505693 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 106, 24

Conread position: 211-482
Cow position: chrX:42235722-42235443 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 111

Conread position: 211-488
Cow position: chrX:10394284-10394017 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 32

Conread position: 213-412
Cow position: chrX:31256681-31256878 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 213-460
Cow position: chrX:48035241-48035484 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 110

Conread position: 215-482
Cow position: chrX:36067835-36068096 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 197, 53

Conread position: 216-478
Cow position: chrX:31252234-31252485 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 94

Conread position: 219-390
Cow position: chrX:7336646-7336818 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 146

Conread position: 219-477
Cow position: chrX:35822161-35822420 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 20

Conread position: 219-481
Cow position: chrX:32820849-32821108 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 7

Conread position: 220-483
Cow position: chrX:45098932-45099210 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 221-482
Cow position: chrX:36060973-36061241 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 222-482
Cow position: chrX:29680438-29680180 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 94

Conread position: 222-482
Cow position: chrX:47186498-47186243 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 135

Conread position: 223-459
Cow position: chrX:38999667-38999914 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 223-479
Cow position: chrX:47166061-47165808 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 20

Conread position: 224-440
Cow position: chrX:29563546-29563330 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 184, 109

Conread position: 224-482
Cow position: chrX:169701-169465 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 168, 57

Conread position: 226-440
Cow position: chrX:37750427-37750215 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 86

Conread position: 226-482
Cow position: chrX:46433309-46433572 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 188

Conread position: 227-379
Cow position: chrX:9770857-9770697 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 227-460
Cow position: chrX:46146733-46146502 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 111, 53

Conread position: 227-482
Cow position: chrX:35885902-35885646 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 87, 148

Conread position: 228-358
Cow position: chrX:41271379-41271249 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 230-479
Cow position: chrX:25208016-25207777 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 140

Conread position: 230-480
Cow position: chrX:4398956-4399205 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 89

Conread position: 230-481
Cow position: chrX:22921144-22921401 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 18

Conread position: 230-481
Cow position: chrX:34792480-34792231 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 60

Conread position: 230-482
Cow position: chrX:14955937-14955688 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 17

Conread position: 230-482
Cow position: chrX:37955668-37955928 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 158, 30

Conread position: 231-435
Cow position: chrX:14003813-14003612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 39, 82

Conread position: 231-463
Cow position: chrX:23666954-23667188 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 192

Conread position: 231-482
Cow position: chrX:22387416-22387169 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 175

Conread position: 231-482
Cow position: chrX:22465787-22466037 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 163, 39

Conread position: 232-482
Cow position: chrX:10128837-10129089 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 180

Conread position: 233-363
Cow position: chrX:27145457-27145586 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 233-482
Cow position: chrX:8917226-8917475 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 45, 154

Conread position: 234-460
Cow position: chrX:41992207-41991986 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 76, 21

Conread position: 234-480
Cow position: chrX:48385529-48385284 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 180

Conread position: 234-482
Cow position: chrX:30263087-30263339 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 212, 149

Conread position: 236-480
Cow position: chrX:41068564-41068804 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 22

Conread position: 236-482
Cow position: chrX:20584160-20584409 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 19

Conread position: 237-482
Cow position: chrX:22454252-22454017 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 20

Conread position: 239-377
Cow position: chrX:41764479-41764623 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 23

Conread position: 239-476
Cow position: chrX:25388395-25388161 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 78

Conread position: 241-456
Cow position: chrX:36355957-36356167 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 242-482
Cow position: chrX:27227966-27228207 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 156

Conread position: 245-482
Cow position: chrX:23561723-23561939 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 231, 13

Conread position: 250-480
Cow position: chrX:21986441-21986212 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 65

Conread position: 251-460
Cow position: chrX:18204612-18204408 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 137

Conread position: 251-482
Cow position: chrX:9365822-9365595 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 251-488
Cow position: chrX:39415518-39415285 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 67

Conread position: 254-482
Cow position: chrX:29723596-29723821 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 149

Conread position: 255-482
Cow position: chrX:11085201-11084982 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 118, 0

Conread position: 255-488
Cow position: chrX:27685103-27685334 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 109

Conread position: 259-430
Cow position: chrX:44754795-44754630 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 259-481
Cow position: chrX:19273863-19273627 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 30, 57

Conread position: 260-482
Cow position: chrX:11614560-11614774 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 139, 0

Conread position: 260-482
Cow position: chrX:21566263-21566488 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 217

Conread position: 263-480
Cow position: chrX:42873256-42873461 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 45, 30

Conread position: 263-480
Cow position: chrX:45976784-45977005 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 263-481
Cow position: chrX:41870937-41871147 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 52

Conread position: 263-482
Cow position: chrX:7710679-7710458 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 51, 142

Conread position: 264-481
Cow position: chrX:616397-616179 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 131, 51

Conread position: 264-482
Cow position: chrX:41027022-41027240 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 50

Conread position: 266-482
Cow position: chrX:6260292-6260068 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 189

Conread position: 266-482
Cow position: chrX:16055076-16055288 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 101

Conread position: 267-480
Cow position: chrX:42927951-42927745 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 268-482
Cow position: chrX:5919365-5919573 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 134, 48

Conread position: 268-482
Cow position: chrX:40685462-40685247 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 51

Conread position: 269-478
Cow position: chrX:45875261-45875469 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 126

Conread position: 270-482
Cow position: chrX:38728608-38728815 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 128

Conread position: 270-482
Cow position: chrX:48044641-48044434 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 274-483
Cow position: chrX:19003175-19003375 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 274-488
Cow position: chrX:34505172-34504963 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 35

Conread position: 275-487
Cow position: chrX:27946183-27945968 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 276-460
Cow position: chrX:20790798-20790972 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 277-482
Cow position: chrX:40320283-40320487 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 88

Conread position: 279-482
Cow position: chrX:4403194-4403398 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 73

Conread position: 280-482
Cow position: chrX:27119580-27119778 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 114, 71

Conread position: 282-481
Cow position: chrX:4296945-4296745 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 111

Conread position: 282-482
Cow position: chrX:5679683-5679491 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 282-488
Cow position: chrX:26881685-26881480 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 109, 33

Conread position: 282-488
Cow position: chrX:34315408-34315606 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 27

Conread position: 283-476
Cow position: chrX:23940141-23939964 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 285-450
Cow position: chrX:47209231-47209395 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 117

Conread position: 285-482
Cow position: chrX:24331664-24331857 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 286-421
Cow position: chrX:32747570-32747703 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 286-467
Cow position: chrX:38654543-38654364 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 115, 29

Conread position: 288-417
Cow position: chrX:10079560-10079431 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 27

Conread position: 288-468
Cow position: chrX:29194123-29194297 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 288-482
Cow position: chrX:4992127-4991932 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 71

Conread position: 291-482
Cow position: chrX:47657276-47657467 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 53

Conread position: 292-444
Cow position: chrX:35848454-35848607 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 55

Conread position: 295-482
Cow position: chrX:29937983-29938172 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 44

Conread position: 297-482
Cow position: chrX:21327801-21327994 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 298-456
Cow position: chrX:16348671-16348509 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 300-488
Cow position: chrX:10516157-10516338 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 15

Conread position: 301-482
Cow position: chrX:40283027-40283202 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 303-482
Cow position: chrX:12095870-12095691 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 139, 81

Conread position: 304-488
Cow position: chrX:31515073-31515259 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 59

Conread position: 306-482
Cow position: chrX:27261094-27261273 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 39

Conread position: 307-482
Cow position: chrX:33654934-33654763 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 307-482
Cow position: chrX:37129176-37129350 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 35

Conread position: 308-455
Cow position: chrX:48201204-48201348 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 309-445
Cow position: chrX:25283105-25282972 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 309-465
Cow position: chrX:29549638-29549481 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 309-482
Cow position: chrX:1572228-1572058 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 309-482
Cow position: chrX:20168467-20168639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 93

Conread position: 309-482
Cow position: chrX:29050156-29050328 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 150

Conread position: 309-482
Cow position: chrX:42855365-42855539 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 7

Conread position: 312-456
Cow position: chrX:20882025-20881884 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 312-482
Cow position: chrX:40680523-40680695 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 313-482
Cow position: chrX:23113191-23113366 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 37

Conread position: 315-482
Cow position: chrX:23562550-23562713 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 317-459
Cow position: chrX:36514977-36514835 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 320-482
Cow position: chrX:39220000-39220160 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 321-480
Cow position: chrX:36866092-36866252 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 86, 67

Conread position: 322-480
Cow position: chrX:4153113-4152952 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 63

Conread position: 323-480
Cow position: chrX:13136309-13136153 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 328-482
Cow position: chrX:22915108-22914959 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 331-460
Cow position: chrX:17301378-17301247 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 337-487
Cow position: chrX:25036924-25037073 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 76

Conread position: 340-482
Cow position: chrX:27511367-27511509 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 61

Conread position: 351-480
Cow position: chrX:19943286-19943155 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.