Cow genome map
Conread name: | rsin14_g1.y1 |
Conread position: | 1-315 |
Cow position: | chr1:44087673-44087368 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 213 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 14, 46 |
Conread position: | 1-347 |
Cow position: | chr1:40906684-40907030 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 231 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 14, 131 |
Conread position: | 1-495 |
Cow position: | chr1:53197824-53198322 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 313 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 19, 73 |
Conread position: | 1-521 |
Cow position: | chr1:18245320-18244798 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 64 |
Conread position: | 1-521 |
Cow position: | chr1:79637877-79637354 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 46 |
Conread position: | 3-181 |
Cow position: | chr1:67900920-67900740 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 130 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 12, 108 |
Conread position: | 3-331 |
Cow position: | chr1:89478106-89478436 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 230 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 17, 290 |
Conread position: | 3-495 |
Cow position: | chr1:52173444-52172941 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 44 |
Conread position: | 3-505 |
Cow position: | chr1:89771820-89771323 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 319 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 16, 49 |
Conread position: | 3-521 |
Cow position: | chr1:67285571-67286095 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 70 |
Conread position: | 4-510 |
Cow position: | chr1:77122488-77122004 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 130 |
Conread position: | 12-303 |
Cow position: | chr1:87460472-87460194 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 196 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 24, 134 |
Conread position: | 17-127 |
Cow position: | chr1:55324406-55324295 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 92 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 17-495 |
Cow position: | chr1:102548263-102548728 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 320 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 11, 31 |
Conread position: | 18-495 |
Cow position: | chr1:17037492-17037021 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 310 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 10, 52 |
Conread position: | 32-521 |
Cow position: | chr1:40514384-40513910 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 295, 110 |
Conread position: | 35-300 |
Cow position: | chr1:42057680-42057944 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 190 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 253, 0 |
Conread position: | 41-495 |
Cow position: | chr1:62924701-62925162 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 280 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 15, 233 |
Conread position: | 57-315 |
Cow position: | chr1:52322887-52323140 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 175 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 125, 49 |
Conread position: | 62-494 |
Cow position: | chr1:33894601-33895041 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 286 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 76, 34 |
Conread position: | 62-495 |
Cow position: | chr1:11293011-11292574 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 276 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 259, 201 |
Conread position: | 62-495 |
Cow position: | chr1:13449285-13449721 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 274 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 246, 201 |
Conread position: | 62-495 |
Cow position: | chr1:17013634-17013198 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 272 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 268, 199 |
Conread position: | 62-495 |
Cow position: | chr1:21086502-21086940 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 276 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 259, 200 |
Conread position: | 62-495 |
Cow position: | chr1:30284499-30284062 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 261 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 268, 201 |
Conread position: | 62-495 |
Cow position: | chr1:33850353-33850790 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 272 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 175, 171 |
Conread position: | 62-495 |
Cow position: | chr1:39542869-39543301 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 272 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 268, 201 |
Conread position: | 62-495 |
Cow position: | chr1:59211041-59210604 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 273 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 268, 201 |
Conread position: | 62-495 |
Cow position: | chr1:61308114-61308541 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 271 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 259, 139 |
Conread position: | 62-495 |
Cow position: | chr1:69764129-69764561 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 274 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 268, 107 |
Conread position: | 62-495 |
Cow position: | chr1:71563474-71563037 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 279 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 232, 130 |
Conread position: | 62-495 |
Cow position: | chr1:79921632-79921197 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 269 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 235, 200 |
Conread position: | 62-495 |
Cow position: | chr1:80360072-80359635 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 272 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 246, 201 |
Conread position: | 62-495 |
Cow position: | chr1:82651740-82652174 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 278 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 259, 200 |
Conread position: | 62-495 |
Cow position: | chr1:86549028-86548592 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 272 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 162, 151 |
Conread position: | 63-495 |
Cow position: | chr1:57655654-57656089 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 148 |
Conread position: | 63-495 |
Cow position: | chr1:91898106-91898539 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 268 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 267, 200 |
Conread position: | 66-495 |
Cow position: | chr1:67836026-67835594 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 278 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 267, 70 |
Conread position: | 72-488 |
Cow position: | chr1:31395534-31395954 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 258 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 258, 191 |
Conread position: | 72-488 |
Cow position: | chr1:40685585-40685162 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 268 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 107, 136 |
Conread position: | 72-489 |
Cow position: | chr1:20828020-20828435 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 253 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 258, 66 |
Conread position: | 72-494 |
Cow position: | chr1:55277364-55276950 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 261 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 191, 199 |
Conread position: | 72-495 |
Cow position: | chr1:18881281-18880854 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 263 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 169, 178 |
Conread position: | 72-495 |
Cow position: | chr1:30024088-30023660 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 254 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 236, 191 |
Conread position: | 72-495 |
Cow position: | chr1:43019231-43019662 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 267 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 171, 185 |
Conread position: | 72-495 |
Cow position: | chr1:58223415-58223831 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 268 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 242, 105 |
Conread position: | 72-495 |
Cow position: | chr1:68501125-68501554 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 258 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 185, 192 |
Conread position: | 72-495 |
Cow position: | chr1:87449056-87449483 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 256 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 236, 191 |
Conread position: | 72-495 |
Cow position: | chr1:89424695-89425121 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 259 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 250, 120 |
Conread position: | 72-495 |
Cow position: | chr1:91719535-91719108 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 269 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 225, 201 |
Conread position: | 72-495 |
Cow position: | chr1:97559820-97560249 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 265 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 9, 190 |
Conread position: | 74-488 |
Cow position: | chr1:82563621-82564038 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 254 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 219, 188 |
Conread position: | 109-495 |
Cow position: | chr1:88758705-88759096 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 238 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 199, 154 |
Conread position: | 125-495 |
Cow position: | chr1:56162491-56162861 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 237 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 125-521 |
Cow position: | chr1:89741046-89740640 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 276 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 198, 122 |
Conread position: | 138-521 |
Cow position: | chr1:53363905-53364285 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 161 |
Conread position: | 147-521 |
Cow position: | chr1:55324305-55323938 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 35 |
Conread position: | 183-495 |
Cow position: | chr1:40052573-40052889 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 203 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 195-489 |
Cow position: | chr1:89900414-89900123 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 204 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 15, 53 |
Conread position: | 195-520 |
Cow position: | chr1:101149121-101149441 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 13, 52 |
Conread position: | 207-488 |
Cow position: | chr1:13645022-13645299 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 193 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 5, 41 |
Conread position: | 207-488 |
Cow position: | chr1:69536217-69536493 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 189 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 158, 40 |
Conread position: | 207-520 |
Cow position: | chr1:45096880-45097193 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 221 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 167, 40 |
Conread position: | 207-520 |
Cow position: | chr1:87244084-87244396 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 208 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 162, 40 |
Conread position: | 209-488 |
Cow position: | chr1:28722102-28722378 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 192 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 160, 38 |
Conread position: | 209-489 |
Cow position: | chr1:28802127-28801845 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 190 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 160, 38 |
Conread position: | 209-489 |
Cow position: | chr1:42289707-42289986 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 160, 39 |
Conread position: | 209-489 |
Cow position: | chr1:59672369-59672647 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 186 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 101, 38 |
Conread position: | 209-489 |
Cow position: | chr1:88634676-88634956 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 188 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 160, 38 |
Conread position: | 209-489 |
Cow position: | chr1:101858682-101858402 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 188 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 160, 38 |
Conread position: | 211-520 |
Cow position: | chr1:33711347-33711658 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 214 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 97, 36 |
Conread position: | 223-489 |
Cow position: | chr1:3934854-3934587 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 186 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 85, 37 |
Conread position: | 224-489 |
Cow position: | chr1:63606495-63606226 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 185 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 36 |
Conread position: | 226-520 |
Cow position: | chr1:82919346-82919052 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 197 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 104, 21 |
Conread position: | 227-489 |
Cow position: | chr1:22000657-22000395 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 184 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 91, 33 |
Conread position: | 246-489 |
Cow position: | chr1:38414152-38414397 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 90, 8 |
Conread position: | 262-489 |
Cow position: | chr1:18406843-18406612 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 160 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 48, 43 |
Conread position: | 265-489 |
Cow position: | chr1:57367813-57367575 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 167 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 109 |
Conread position: | 285-521 |
Cow position: | chr1:11863930-11863688 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 164 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 312-511 |
Cow position: | chr1:72134812-72135015 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 322-512 |
Cow position: | chr1:76703961-76703767 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 138 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 326-520 |
Cow position: | chr1:62854420-62854222 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 149 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 329-489 |
Cow position: | chr1:31344978-31344815 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 40, 29 |
Conread position: | 329-520 |
Cow position: | chr1:52323294-52323488 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 330-489 |
Cow position: | chr1:52233682-52233519 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 337-511 |
Cow position: | chr1:34688759-34688932 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 31, 66 |
Conread position: | 368-521 |
Cow position: | chr1:37420539-37420388 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 27, 141 |
Conread position: | 381-521 |
Cow position: | chr1:40907567-40907709 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 19, 51 |
Show alignments to all cow chromosomes.