Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-492 |
| Cow position: | chr10:39780760-39780265 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 1-521 |
| Cow position: | chr10:38547128-38546611 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 1-521 |
| Cow position: | chr10:54126559-54127075 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 204 |
| Conread position: | 1-521 |
| Cow position: | chr10:61296382-61296915 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 323 |
| Conread position: | 12-447 |
| Cow position: | chr10:42735625-42736065 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 38-521 |
| Cow position: | chr10:42627600-42628083 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 17 |
| Conread position: | 62-486 |
| Cow position: | chr10:25566141-25565714 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 302, 200 |
| Conread position: | 62-495 |
| Cow position: | chr10:11686534-11686101 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 307, 80 |
| Conread position: | 62-495 |
| Cow position: | chr10:19497796-19497359 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 259, 201 |
| Conread position: | 62-495 |
| Cow position: | chr10:19839292-19839729 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr10:21401547-21401111 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 268, 130 |
| Conread position: | 62-495 |
| Cow position: | chr10:21741630-21741195 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 261, 86 |
| Conread position: | 62-495 |
| Cow position: | chr10:28640605-28641043 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 232, 210 |
| Conread position: | 62-495 |
| Cow position: | chr10:39818224-39817789 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 307, 121 |
| Conread position: | 62-495 |
| Cow position: | chr10:41156573-41157010 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr10:55092232-55092668 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-516 |
| Cow position: | chr10:14802960-14803414 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 211 |
| Conread position: | 72-489 |
| Cow position: | chr10:57560420-57559999 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 178 |
| Conread position: | 72-494 |
| Cow position: | chr10:41566239-41566661 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 338, 28 |
| Conread position: | 72-495 |
| Cow position: | chr10:4193086-4192659 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr10:41876050-41876477 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 261, 191 |
| Conread position: | 72-495 |
| Cow position: | chr10:51953476-51953048 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 106-495 |
| Cow position: | chr10:39178954-39179347 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 222, 157 |
| Conread position: | 195-488 |
| Cow position: | chr10:275899-276194 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 207-492 |
| Cow position: | chr10:40424985-40425276 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 207-519 |
| Cow position: | chr10:25497665-25497976 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 162, 25 |
| Conread position: | 207-520 |
| Cow position: | chr10:34685207-34685521 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 209-514 |
| Cow position: | chr10:31523160-31523472 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 225 |
| Conread position: | 209-520 |
| Cow position: | chr10:62777657-62777967 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 224-489 |
| Cow position: | chr10:7283363-7283098 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 224-489 |
| Cow position: | chr10:22100552-22100824 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 224-489 |
| Cow position: | chr10:37040402-37040671 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 226-488 |
| Cow position: | chr10:32650057-32650321 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 266-489 |
| Cow position: | chr10:37769176-37769407 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 103 |
| Conread position: | 276-520 |
| Cow position: | chr10:29633465-29633218 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 329-520 |
| Cow position: | chr10:62216032-62216228 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-521 |
| Cow position: | chr10:60489076-60489274 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 29 |
| Conread position: | 335-494 |
| Cow position: | chr10:24299428-24299267 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 335-521 |
| Cow position: | chr10:14951151-14951340 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 337-502 |
| Cow position: | chr10:14886412-14886247 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 53 |
Show alignments to all cow chromosomes.