Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 4-521 |
| Cow position: | chr13:34935645-34936175 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 292 |
| Conread position: | 17-495 |
| Cow position: | chr13:31735295-31734814 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 303 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 17-495 |
| Cow position: | chr13:32987256-32986784 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 17-495 |
| Cow position: | chr13:49972491-49972973 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 33-286 |
| Cow position: | chr13:54283470-54283720 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 62-495 |
| Cow position: | chr13:675788-676225 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 176, 172 |
| Conread position: | 62-495 |
| Cow position: | chr13:21841375-21840938 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr13:30245905-30245468 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 71-495 |
| Cow position: | chr13:2389965-2389538 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 259, 42 |
| Conread position: | 72-495 |
| Cow position: | chr13:3059396-3058977 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 222, 105 |
| Conread position: | 72-495 |
| Cow position: | chr13:4871910-4872336 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 222, 40 |
| Conread position: | 72-495 |
| Cow position: | chr13:17307321-17307743 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr13:53833602-53834030 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 99-495 |
| Cow position: | chr13:35029388-35029787 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 208, 163 |
| Conread position: | 123-448 |
| Cow position: | chr13:61951106-61951432 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 123-495 |
| Cow position: | chr13:2297908-2297533 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 207, 140 |
| Conread position: | 133-521 |
| Cow position: | chr13:20543422-20543051 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 23 |
| Conread position: | 195-490 |
| Cow position: | chr13:13046805-13046514 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 195-520 |
| Cow position: | chr13:33825742-33825412 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 207-489 |
| Cow position: | chr13:34143629-34143349 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-519 |
| Cow position: | chr13:62328564-62328255 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 207-520 |
| Cow position: | chr13:34692189-34692500 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 214-488 |
| Cow position: | chr13:33928505-33928237 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 263-486 |
| Cow position: | chr13:34043313-34043080 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 266-489 |
| Cow position: | chr13:1594103-1593870 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 329-520 |
| Cow position: | chr13:2909310-2909115 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-520 |
| Cow position: | chr13:3276287-3276484 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 337-495 |
| Cow position: | chr13:48356459-48356615 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 341-521 |
| Cow position: | chr13:34187554-34187370 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 373-520 |
| Cow position: | chr13:30657786-30657636 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 373-520 |
| Cow position: | chr13:31831786-31831936 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 373-520 |
| Cow position: | chr13:58716171-58716309 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 389-521 |
| Cow position: | chr13:54283773-54283908 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.