Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-231 |
| Cow position: | chr14:41771628-41771855 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 1-244 |
| Cow position: | chr14:35388740-35388494 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 1-521 |
| Cow position: | chr14:40338363-40338895 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 100 |
| Conread position: | 3-229 |
| Cow position: | chr14:45159493-45159717 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 178 |
| Conread position: | 3-462 |
| Cow position: | chr14:46433875-46434330 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 3-519 |
| Cow position: | chr14:50133590-50134095 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 4-521 |
| Cow position: | chr14:45304960-45304441 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 12-521 |
| Cow position: | chr14:46083315-46083821 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 17-495 |
| Cow position: | chr14:45030706-45030233 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 304 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 62-521 |
| Cow position: | chr14:9044180-9044644 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 72-495 |
| Cow position: | chr14:2282707-2283127 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 236, 71 |
| Conread position: | 72-495 |
| Cow position: | chr14:9678798-9678370 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 228, 191 |
| Conread position: | 72-495 |
| Cow position: | chr14:10561339-10561766 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr14:17240949-17241375 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 258, 146 |
| Conread position: | 72-495 |
| Cow position: | chr14:17492742-17492317 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 258, 144 |
| Conread position: | 72-495 |
| Cow position: | chr14:29049656-29049242 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 222, 128 |
| Conread position: | 72-495 |
| Cow position: | chr14:33395097-33394669 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 72-521 |
| Cow position: | chr14:16418832-16418377 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 123-489 |
| Cow position: | chr14:13272049-13272415 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 123-489 |
| Cow position: | chr14:41754666-41755034 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 151 |
| Conread position: | 128-514 |
| Cow position: | chr14:46463594-46463981 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 152-495 |
| Cow position: | chr14:30586149-30585802 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 167, 111 |
| Conread position: | 195-489 |
| Cow position: | chr14:45713085-45712795 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 203-414 |
| Cow position: | chr14:38533671-38533459 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 207-478 |
| Cow position: | chr14:41085900-41085630 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-489 |
| Cow position: | chr14:13661089-13660808 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 207-514 |
| Cow position: | chr14:7831627-7831325 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 207-520 |
| Cow position: | chr14:23691338-23691025 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-520 |
| Cow position: | chr14:42403775-42404088 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 103, 40 |
| Conread position: | 209-489 |
| Cow position: | chr14:47623464-47623761 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 209-521 |
| Cow position: | chr14:44550930-44551240 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 217-521 |
| Cow position: | chr14:35388244-35387944 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 220-489 |
| Cow position: | chr14:44129848-44130114 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 223-489 |
| Cow position: | chr14:13301922-13302189 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 227-489 |
| Cow position: | chr14:22032784-22032517 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 236-464 |
| Cow position: | chr14:50109496-50109725 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 249-489 |
| Cow position: | chr14:45766947-45767192 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 266-489 |
| Cow position: | chr14:11155224-11154992 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 335-521 |
| Cow position: | chr14:44856407-44856216 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 355-521 |
| Cow position: | chr14:44376450-44376620 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.