Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-184 |
| Cow position: | chr17:4080020-4080207 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 1-279 |
| Cow position: | chr17:15416181-15416462 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 115 |
| Conread position: | 4-264 |
| Cow position: | chr17:14327414-14327150 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 17-495 |
| Cow position: | chr17:15158058-15157586 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 27-493 |
| Cow position: | chr17:248623-249077 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 154, 18 |
| Conread position: | 27-521 |
| Cow position: | chr17:15370024-15370510 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 62-495 |
| Cow position: | chr17:180562-180989 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 302, 201 |
| Conread position: | 62-495 |
| Cow position: | chr17:6119079-6119516 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 259, 200 |
| Conread position: | 62-495 |
| Cow position: | chr17:8208039-8208475 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 268, 168 |
| Conread position: | 62-495 |
| Cow position: | chr17:15144431-15143995 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 259, 200 |
| Conread position: | 63-495 |
| Cow position: | chr17:2261052-2261486 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 247, 46 |
| Conread position: | 72-495 |
| Cow position: | chr17:1383874-1383446 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 221, 190 |
| Conread position: | 72-495 |
| Cow position: | chr17:9654512-9654084 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 228, 191 |
| Conread position: | 72-495 |
| Cow position: | chr17:14218083-14217660 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 236, 66 |
| Conread position: | 72-495 |
| Cow position: | chr17:22159853-22160281 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 236, 191 |
| Conread position: | 72-495 |
| Cow position: | chr17:43987465-43987885 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 258, 105 |
| Conread position: | 122-489 |
| Cow position: | chr17:4059135-4059490 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 242, 58 |
| Conread position: | 195-489 |
| Cow position: | chr17:18187102-18186809 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 195-489 |
| Cow position: | chr17:23857915-23857627 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 204-489 |
| Cow position: | chr17:1878640-1878935 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 126, 65 |
| Conread position: | 207-489 |
| Cow position: | chr17:55546-55267 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 124 |
| Conread position: | 207-489 |
| Cow position: | chr17:32025060-32024780 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 207-520 |
| Cow position: | chr17:455742-455432 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-520 |
| Cow position: | chr17:1284636-1284324 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 162, 10 |
| Conread position: | 209-489 |
| Cow position: | chr17:22430342-22430062 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 209-489 |
| Cow position: | chr17:44853785-44853506 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 209-492 |
| Cow position: | chr17:16889276-16889557 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 221-495 |
| Cow position: | chr17:1775409-1775138 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 224-489 |
| Cow position: | chr17:25736588-25736854 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 250-489 |
| Cow position: | chr17:1945344-1945584 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 152, 118 |
| Conread position: | 327-521 |
| Cow position: | chr17:35591476-35591669 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 329-501 |
| Cow position: | chr17:15417078-15417254 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-505 |
| Cow position: | chr17:20088640-20088466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 329-520 |
| Cow position: | chr17:2286618-2286813 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-520 |
| Cow position: | chr17:27345049-27345244 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.