Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 2-494 |
| Cow position: | chr18:54001576-54002072 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 309 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 3-300 |
| Cow position: | chr18:43199377-43199667 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 62-495 |
| Cow position: | chr18:19351517-19351950 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 87, 194 |
| Conread position: | 62-516 |
| Cow position: | chr18:11275939-11275491 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 268, 115 |
| Conread position: | 72-495 |
| Cow position: | chr18:16077854-16078278 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 249, 190 |
| Conread position: | 72-495 |
| Cow position: | chr18:55089778-55089351 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 78-521 |
| Cow position: | chr18:29235952-29236399 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 99-495 |
| Cow position: | chr18:51659599-51660000 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 209, 164 |
| Conread position: | 118-321 |
| Cow position: | chr18:33334870-33335072 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 195-489 |
| Cow position: | chr18:1520459-1520753 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 54 |
| Conread position: | 207-520 |
| Cow position: | chr18:2020571-2020260 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-520 |
| Cow position: | chr18:35334814-35335128 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 40 |
| Conread position: | 209-496 |
| Cow position: | chr18:33268207-33268491 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 211-520 |
| Cow position: | chr18:33358200-33358505 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 211-520 |
| Cow position: | chr18:43147590-43147285 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 214-488 |
| Cow position: | chr18:53784830-53785104 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 226-489 |
| Cow position: | chr18:23796989-23797251 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 227-487 |
| Cow position: | chr18:41841490-41841227 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 227-489 |
| Cow position: | chr18:37504405-37504666 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 233-521 |
| Cow position: | chr18:16660668-16660377 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 62 |
| Conread position: | 251-521 |
| Cow position: | chr18:54172711-54172443 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 258-489 |
| Cow position: | chr18:51257374-51257609 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 263-489 |
| Cow position: | chr18:40477513-40477745 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 297-489 |
| Cow position: | chr18:25349444-25349641 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 327-520 |
| Cow position: | chr18:17993308-17993114 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 328-511 |
| Cow position: | chr18:43200229-43200414 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 329-520 |
| Cow position: | chr18:30198109-30198304 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 329-520 |
| Cow position: | chr18:32293227-32293423 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 331-521 |
| Cow position: | chr18:33335304-33335498 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 344-489 |
| Cow position: | chr18:6869946-6869797 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 358-521 |
| Cow position: | chr18:54024902-54024735 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 373-489 |
| Cow position: | chr18:48221381-48221500 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 373-520 |
| Cow position: | chr18:39748080-39748230 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.