Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-494 |
| Cow position: | chr19:39687128-39687626 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 302 |
| Conread position: | 4-260 |
| Cow position: | chr19:27055143-27054885 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 48-321 |
| Cow position: | chr19:32224410-32224139 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 62-495 |
| Cow position: | chr19:771758-772189 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 253, 28 |
| Conread position: | 62-495 |
| Cow position: | chr19:52153103-52152666 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 279 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 72-495 |
| Cow position: | chr19:494879-495307 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 236, 191 |
| Conread position: | 72-495 |
| Cow position: | chr19:7341227-7341649 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 258, 203 |
| Conread position: | 72-495 |
| Cow position: | chr19:32192733-32193161 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 72-495 |
| Cow position: | chr19:43142870-43143296 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 128-495 |
| Cow position: | chr19:685055-685430 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 240 |
| Conread position: | 161-484 |
| Cow position: | chr19:37143-37469 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 195-489 |
| Cow position: | chr19:32238524-32238229 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 196-520 |
| Cow position: | chr19:801313-801639 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 53 |
| Conread position: | 204-489 |
| Cow position: | chr19:171529-171815 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 204-521 |
| Cow position: | chr19:33735-34051 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 207-448 |
| Cow position: | chr19:31340199-31340438 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 207-520 |
| Cow position: | chr19:4253025-4252713 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 162, 41 |
| Conread position: | 209-494 |
| Cow position: | chr19:32664889-32665176 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 211-520 |
| Cow position: | chr19:29208904-29209211 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 157, 34 |
| Conread position: | 218-489 |
| Cow position: | chr19:39389865-39390131 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 226-489 |
| Cow position: | chr19:7487403-7487665 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 249-520 |
| Cow position: | chr19:27053474-27053194 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 81, 238 |
| Conread position: | 252-484 |
| Cow position: | chr19:24748311-24748549 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 252-489 |
| Cow position: | chr19:30371425-30371662 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 201 |
| Conread position: | 263-521 |
| Cow position: | chr19:76860-76606 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 320-521 |
| Cow position: | chr19:39546105-39546305 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 329-520 |
| Cow position: | chr19:1031568-1031765 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 341-489 |
| Cow position: | chr19:33872696-33872848 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 344-505 |
| Cow position: | chr19:416121-416287 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 356-510 |
| Cow position: | chr19:562241-562083 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.