Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-166 |
| Cow position: | chr22:34695560-34695725 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 1-232 |
| Cow position: | chr22:1285900-1285668 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 1-267 |
| Cow position: | chr22:17072874-17073142 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-430 |
| Cow position: | chr22:9464509-9464914 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 1-521 |
| Cow position: | chr22:1294464-1293961 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 2-286 |
| Cow position: | chr22:1271438-1271155 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 2-448 |
| Cow position: | chr22:6504834-6504382 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 3-494 |
| Cow position: | chr22:5933968-5933488 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 3-494 |
| Cow position: | chr22:44354117-44353634 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 4-278 |
| Cow position: | chr22:45881073-45880799 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 13-516 |
| Cow position: | chr22:16199496-16200000 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 47-286 |
| Cow position: | chr22:46636897-46636663 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 47-430 |
| Cow position: | chr22:41420696-41420325 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 47-495 |
| Cow position: | chr22:328114-327667 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 275, 216 |
| Conread position: | 57-364 |
| Cow position: | chr22:8880321-8880626 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 268, 7 |
| Conread position: | 59-521 |
| Cow position: | chr22:3307649-3307183 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 61-488 |
| Cow position: | chr22:11029741-11030154 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 62-495 |
| Cow position: | chr22:1877881-1878316 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr22:5234253-5233816 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 246, 201 |
| Conread position: | 62-495 |
| Cow position: | chr22:6019881-6020315 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 276 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 268, 174 |
| Conread position: | 62-495 |
| Cow position: | chr22:24948875-24949310 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 201, 112 |
| Conread position: | 62-495 |
| Cow position: | chr22:27310733-27310296 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-495 |
| Cow position: | chr22:44370555-44370133 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 172, 103 |
| Conread position: | 62-502 |
| Cow position: | chr22:44488939-44489383 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 214, 201 |
| Conread position: | 72-494 |
| Cow position: | chr22:10545703-10546130 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 235, 190 |
| Conread position: | 72-495 |
| Cow position: | chr22:6984307-6984735 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 72-495 |
| Cow position: | chr22:10910801-10910374 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 160, 164 |
| Conread position: | 72-495 |
| Cow position: | chr22:18476707-18476280 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 247, 191 |
| Conread position: | 102-495 |
| Cow position: | chr22:37264541-37264934 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 228, 34 |
| Conread position: | 102-521 |
| Cow position: | chr22:1320734-1321163 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 36 |
| Conread position: | 105-489 |
| Cow position: | chr22:526785-526402 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 168 |
| Conread position: | 157-521 |
| Cow position: | chr22:44608821-44609171 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 192-461 |
| Cow position: | chr22:6087860-6087594 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 141, 55 |
| Conread position: | 207-489 |
| Cow position: | chr22:1318657-1318933 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 207-489 |
| Cow position: | chr22:42770797-42771076 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 195, 40 |
| Conread position: | 209-489 |
| Cow position: | chr22:5671989-5672268 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 209-489 |
| Cow position: | chr22:40380446-40380725 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 226-489 |
| Cow position: | chr22:21588579-21588846 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 32 |
| Conread position: | 252-521 |
| Cow position: | chr22:1285670-1285401 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 151 |
| Conread position: | 262-520 |
| Cow position: | chr22:36534679-36534417 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 263-489 |
| Cow position: | chr22:19144425-19144190 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 329-520 |
| Cow position: | chr22:39882815-39882625 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 334-489 |
| Cow position: | chr22:36862362-36862203 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 336-489 |
| Cow position: | chr22:6332064-6332221 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 373-520 |
| Cow position: | chr22:36736169-36736319 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 376-521 |
| Cow position: | chr22:13772174-13772323 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 376-521 |
| Cow position: | chr22:45880724-45880577 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 392-519 |
| Cow position: | chr22:15850743-15850871 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 412-521 |
| Cow position: | chr22:37131087-37131197 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 421-521 |
| Cow position: | chr22:1271070-1270969 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.