Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-174 |
| Cow position: | chr24:35992327-35992153 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 2-515 |
| Cow position: | chr24:16650197-16649696 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 9-232 |
| Cow position: | chr24:17315390-17315166 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 154 |
| Conread position: | 13-495 |
| Cow position: | chr24:7713210-7712725 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 17-495 |
| Cow position: | chr24:6083087-6083564 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 305 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 28-300 |
| Cow position: | chr24:12290227-12289962 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 62-495 |
| Cow position: | chr24:6644547-6644984 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 268, 206 |
| Conread position: | 62-495 |
| Cow position: | chr24:33740213-33739776 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 257, 211 |
| Conread position: | 72-488 |
| Cow position: | chr24:9189590-9189171 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 228, 191 |
| Conread position: | 72-494 |
| Cow position: | chr24:13020843-13021269 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 72-495 |
| Cow position: | chr24:6025957-6025530 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr24:16085540-16085107 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 257, 190 |
| Conread position: | 72-495 |
| Cow position: | chr24:29306682-29306257 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 236, 54 |
| Conread position: | 99-495 |
| Cow position: | chr24:6433401-6433804 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 102, 107 |
| Conread position: | 109-488 |
| Cow position: | chr24:12225279-12224896 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 221, 161 |
| Conread position: | 111-495 |
| Cow position: | chr24:36561025-36560641 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 172-489 |
| Cow position: | chr24:6144632-6144953 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 158, 97 |
| Conread position: | 207-521 |
| Cow position: | chr24:12236358-12236677 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 209-520 |
| Cow position: | chr24:14583427-14583736 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 223-521 |
| Cow position: | chr24:12798436-12798133 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 226-473 |
| Cow position: | chr24:19832713-19832962 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 236-521 |
| Cow position: | chr24:14391385-14391104 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 133, 34 |
| Conread position: | 252-489 |
| Cow position: | chr24:37301696-37301455 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 253-521 |
| Cow position: | chr24:37216071-37216344 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 266-489 |
| Cow position: | chr24:29186166-29186398 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 288-521 |
| Cow position: | chr24:17314924-17314697 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 322-511 |
| Cow position: | chr24:36707051-36707242 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 327-520 |
| Cow position: | chr24:17186988-17187179 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 339-521 |
| Cow position: | chr24:6335126-6335311 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 148 |
| Conread position: | 347-520 |
| Cow position: | chr24:13532073-13531895 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.