Cow genome map


           Conread name:
           rsin14_g1.y1
        

               Conread position:
               1-231
               

               Cow position:
               chr27:25116312-25116538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               62-495
               

               Cow position:
               chr27:2363787-2364224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 200
               

               Conread position:
               118-521
               

               Cow position:
               chr27:26556845-26556446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               123-486
               

               Cow position:
               chr27:25805739-25805373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 147
               

               Conread position:
               195-484
               

               Cow position:
               chr27:25003281-25002995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               207-489
               

               Cow position:
               chr27:27050916-27051197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               207-489
               

               Cow position:
               chr27:27307625-27307905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               207-520
               

               Cow position:
               chr27:16438575-16438886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               162, 40
               

               Conread position:
               240-521
               

               Cow position:
               chr27:15331277-15331546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               395-520
               

               Cow position:
               chr27:15279212-15279087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.