Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-271 |
| Cow position: | chr28:25784582-25784846 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 1-279 |
| Cow position: | chr28:1388301-1388028 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-286 |
| Cow position: | chr28:26006521-26006808 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 1-521 |
| Cow position: | chr28:21358075-21358601 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 4-521 |
| Cow position: | chr28:5811766-5812291 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 364 |
| Conread position: | 4-521 |
| Cow position: | chr28:24666685-24667192 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 5-519 |
| Cow position: | chr28:8722380-8721871 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 86 |
| Conread position: | 14-521 |
| Cow position: | chr28:10620032-10619524 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 228 |
| Conread position: | 22-521 |
| Cow position: | chr28:2990883-2990382 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 49 |
| Conread position: | 27-520 |
| Cow position: | chr28:7816325-7816825 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 118 |
| Conread position: | 56-521 |
| Cow position: | chr28:7791122-7790653 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 349 |
| Conread position: | 62-494 |
| Cow position: | chr28:488577-489014 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 232, 201 |
| Conread position: | 72-495 |
| Cow position: | chr28:6663388-6663816 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 171, 178 |
| Conread position: | 72-495 |
| Cow position: | chr28:13441780-13441352 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 72-495 |
| Cow position: | chr28:15950078-15950506 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 78 |
| Conread position: | 75-482 |
| Cow position: | chr28:17314089-17314489 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 125-521 |
| Cow position: | chr28:21324971-21325368 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 209-520 |
| Cow position: | chr28:4382115-4381802 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 226-488 |
| Cow position: | chr28:26426970-26426710 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 227-489 |
| Cow position: | chr28:1503924-1504193 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 33 |
| Conread position: | 240-489 |
| Cow position: | chr28:5565162-5565413 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 249-472 |
| Cow position: | chr28:9157106-9156878 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 252-489 |
| Cow position: | chr28:15681227-15681466 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 264-520 |
| Cow position: | chr28:5796140-5796401 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 297-489 |
| Cow position: | chr28:5752808-5752608 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 297-489 |
| Cow position: | chr28:33251670-33251871 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 331-489 |
| Cow position: | chr28:9953555-9953716 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 335-521 |
| Cow position: | chr28:1387996-1387814 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 368-511 |
| Cow position: | chr28:25785331-25785471 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 373-507 |
| Cow position: | chr28:26007469-26007605 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.