Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-521 |
| Cow position: | chr4:34186069-34185582 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 4-521 |
| Cow position: | chr4:4168257-4168755 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 17-495 |
| Cow position: | chr4:527727-528208 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 300 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 18-521 |
| Cow position: | chr4:46662967-46663473 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 19-521 |
| Cow position: | chr4:28829825-28830305 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 69 |
| Conread position: | 62-495 |
| Cow position: | chr4:16055368-16055807 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 181, 202 |
| Conread position: | 62-496 |
| Cow position: | chr4:102143-101714 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 62-496 |
| Cow position: | chr4:6269844-6269407 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 268, 201 |
| Conread position: | 72-495 |
| Cow position: | chr4:6566007-6566433 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 258, 120 |
| Conread position: | 72-495 |
| Cow position: | chr4:9311022-9311451 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 171, 178 |
| Conread position: | 72-495 |
| Cow position: | chr4:13546807-13547237 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 249, 190 |
| Conread position: | 72-495 |
| Cow position: | chr4:23115390-23114962 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 171, 185 |
| Conread position: | 72-495 |
| Cow position: | chr4:30308646-30308220 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 258, 66 |
| Conread position: | 72-495 |
| Cow position: | chr4:47765385-47764957 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 222, 200 |
| Conread position: | 84-275 |
| Cow position: | chr4:1465255-1465064 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-521 |
| Cow position: | chr4:21339116-21338711 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 182 |
| Conread position: | 207-520 |
| Cow position: | chr4:66924975-66925287 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 224-489 |
| Cow position: | chr4:13491546-13491813 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 104, 36 |
| Conread position: | 266-489 |
| Cow position: | chr4:48025412-48025646 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 307-488 |
| Cow position: | chr4:3960646-3960835 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 329-519 |
| Cow position: | chr4:1371908-1371717 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 343-489 |
| Cow position: | chr4:36895464-36895614 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.