Cow genome map

Conread name: rsin14_g1.y1

Conread position: 1-277
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 0

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 336
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 44

Conread position: 1-507
Cow position:
Alignm length: 514
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 19

Conread position: 1-521
Cow position:
Alignm length: 528
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-280
Cow position:
Alignm length: 282
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 71

Conread position: 6-495
Cow position:
Alignm length: 498
Alignm identity: 309
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 53

Conread position: 10-521
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 124

Conread position: 12-492
Cow position:
Alignm length: 488
Alignm identity: 306
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 32

Conread position: 15-488
Cow position:
Alignm length: 480
Alignm identity: 290
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 27

Conread position: 44-520
Cow position:
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 100

Conread position: 62-495
Cow position:
Alignm length: 443
Alignm identity: 272
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 206

Conread position: 62-495
Cow position:
Alignm length: 444
Alignm identity: 270
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 268, 201

Conread position: 62-495
Cow position:
Alignm length: 439
Alignm identity: 267
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 269, 198

Conread position: 62-495
Cow position:
Alignm length: 439
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 268, 201

Conread position: 62-516
Cow position:
Alignm length: 457
Alignm identity: 284
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 262, 196

Conread position: 63-495
Cow position:
Alignm length: 439
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 69

Conread position: 72-473
Cow position:
Alignm length: 407
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 258, 191

Conread position: 72-488
Cow position:
Alignm length: 423
Alignm identity: 268
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 216, 66

Conread position: 72-495
Cow position:
Alignm length: 431
Alignm identity: 261
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 178

Conread position: 72-495
Cow position:
Alignm length: 429
Alignm identity: 264
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 258, 191

Conread position: 72-495
Cow position:
Alignm length: 431
Alignm identity: 264
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 219, 71

Conread position: 72-495
Cow position:
Alignm length: 430
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 221, 190

Conread position: 72-495
Cow position:
Alignm length: 431
Alignm identity: 261
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 257, 191

Conread position: 82-521
Cow position:
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 268

Conread position: 116-490
Cow position:
Alignm length: 380
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 44

Conread position: 121-521
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 31

Conread position: 122-402
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 64

Conread position: 123-489
Cow position:
Alignm length: 374
Alignm identity: 248
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 59, 67

Conread position: 160-521
Cow position:
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 44

Conread position: 175-489
Cow position:
Alignm length: 321
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 155, 36

Conread position: 178-495
Cow position:
Alignm length: 320
Alignm identity: 205
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 29

Conread position: 183-514
Cow position:
Alignm length: 340
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 30

Conread position: 195-520
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 54

Conread position: 207-487
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 40

Conread position: 207-489
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 40

Conread position: 207-489
Cow position:
Alignm length: 290
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 15

Conread position: 207-520
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 162, 40

Conread position: 207-521
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 8, 99

Conread position: 209-489
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 38

Conread position: 226-489
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 33

Conread position: 226-489
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 34

Conread position: 227-489
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 33

Conread position: 227-489
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 33

Conread position: 236-496
Cow position:
Alignm length: 264
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 39

Conread position: 250-520
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 55

Conread position: 258-489
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 97

Conread position: 277-489
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 26

Conread position: 329-488
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 329-495
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 340-489
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 395-520
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 424-521
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Show alignments to all cow chromosomes.