Cow genome map

Conread name: rsin14_g1.y1

Conread position: 1-313
Cow position: chr6:4905193-4904883 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 1-521
Cow position: chr6:12093872-12093356 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 86

Conread position: 4-153
Cow position: chr6:26490693-26490846 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 11, 0

Conread position: 10-495
Cow position: chr6:28062322-28062801 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 309
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 36

Conread position: 17-495
Cow position: chr6:68025751-68026231 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 301
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 41

Conread position: 18-521
Cow position: chr6:6477440-6476953 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 78

Conread position: 28-298
Cow position: chr6:65901030-65900767 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 32-495
Cow position: chr6:21837131-21836662 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 298
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 11

Conread position: 47-398
Cow position: chr6:22852920-22852568 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 250

Conread position: 62-489
Cow position: chr6:39907170-39907600 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 269
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 268, 201

Conread position: 62-495
Cow position: chr6:332465-332029 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 281
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 260, 200

Conread position: 62-495
Cow position: chr6:2553727-2554161 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 271
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 268, 61

Conread position: 62-495
Cow position: chr6:7142446-7142015 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 268, 201

Conread position: 62-495
Cow position: chr6:13846084-13846518 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 276
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 308, 61

Conread position: 62-495
Cow position: chr6:17599263-17598831 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 268, 201

Conread position: 62-495
Cow position: chr6:26671852-26671415 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 278
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 268, 201

Conread position: 72-468
Cow position: chr6:65823073-65822674 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 245
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 258, 191

Conread position: 72-495
Cow position: chr6:13977567-13977992 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 260
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 171, 178

Conread position: 72-495
Cow position: chr6:27168601-27169026 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 267
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 258, 37

Conread position: 72-495
Cow position: chr6:44028080-44028507 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 258, 191

Conread position: 79-521
Cow position: chr6:38231332-38231776 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 81

Conread position: 106-495
Cow position: chr6:13942958-13943349 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 252
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 37

Conread position: 122-489
Cow position: chr6:66230928-66231293 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 239
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 73, 67

Conread position: 145-489
Cow position: chr6:62829768-62829422 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 68

Conread position: 146-495
Cow position: chr6:41757887-41757534 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 217
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 111

Conread position: 151-495
Cow position: chr6:6936025-6935675 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 222
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 135

Conread position: 169-495
Cow position: chr6:40314037-40314367 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 154, 15

Conread position: 192-521
Cow position: chr6:47958258-47958584 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 132

Conread position: 207-520
Cow position: chr6:19453137-19453450 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 40

Conread position: 209-489
Cow position: chr6:13275789-13276065 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 160, 36

Conread position: 219-521
Cow position: chr6:11278489-11278187 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 111, 72

Conread position: 226-489
Cow position: chr6:5952025-5951758 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 34

Conread position: 226-489
Cow position: chr6:27530784-27530518 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 34

Conread position: 227-489
Cow position: chr6:15141951-15141693 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 33

Conread position: 236-489
Cow position: chr6:912854-913108 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 21

Conread position: 249-489
Cow position: chr6:42926636-42926880 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 133

Conread position: 266-488
Cow position: chr6:36525292-36525521 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 32

Conread position: 266-489
Cow position: chr6:2111701-2111476 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 33

Conread position: 266-489
Cow position: chr6:24238296-24238528 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 269-489
Cow position: chr6:3489143-3488915 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 30

Conread position: 284-495
Cow position: chr6:65926950-65927162 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 12

Conread position: 325-521
Cow position: chr6:4904741-4904547 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 101

Conread position: 341-489
Cow position: chr6:2401592-2401744 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 355-521
Cow position: chr6:30478424-30478596 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 373-511
Cow position: chr6:37477591-37477732 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.