Cow genome map
| Conread name: | rsin14_g1.y1 |
| Conread position: | 1-217 |
| Cow position: | chr7:21243071-21242857 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 62 |
| Conread position: | 1-278 |
| Cow position: | chr7:20431476-20431197 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-512 |
| Cow position: | chr7:21252144-21251630 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 1-519 |
| Cow position: | chr7:53989836-53990355 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 1-520 |
| Cow position: | chr7:51013044-51013568 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 252 |
| Conread position: | 1-521 |
| Cow position: | chr7:3153863-3154375 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 2-520 |
| Cow position: | chr7:67425456-67425975 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 3-521 |
| Cow position: | chr7:29371671-29371163 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 4-521 |
| Cow position: | chr7:30157208-30156702 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 12-517 |
| Cow position: | chr7:68859236-68858735 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 14-473 |
| Cow position: | chr7:27537309-27536848 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 143 |
| Conread position: | 62-495 |
| Cow position: | chr7:6649550-6649114 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 268, 143 |
| Conread position: | 72-488 |
| Cow position: | chr7:26025177-26025594 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 172, 178 |
| Conread position: | 72-494 |
| Cow position: | chr7:17758-17332 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr7:11467613-11467187 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 258, 191 |
| Conread position: | 72-495 |
| Cow position: | chr7:20554808-20555236 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 221, 190 |
| Conread position: | 72-495 |
| Cow position: | chr7:61558326-61558753 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 221, 164 |
| Conread position: | 76-278 |
| Cow position: | chr7:47048975-47049178 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 101-495 |
| Cow position: | chr7:27102968-27102571 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 221, 162 |
| Conread position: | 123-489 |
| Cow position: | chr7:521309-521681 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 123-489 |
| Cow position: | chr7:24421156-24421532 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 147-521 |
| Cow position: | chr7:68779627-68779263 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 161, 23 |
| Conread position: | 182-487 |
| Cow position: | chr7:5661569-5661872 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 207-520 |
| Cow position: | chr7:68436727-68436419 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 209-487 |
| Cow position: | chr7:35298272-35298000 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 209-516 |
| Cow position: | chr7:26890031-26890344 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 221-492 |
| Cow position: | chr7:63384617-63384890 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 226-488 |
| Cow position: | chr7:34148412-34148674 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 33 |
| Conread position: | 236-489 |
| Cow position: | chr7:51912263-51912008 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 253-489 |
| Cow position: | chr7:67416399-67416639 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 116, 36 |
| Conread position: | 257-521 |
| Cow position: | chr7:35288289-35288026 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 263-489 |
| Cow position: | chr7:14140262-14140026 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 270-521 |
| Cow position: | chr7:48632746-48632999 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 135 |
| Conread position: | 311-495 |
| Cow position: | chr7:7255642-7255831 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 335-511 |
| Cow position: | chr7:49445713-49445888 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 336-521 |
| Cow position: | chr7:21242695-21242508 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 337-494 |
| Cow position: | chr7:47049842-47049999 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 372-520 |
| Cow position: | chr7:993717-993868 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 373-520 |
| Cow position: | chr7:41489592-41489742 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 374-520 |
| Cow position: | chr7:1358217-1358065 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 421-521 |
| Cow position: | chr7:29469360-29469460 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.